RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 TRAF5O00463 557 aa14.37□□□□□ -0.11
BEST3-209ENST00000548658 USP17L8P0C7I0 530 aa14.37□□□□□ -0.11
BEST3-209ENST00000548658 HSPA1AP0DMV8 641 aaKnown RBP14.37□□□□□ -0.11
BEST3-209ENST00000548658 HSPA1BP0DMV9 641 aaKnown RBP14.37□□□□□ -0.11
BEST3-209ENST00000548658 VEGFBP49765 207 aa14.37□□□□□ -0.11
BEST3-209ENST00000548658 ZNF280AP59817 542 aaPredicted RBP14.37□□□□□ -0.11
BEST3-209ENST00000548658 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
BEST3-209ENST00000548658 STRIP1Q5VSL9 837 aa14.37□□□□□ -0.11
BEST3-209ENST00000548658 CST9Q5W186 159 aa14.37□□□□□ -0.11
BEST3-209ENST00000548658 TRMT2AQ8IZ69 625 aaKnown RBP14.37□□□□□ -0.11
BEST3-209ENST00000548658 OGFOD1Q8N543 542 aa14.37□□□□□ -0.11
BEST3-209ENST00000548658 SSH1Q8WYL5 1049 aa14.37□□□□□ -0.11
BEST3-209ENST00000548658 GLIS2Q9BZE0 524 aaPredicted RBP14.37□□□□□ -0.11
BEST3-209ENST00000548658 PCNTO95613 3336 aa14.36□□□□□ -0.11
BEST3-209ENST00000548658 SHTN1A0MZ66 631 aa14.36□□□□□ -0.11
BEST3-209ENST00000548658 CELF2O95319 508 aaKnown RBP14.36□□□□□ -0.11
BEST3-209ENST00000548658 KIF4BQ2VIQ3 1234 aa14.36□□□□□ -0.11
BEST3-209ENST00000548658 RBM26Q5T8P6 1007 aaKnown RBP14.36□□□□□ -0.11
BEST3-209ENST00000548658 LDHAL6AQ6ZMR3 332 aa14.36□□□□□ -0.11
BEST3-209ENST00000548658 CDCA7LQ96GN5 454 aa14.36□□□□□ -0.11
BEST3-209ENST00000548658 HHIPL1Q96JK4 782 aa14.36□□□□□ -0.11
BEST3-209ENST00000548658 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
BEST3-209ENST00000548658 UTYO14607 1347 aa14.36□□□□□ -0.11
BEST3-209ENST00000548658 IFFO2Q5TF58 517 aa14.35□□□□□ -0.11
BEST3-209ENST00000548658 C15orf52Q6ZUT6 534 aaKnown RBP14.35□□□□□ -0.11
BEST3-209ENST00000548658 KRT26Q7Z3Y9 468 aa14.35□□□□□ -0.11
BEST3-209ENST00000548658 SULF1Q8IWU6 871 aa14.35□□□□□ -0.11
BEST3-209ENST00000548658 GMLQ99445 158 aa14.35□□□□□ -0.11
BEST3-209ENST00000548658 CNNM1Q9NRU3 951 aa14.35□□□□□ -0.11
BEST3-209ENST00000548658 TRPM7Q96QT4 1865 aa14.35□□□□□ -0.11
BEST3-209ENST00000548658 WDR33Q9C0J8 1336 aaKnown RBP14.35□□□□□ -0.11
BEST3-209ENST00000548658 SCN9AQ15858 1988 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 WTIPA6NIX2 430 aaPredicted RBP14.34□□□□□ -0.11
BEST3-209ENST00000548658 NBPF7P0C2Y1 421 aaPredicted RBP14.34□□□□□ -0.11
BEST3-209ENST00000548658 DSG3P32926 999 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
BEST3-209ENST00000548658 EPHA10Q5JZY3 1008 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 TTLL5Q6EMB2 1281 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 PAXIP1Q6ZW49 1069 aaPredicted RBP14.34□□□□□ -0.11
BEST3-209ENST00000548658 SAPCD2Q86UD0 394 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 USP48Q86UV5 1035 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 AIDAQ96BJ3 306 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 MYOZ2Q9NPC6 264 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 SMC4Q9NTJ3 1288 aa14.34□□□□□ -0.11
BEST3-209ENST00000548658 EGFRP00533 1210 aa14.33□□□□□ -0.12
BEST3-209ENST00000548658 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
BEST3-209ENST00000548658 DACT2Q5SW24 774 aa14.33□□□□□ -0.12
BEST3-209ENST00000548658 ZNF804AQ7Z570 1209 aa14.33□□□□□ -0.12
BEST3-209ENST00000548658 TXNRD3Q86VQ6 643 aa14.33□□□□□ -0.12
BEST3-209ENST00000548658 ZNF408Q9H9D4 720 aa14.33□□□□□ -0.12
BEST3-209ENST00000548658 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.12
BEST3-209ENST00000548658 SPEF2Q9C093 1822 aa14.33□□□□□ -0.12
BEST3-209ENST00000548658 PSME4Q14997 1843 aa14.32□□□□□ -0.12
BEST3-209ENST00000548658 TAF5LO75529 589 aa14.32□□□□□ -0.12
BEST3-209ENST00000548658 BRPF1P55201 1214 aaPredicted RBP14.32□□□□□ -0.12
BEST3-209ENST00000548658 SCARF1Q14162 830 aa14.32□□□□□ -0.12
BEST3-209ENST00000548658 RABL6Q3YEC7 729 aaPredicted RBP14.32□□□□□ -0.12
BEST3-209ENST00000548658 FBXW7Q969H0 707 aa14.32□□□□□ -0.12
BEST3-209ENST00000548658 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
BEST3-209ENST00000548658 CAPNS2Q96L46 248 aa14.32□□□□□ -0.12
BEST3-209ENST00000548658 CD209Q9NNX6 404 aa14.32□□□□□ -0.12
BEST3-209ENST00000548658 HDAC9Q9UKV0 1011 aa14.32□□□□□ -0.12
BEST3-209ENST00000548658 ABCB7O75027 752 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 MAP2K2P36507 400 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 UBE4AQ14139 1066 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 C2orf69Q8N8R5 385 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 HELBQ8NG08 1087 aaPredicted RBP14.31□□□□□ -0.12
BEST3-209ENST00000548658 KAZALD1Q96I82 304 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 ZNF594Q96JF6 807 aaPredicted RBP14.31□□□□□ -0.12
BEST3-209ENST00000548658 BEGAINQ9BUH8 593 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 USP44Q9H0E7 712 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 BICC1Q9H694 974 aaKnown RBP14.31□□□□□ -0.12
BEST3-209ENST00000548658 WBP1LQ9NX94 342 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 GGA3Q9NZ52 723 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 MROH5Q6ZUA9 1318 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 PITPNM2Q9BZ72 1349 aa14.31□□□□□ -0.12
BEST3-209ENST00000548658 PLIN1O60240 522 aa14.3□□□□□ -0.12
BEST3-209ENST00000548658 GTF2IP78347 998 aa14.3□□□□□ -0.12
BEST3-209ENST00000548658 ANGEL2Q5VTE6 544 aaKnown RBP14.3□□□□□ -0.12
BEST3-209ENST00000548658 DIEXFQ68CQ4 756 aaKnown RBP14.3□□□□□ -0.12
BEST3-209ENST00000548658 API5Q9BZZ5 524 aaKnown RBP14.3□□□□□ -0.12
BEST3-209ENST00000548658 IL1R1P14778 569 aa14.29□□□□□ -0.12
BEST3-209ENST00000548658 KLRK1P26718 216 aa14.29□□□□□ -0.12
BEST3-209ENST00000548658 CTCFP49711 727 aaPredicted RBP14.29□□□□□ -0.12
BEST3-209ENST00000548658 COL13A1Q5TAT6 717 aaPredicted RBP14.29□□□□□ -0.12
BEST3-209ENST00000548658 CYP4F22Q6NT55 531 aa14.29□□□□□ -0.12
BEST3-209ENST00000548658 ARHGAP45Q92619 1136 aa14.29□□□□□ -0.12
BEST3-209ENST00000548658 GBA2Q9HCG7 927 aaPredicted RBP14.29□□□□□ -0.12
BEST3-209ENST00000548658 ADM5C9JUS6 153 aa14.28□□□□□ -0.12
BEST3-209ENST00000548658 SASH1O94885 1247 aa14.28□□□□□ -0.12
BEST3-209ENST00000548658 POLR2AP24928 1970 aaKnown RBP14.28□□□□□ -0.12
BEST3-209ENST00000548658 HUNKP57058 714 aa14.28□□□□□ -0.12
BEST3-209ENST00000548658 FKBP1AP62942 108 aaKnown RBP14.28□□□□□ -0.12
BEST3-209ENST00000548658 FKBP1BP68106 108 aa14.28□□□□□ -0.12
BEST3-209ENST00000548658 GRM1Q13255 1194 aa14.28□□□□□ -0.12
BEST3-209ENST00000548658 PRDM10Q9NQV6 1147 aa14.28□□□□□ -0.12
BEST3-209ENST00000548658 NOB1Q9ULX3 412 aaKnown RBP14.28□□□□□ -0.12
BEST3-209ENST00000548658 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
BEST3-209ENST00000548658 IRS2Q9Y4H2 1338 aa14.28□□□□□ -0.12
BEST3-209ENST00000548658 KIF16BQ96L93 1317 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms