RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 DCPSQ96C86 337 aaKnown RBP22.19■■□□□ 1.14
CHMP1A-205ENST00000548650 USP17L3A6NCW0 530 aa22.18■■□□□ 1.14
CHMP1A-205ENST00000548650 USP17L4A6NCW7 530 aa22.18■■□□□ 1.14
CHMP1A-205ENST00000548650 F6X3S4 739 aa22.18■■□□□ 1.14
CHMP1A-205ENST00000548650 USP17L1Q7RTZ2 530 aa22.18■■□□□ 1.14
CHMP1A-205ENST00000548650 ZNF521Q96K83 1311 aa22.17■■□□□ 1.14
CHMP1A-205ENST00000548650 BEND3Q5T5X7 828 aa22.17■■□□□ 1.14
CHMP1A-205ENST00000548650 USP17L8P0C7I0 530 aa22.16■■□□□ 1.14
CHMP1A-205ENST00000548650 KLRK1P26718 216 aa22.16■■□□□ 1.14
CHMP1A-205ENST00000548650 HUNKP57058 714 aa22.16■■□□□ 1.14
CHMP1A-205ENST00000548650 TXNRD3Q86VQ6 643 aa22.16■■□□□ 1.14
CHMP1A-205ENST00000548650 GBA2Q9HCG7 927 aaPredicted RBP22.16■■□□□ 1.14
CHMP1A-205ENST00000548650 LEMD3Q9Y2U8 911 aa22.16■■□□□ 1.14
CHMP1A-205ENST00000548650 PAPPA2Q9BXP8 1791 aa22.16■■□□□ 1.14
CHMP1A-205ENST00000548650 ZNF804BA4D1E1 1349 aa22.15■■□□□ 1.14
CHMP1A-205ENST00000548650 BRPF1P55201 1214 aaPredicted RBP22.15■■□□□ 1.14
CHMP1A-205ENST00000548650 DACT2Q5SW24 774 aa22.15■■□□□ 1.14
CHMP1A-205ENST00000548650 ANGEL2Q5VTE6 544 aaKnown RBP22.15■■□□□ 1.14
CHMP1A-205ENST00000548650 SULF1Q8IWU6 871 aa22.15■■□□□ 1.14
CHMP1A-205ENST00000548650 BEGAINQ9BUH8 593 aa22.15■■□□□ 1.14
CHMP1A-205ENST00000548650 COA1Q9GZY4 146 aa22.15■■□□□ 1.14
CHMP1A-205ENST00000548650 MYOZ2Q9NPC6 264 aa22.15■■□□□ 1.14
CHMP1A-205ENST00000548650 FOXO4P98177 505 aa22.14■■□□□ 1.13
CHMP1A-205ENST00000548650 MPHOSPH8Q99549 860 aa22.14■■□□□ 1.13
CHMP1A-205ENST00000548650 ANKRD2Q9GZV1 360 aa22.14■■□□□ 1.13
CHMP1A-205ENST00000548650 NOGQ13253 232 aa22.13■■□□□ 1.13
CHMP1A-205ENST00000548650 SCARF1Q14162 830 aa22.13■■□□□ 1.13
CHMP1A-205ENST00000548650 CDCA5Q96FF9 252 aa22.13■■□□□ 1.13
CHMP1A-205ENST00000548650 MXD3Q9BW11 206 aa22.13■■□□□ 1.13
CHMP1A-205ENST00000548650 PITPNM2Q9BZ72 1349 aa22.12■■□□□ 1.13
CHMP1A-205ENST00000548650 IRS2Q9Y4H2 1338 aa22.12■■□□□ 1.13
CHMP1A-205ENST00000548650 ANKRD18BA2A2Z9 1011 aa22.12■■□□□ 1.13
CHMP1A-205ENST00000548650 CHRNDQ07001 517 aa22.12■■□□□ 1.13
CHMP1A-205ENST00000548650 STRIP1Q5VSL9 837 aa22.12■■□□□ 1.13
CHMP1A-205ENST00000548650 ZIC5Q96T25 663 aa22.12■■□□□ 1.13
CHMP1A-205ENST00000548650 TSKSQ9UJT2 592 aa22.12■■□□□ 1.13
CHMP1A-205ENST00000548650 MYO3BQ8WXR4 1341 aa22.11■■□□□ 1.13
CHMP1A-205ENST00000548650 FAM155AB1AL88 458 aaPredicted RBP22.11■■□□□ 1.13
CHMP1A-205ENST00000548650 GRM8O00222 908 aa22.11■■□□□ 1.13
CHMP1A-205ENST00000548650 RGMBQ6NW40 437 aa22.11■■□□□ 1.13
CHMP1A-205ENST00000548650 C2orf69Q8N8R5 385 aa22.11■■□□□ 1.13
CHMP1A-205ENST00000548650 ECM29Q5VYK3 1845 aa22.1■■□□□ 1.13
CHMP1A-205ENST00000548650 CA12O43570 354 aa22.1■■□□□ 1.13
CHMP1A-205ENST00000548650 EPHA10Q5JZY3 1008 aa22.1■■□□□ 1.13
CHMP1A-205ENST00000548650 FBXW7Q969H0 707 aa22.1■■□□□ 1.13
CHMP1A-205ENST00000548650 CASP8AP2Q9UKL3 1982 aa22.09■■□□□ 1.13
CHMP1A-205ENST00000548650 IFIT5Q13325 482 aaKnown RBP22.09■■□□□ 1.13
CHMP1A-205ENST00000548650 SNAP23O00161 211 aa22.08■■□□□ 1.13
CHMP1A-205ENST00000548650 KCNJ4P48050 445 aa22.08■■□□□ 1.13
CHMP1A-205ENST00000548650 NBPF9Q3BBW0 867 aa22.08■■□□□ 1.13
CHMP1A-205ENST00000548650 LMBR1LQ6UX01 489 aa22.08■■□□□ 1.13
CHMP1A-205ENST00000548650 CHMP3Q9Y3E7 222 aa22.08■■□□□ 1.13
CHMP1A-205ENST00000548650 ARAP2Q8WZ64 1704 aa22.08■■□□□ 1.12
CHMP1A-205ENST00000548650 AKAP11Q9UKA4 1901 aa22.08■■□□□ 1.12
CHMP1A-205ENST00000548650 ALDH1L1O75891 902 aa22.07■■□□□ 1.12
CHMP1A-205ENST00000548650 C15orf52Q6ZUT6 534 aaKnown RBP22.07■■□□□ 1.12
CHMP1A-205ENST00000548650 WNT10BO00744 389 aa22.06■■□□□ 1.12
CHMP1A-205ENST00000548650 TAF5LO75529 589 aa22.06■■□□□ 1.12
CHMP1A-205ENST00000548650 OGFOD1Q8N543 542 aa22.06■■□□□ 1.12
CHMP1A-205ENST00000548650 HELBQ8NG08 1087 aaPredicted RBP22.06■■□□□ 1.12
CHMP1A-205ENST00000548650 SCAF8Q9UPN6 1271 aaKnown RBP22.06■■□□□ 1.12
CHMP1A-205ENST00000548650 SASH1O94885 1247 aa22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 SLC10A3P09131 477 aa22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 ZNF157P51786 506 aaPredicted RBP22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 GTF2IP78347 998 aa22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 TTLL5Q6EMB2 1281 aa22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 SLC4A10Q6U841 1118 aa22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 CCDC102AQ96A19 550 aa22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 SRCIN1Q9C0H9 1055 aa22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 CD209Q9NNX6 404 aa22.05■■□□□ 1.12
CHMP1A-205ENST00000548650 FKBP1BP68106 108 aa22.04■■□□□ 1.12
CHMP1A-205ENST00000548650 KIAA0825Q8IV33 1275 aa22.04■■□□□ 1.12
CHMP1A-205ENST00000548650 ABHD8Q96I13 439 aa22.04■■□□□ 1.12
CHMP1A-205ENST00000548650 ZNF594Q96JF6 807 aaPredicted RBP22.04■■□□□ 1.12
CHMP1A-205ENST00000548650 C9orf78Q9NZ63 289 aaPredicted RBP22.04■■□□□ 1.12
CHMP1A-205ENST00000548650 MMP14P50281 582 aa22.03■■□□□ 1.12
CHMP1A-205ENST00000548650 CCDC57Q2TAC2 916 aa22.03■■□□□ 1.12
CHMP1A-205ENST00000548650 RASAL3Q86YV0 1011 aa22.03■■□□□ 1.12
CHMP1A-205ENST00000548650 CERS5Q8N5B7 392 aa22.03■■□□□ 1.12
CHMP1A-205ENST00000548650 KAZALD1Q96I82 304 aa22.03■■□□□ 1.12
CHMP1A-205ENST00000548650 KIF23Q02241 960 aaPredicted RBP22.02■■□□□ 1.12
CHMP1A-205ENST00000548650 SUCLG2Q96I99 432 aa22.02■■□□□ 1.12
CHMP1A-205ENST00000548650 ZBED3Q96IU2 234 aaPredicted RBP22.02■■□□□ 1.12
CHMP1A-205ENST00000548650 UTYO14607 1347 aa22.02■■□□□ 1.12
CHMP1A-205ENST00000548650 IL1R1P14778 569 aa22.01■■□□□ 1.11
CHMP1A-205ENST00000548650 TAF7LQ5H9L4 462 aa22.01■■□□□ 1.11
CHMP1A-205ENST00000548650 LDHAL6AQ6ZMR3 332 aa22.01■■□□□ 1.11
CHMP1A-205ENST00000548650 MRPL50Q8N5N7 158 aaKnown RBP22.01■■□□□ 1.11
CHMP1A-205ENST00000548650 COL1A1P02452 1464 aaPredicted RBP22.01■■□□□ 1.11
CHMP1A-205ENST00000548650 E9PSI1 815 aa22■■□□□ 1.11
CHMP1A-205ENST00000548650 NBPF7P0C2Y1 421 aaPredicted RBP22■■□□□ 1.11
CHMP1A-205ENST00000548650 PRAMEF18Q5VWM3 479 aa22■■□□□ 1.11
CHMP1A-205ENST00000548650 MOB2Q70IA6 237 aa22■■□□□ 1.11
CHMP1A-205ENST00000548650 ZNF804AQ7Z570 1209 aa22■■□□□ 1.11
CHMP1A-205ENST00000548650 SAGE1Q9NXZ1 904 aa22■■□□□ 1.11
CHMP1A-205ENST00000548650 HDAC9Q9UKV0 1011 aa22■■□□□ 1.11
CHMP1A-205ENST00000548650 CNNM1Q9NRU3 951 aa21.99■■□□□ 1.11
CHMP1A-205ENST00000548650 APOBEC3FQ8IUX4 373 aaKnown RBP21.98■■□□□ 1.11
CHMP1A-205ENST00000548650 PTPRCP08575 1304 aa21.98■■□□□ 1.11
CHMP1A-205ENST00000548650 RABL6Q3YEC7 729 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms