RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PCDHA7Q9UN72 937 aa26.92■■□□□ 1.9
NPAS3-206ENST00000548645 TBX22Q9Y458 520 aa26.92■■□□□ 1.9
NPAS3-206ENST00000548645 AIMP1Q12904 312 aaKnown RBP26.91■■□□□ 1.9
NPAS3-206ENST00000548645 CHMP4CQ96CF2 233 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 ST7Q9NRC1 585 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 IFNKQ9P0W0 207 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 A0A1W2PQ27 194 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 A0A1W2PQ64 194 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 A0A1W2PQD8 194 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 APOBRQ0VD83 1088 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 STOX1Q6ZVD7 989 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 SEC62Q99442 399 aaKnown RBP26.91■■□□□ 1.9
NPAS3-206ENST00000548645 KIAA1468Q9P260 1216 aa26.91■■□□□ 1.9
NPAS3-206ENST00000548645 AMOTQ4VCS5 1084 aa26.9■■□□□ 1.9
NPAS3-206ENST00000548645 C1orf141Q5JVX7 400 aa26.9■■□□□ 1.9
NPAS3-206ENST00000548645 ERICH4A6NGS2 130 aa26.9■■□□□ 1.9
NPAS3-206ENST00000548645 CCP110O43303 1012 aa26.9■■□□□ 1.9
NPAS3-206ENST00000548645 TNNI3KQ59H18 835 aa26.9■■□□□ 1.9
NPAS3-206ENST00000548645 BBXQ8WY36 941 aaPredicted RBP26.9■■□□□ 1.9
NPAS3-206ENST00000548645 FHOD1Q9Y613 1164 aa26.9■■□□□ 1.9
NPAS3-206ENST00000548645 FPGT-TNNI3KV9GXZ4 949 aa26.9■■□□□ 1.9
NPAS3-206ENST00000548645 IGKV5-2P06315 115 aa26.89■■□□□ 1.9
NPAS3-206ENST00000548645 CLCN6P51797 869 aa26.89■■□□□ 1.9
NPAS3-206ENST00000548645 NEXNQ0ZGT2 675 aa26.89■■□□□ 1.9
NPAS3-206ENST00000548645 RIC3Q7Z5B4 369 aa26.89■■□□□ 1.9
NPAS3-206ENST00000548645 COPRSQ9NQ92 184 aa26.89■■□□□ 1.9
NPAS3-206ENST00000548645 TMEM51Q9NW97 253 aa26.89■■□□□ 1.9
NPAS3-206ENST00000548645 RTEL1Q9NZ71 1219 aa26.89■■□□□ 1.9
NPAS3-206ENST00000548645 CCT2P78371 535 aaKnown RBP26.89■■□□□ 1.9
NPAS3-206ENST00000548645 DNAJC2Q99543 621 aaKnown RBP26.89■■□□□ 1.9
NPAS3-206ENST00000548645 SALL1Q9NSC2 1324 aa26.89■■□□□ 1.89
NPAS3-206ENST00000548645 PRAMEF22A3QJZ6 481 aa26.89■■□□□ 1.89
NPAS3-206ENST00000548645 DPCR1Q3MIW9 517 aa26.89■■□□□ 1.89
NPAS3-206ENST00000548645 AGXT2Q9BYV1 514 aa26.89■■□□□ 1.89
NPAS3-206ENST00000548645 ARHGAP29Q52LW3 1261 aa26.88■■□□□ 1.89
NPAS3-206ENST00000548645 ILDR1Q86SU0 546 aaPredicted RBP26.88■■□□□ 1.89
NPAS3-206ENST00000548645 ARGLU1Q9NWB6 273 aaPredicted RBP26.88■■□□□ 1.89
NPAS3-206ENST00000548645 A0A1B0GVL5 298 aa26.88■■□□□ 1.89
NPAS3-206ENST00000548645 LTN1O94822 1766 aa26.87■■□□□ 1.89
NPAS3-206ENST00000548645 GUCY1B3Q02153 619 aa26.87■■□□□ 1.89
NPAS3-206ENST00000548645 HOMER1Q86YM7 354 aa26.87■■□□□ 1.89
NPAS3-206ENST00000548645 EXOSC10Q01780 885 aaKnown RBP26.87■■□□□ 1.89
NPAS3-206ENST00000548645 SF3A1Q15459 793 aaKnown RBP26.87■■□□□ 1.89
NPAS3-206ENST00000548645 HAUS7Q99871 368 aa26.87■■□□□ 1.89
NPAS3-206ENST00000548645 OVOS2A0A0G2JMS6 1433 aa26.87■■□□□ 1.89
NPAS3-206ENST00000548645 NDUFA8P51970 172 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 PNMA6AP0CW24 399 aaPredicted RBP26.86■■□□□ 1.89
NPAS3-206ENST00000548645 CYP2C19P33261 490 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 ETF1P62495 437 aaKnown RBP26.86■■□□□ 1.89
NPAS3-206ENST00000548645 NAP1L2Q9ULW6 460 aaPredicted RBP26.86■■□□□ 1.89
NPAS3-206ENST00000548645 NDUFB9Q9Y6M9 179 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 PHLPP2Q6ZVD8 1323 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 SH3TC1Q8TE82 1336 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 NEURL1BA8MQ27 555 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 TFCP2Q12800 502 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 LRRN4CLQ8ND94 238 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 UBXN4Q92575 508 aa26.86■■□□□ 1.89
NPAS3-206ENST00000548645 ZNF274Q96GC6 653 aaPredicted RBP26.86■■□□□ 1.89
NPAS3-206ENST00000548645 GCKRQ14397 625 aa26.85■■□□□ 1.89
NPAS3-206ENST00000548645 EPHA10Q5JZY3 1008 aa26.85■■□□□ 1.89
NPAS3-206ENST00000548645 NCOA5Q9HCD5 579 aaKnown RBP26.85■■□□□ 1.89
NPAS3-206ENST00000548645 CHGBP05060 677 aa26.85■■□□□ 1.89
NPAS3-206ENST00000548645 STK38Q15208 465 aa26.85■■□□□ 1.89
NPAS3-206ENST00000548645 KCNG4Q8TDN1 519 aa26.85■■□□□ 1.89
NPAS3-206ENST00000548645 GTF2E1P29083 439 aaPredicted RBP26.84■■□□□ 1.89
NPAS3-206ENST00000548645 NLRP12P59046 1061 aa26.84■■□□□ 1.89
NPAS3-206ENST00000548645 SYTL4Q96C24 671 aaPredicted RBP26.84■■□□□ 1.89
NPAS3-206ENST00000548645 SRRTQ9BXP5 876 aaKnown RBP26.84■■□□□ 1.89
NPAS3-206ENST00000548645 CARMIL3Q8ND23 1372 aa26.84■■□□□ 1.89
NPAS3-206ENST00000548645 SLC3A2P08195 630 aaKnown RBP26.84■■□□□ 1.89
NPAS3-206ENST00000548645 TMCO3Q6UWJ1 677 aa26.84■■□□□ 1.89
NPAS3-206ENST00000548645 LINC00301Q8NCQ3 95 aa26.84■■□□□ 1.89
NPAS3-206ENST00000548645 ABCC6O95255 1503 aa26.84■■□□□ 1.89
NPAS3-206ENST00000548645 DDX46Q7L014 1031 aaKnown RBP26.83■■□□□ 1.89
NPAS3-206ENST00000548645 KBTBD3Q8NAB2 608 aa26.83■■□□□ 1.89
NPAS3-206ENST00000548645 PDIA3P30101 505 aaKnown RBP26.83■■□□□ 1.89
NPAS3-206ENST00000548645 DSCC1Q9BVC3 393 aa26.83■■□□□ 1.89
NPAS3-206ENST00000548645 IRX5P78411 483 aaPredicted RBP26.83■■□□□ 1.88
NPAS3-206ENST00000548645 PDIA6Q15084 440 aa26.83■■□□□ 1.88
NPAS3-206ENST00000548645 FMNL2Q96PY5 1086 aa26.83■■□□□ 1.88
NPAS3-206ENST00000548645 LRRC59Q96AG4 307 aaKnown RBP26.82■■□□□ 1.88
NPAS3-206ENST00000548645 DBNDD2Q9BQY9 259 aa26.82■■□□□ 1.88
NPAS3-206ENST00000548645 ORC3Q9UBD5 711 aaPredicted RBP26.82■■□□□ 1.88
NPAS3-206ENST00000548645 DNAI1Q9UI46 699 aa26.82■■□□□ 1.88
NPAS3-206ENST00000548645 ZRANB2O95218 330 aaKnown RBP eCLIP26.82■■□□□ 1.88
NPAS3-206ENST00000548645 YEATS4O95619 227 aa26.82■■□□□ 1.88
NPAS3-206ENST00000548645 CDK11BP21127 795 aaKnown RBP26.82■■□□□ 1.88
NPAS3-206ENST00000548645 PLA2G4AP47712 749 aa26.82■■□□□ 1.88
NPAS3-206ENST00000548645 PTPN12Q05209 780 aaKnown RBP26.82■■□□□ 1.88
NPAS3-206ENST00000548645 MNS1Q8NEH6 495 aa26.81■■□□□ 1.88
NPAS3-206ENST00000548645 HELLSQ9NRZ9 838 aa26.81■■□□□ 1.88
NPAS3-206ENST00000548645 LAMA4Q16363 1823 aa26.81■■□□□ 1.88
NPAS3-206ENST00000548645 RFX5P48382 616 aaPredicted RBP26.81■■□□□ 1.88
NPAS3-206ENST00000548645 TEX35Q5T0J7 233 aa26.81■■□□□ 1.88
NPAS3-206ENST00000548645 TPM1P09493 284 aa26.8■■□□□ 1.88
NPAS3-206ENST00000548645 NCAPHQ15003 741 aa26.8■■□□□ 1.88
NPAS3-206ENST00000548645 GORABQ5T7V8 394 aa26.8■■□□□ 1.88
NPAS3-206ENST00000548645 POLR3EQ9NVU0 708 aa26.8■■□□□ 1.88
NPAS3-206ENST00000548645 SETD1BQ9UPS6 1966 aaKnown RBP26.8■■□□□ 1.88
NPAS3-206ENST00000548645 E7EWF7 191 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms