RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 USP17L1Q7RTZ2 530 aa20.46■□□□□ 0.87
RAPGEF3-217ENST00000548434 KRT26Q7Z3Y9 468 aa20.46■□□□□ 0.87
RAPGEF3-217ENST00000548434 ADM5C9JUS6 153 aa20.45■□□□□ 0.86
RAPGEF3-217ENST00000548434 RBM26Q5T8P6 1007 aaKnown RBP20.45■□□□□ 0.86
RAPGEF3-217ENST00000548434 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
RAPGEF3-217ENST00000548434 ZIC5Q96T25 663 aa20.45■□□□□ 0.86
RAPGEF3-217ENST00000548434 FAM155AB1AL88 458 aaPredicted RBP20.44■□□□□ 0.86
RAPGEF3-217ENST00000548434 C15orf52Q6ZUT6 534 aaKnown RBP20.44■□□□□ 0.86
RAPGEF3-217ENST00000548434 MXD3Q9BW11 206 aa20.44■□□□□ 0.86
RAPGEF3-217ENST00000548434 SNAP23O00161 211 aa20.43■□□□□ 0.86
RAPGEF3-217ENST00000548434 IGHMBP2P38935 993 aaKnown RBP20.43■□□□□ 0.86
RAPGEF3-217ENST00000548434 CHRNDQ07001 517 aa20.43■□□□□ 0.86
RAPGEF3-217ENST00000548434 SCARF1Q14162 830 aa20.43■□□□□ 0.86
RAPGEF3-217ENST00000548434 COA1Q9GZY4 146 aa20.43■□□□□ 0.86
RAPGEF3-217ENST00000548434 ZNF804BA4D1E1 1349 aa20.43■□□□□ 0.86
RAPGEF3-217ENST00000548434 USP17L8P0C7I0 530 aa20.42■□□□□ 0.86
RAPGEF3-217ENST00000548434 STRIP1Q5VSL9 837 aa20.42■□□□□ 0.86
RAPGEF3-217ENST00000548434 ANKRD2Q9GZV1 360 aa20.42■□□□□ 0.86
RAPGEF3-217ENST00000548434 MYOZ2Q9NPC6 264 aa20.42■□□□□ 0.86
RAPGEF3-217ENST00000548434 GGA3Q9NZ52 723 aa20.42■□□□□ 0.86
RAPGEF3-217ENST00000548434 GRM8O00222 908 aa20.41■□□□□ 0.86
RAPGEF3-217ENST00000548434 ALDH1L1O75891 902 aa20.41■□□□□ 0.86
RAPGEF3-217ENST00000548434 AIDAQ96BJ3 306 aa20.41■□□□□ 0.86
RAPGEF3-217ENST00000548434 DCPSQ96C86 337 aaKnown RBP20.41■□□□□ 0.86
RAPGEF3-217ENST00000548434 ZBED3Q96IU2 234 aaPredicted RBP20.41■□□□□ 0.86
RAPGEF3-217ENST00000548434 ZNF408Q9H9D4 720 aa20.41■□□□□ 0.86
RAPGEF3-217ENST00000548434 UTYO14607 1347 aa20.41■□□□□ 0.86
RAPGEF3-217ENST00000548434 G3V3G9 751 aa20.4■□□□□ 0.86
RAPGEF3-217ENST00000548434 DCAF8Q5TAQ9 597 aa20.4■□□□□ 0.86
RAPGEF3-217ENST00000548434 LMBR1LQ6UX01 489 aa20.4■□□□□ 0.86
RAPGEF3-217ENST00000548434 TRMT2AQ8IZ69 625 aaKnown RBP20.4■□□□□ 0.86
RAPGEF3-217ENST00000548434 MRPL50Q8N5N7 158 aaKnown RBP20.4■□□□□ 0.86
RAPGEF3-217ENST00000548434 PITPNM2Q9BZ72 1349 aa20.4■□□□□ 0.86
RAPGEF3-217ENST00000548434 CASP8AP2Q9UKL3 1982 aa20.39■□□□□ 0.86
RAPGEF3-217ENST00000548434 ANKRD18BA2A2Z9 1011 aa20.39■□□□□ 0.85
RAPGEF3-217ENST00000548434 BRPF1P55201 1214 aaPredicted RBP20.39■□□□□ 0.85
RAPGEF3-217ENST00000548434 ANGEL2Q5VTE6 544 aaKnown RBP20.39■□□□□ 0.85
RAPGEF3-217ENST00000548434 GBA2Q9HCG7 927 aaPredicted RBP20.39■□□□□ 0.85
RAPGEF3-217ENST00000548434 HUNKP57058 714 aa20.38■□□□□ 0.85
RAPGEF3-217ENST00000548434 SLFN5Q08AF3 891 aa20.38■□□□□ 0.85
RAPGEF3-217ENST00000548434 NBPF9Q3BBW0 867 aa20.38■□□□□ 0.85
RAPGEF3-217ENST00000548434 HELBQ8NG08 1087 aaPredicted RBP20.38■□□□□ 0.85
RAPGEF3-217ENST00000548434 CDCA5Q96FF9 252 aa20.38■□□□□ 0.85
RAPGEF3-217ENST00000548434 MPHOSPH8Q99549 860 aa20.38■□□□□ 0.85
RAPGEF3-217ENST00000548434 WNT10BO00744 389 aa20.37■□□□□ 0.85
RAPGEF3-217ENST00000548434 TAF5LO75529 589 aa20.37■□□□□ 0.85
RAPGEF3-217ENST00000548434 IFIT5Q13325 482 aaKnown RBP20.37■□□□□ 0.85
RAPGEF3-217ENST00000548434 TTLL5Q6EMB2 1281 aa20.37■□□□□ 0.85
RAPGEF3-217ENST00000548434 CERS5Q8N5B7 392 aa20.37■□□□□ 0.85
RAPGEF3-217ENST00000548434 ZNF594Q96JF6 807 aaPredicted RBP20.37■□□□□ 0.85
RAPGEF3-217ENST00000548434 CD209Q9NNX6 404 aa20.37■□□□□ 0.85
RAPGEF3-217ENST00000548434 NBPF7P0C2Y1 421 aaPredicted RBP20.36■□□□□ 0.85
RAPGEF3-217ENST00000548434 IL1R1P14778 569 aa20.36■□□□□ 0.85
RAPGEF3-217ENST00000548434 RGMBQ6NW40 437 aa20.36■□□□□ 0.85
RAPGEF3-217ENST00000548434 PAXIP1Q6ZW49 1069 aaPredicted RBP20.36■□□□□ 0.85
RAPGEF3-217ENST00000548434 SULF1Q8IWU6 871 aa20.36■□□□□ 0.85
RAPGEF3-217ENST00000548434 SUCLG2Q96I99 432 aa20.36■□□□□ 0.85
RAPGEF3-217ENST00000548434 MYO3BQ8WXR4 1341 aa20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 MMP14P50281 582 aa20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 NOGQ13253 232 aa20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 GRM1Q13255 1194 aa20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 RABL6Q3YEC7 729 aaPredicted RBP20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 C2orf69Q8N8R5 385 aa20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 SRCIN1Q9C0H9 1055 aa20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 SCAF8Q9UPN6 1271 aaKnown RBP20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 PAPPA2Q9BXP8 1791 aa20.35■□□□□ 0.85
RAPGEF3-217ENST00000548434 E9PSI1 815 aa20.34■□□□□ 0.85
RAPGEF3-217ENST00000548434 SSH1Q8WYL5 1049 aa20.34■□□□□ 0.85
RAPGEF3-217ENST00000548434 ECM29Q5VYK3 1845 aa20.34■□□□□ 0.85
RAPGEF3-217ENST00000548434 CAPN15O75808 1086 aa20.33■□□□□ 0.85
RAPGEF3-217ENST00000548434 SLC10A3P09131 477 aa20.33■□□□□ 0.85
RAPGEF3-217ENST00000548434 GTF2IP78347 998 aa20.33■□□□□ 0.85
RAPGEF3-217ENST00000548434 ANKRD44Q8N8A2 993 aa20.33■□□□□ 0.85
RAPGEF3-217ENST00000548434 CDCA7LQ96GN5 454 aa20.33■□□□□ 0.85
RAPGEF3-217ENST00000548434 TSKSQ9UJT2 592 aa20.33■□□□□ 0.85
RAPGEF3-217ENST00000548434 RIPOR2Q9Y4F9 1068 aa20.33■□□□□ 0.85
RAPGEF3-217ENST00000548434 AKAP11Q9UKA4 1901 aa20.33■□□□□ 0.84
RAPGEF3-217ENST00000548434 MTMR14Q8NCE2 650 aa20.32■□□□□ 0.84
RAPGEF3-217ENST00000548434 PUS3Q9BZE2 481 aaKnown RBP20.32■□□□□ 0.84
RAPGEF3-217ENST00000548434 C9orf78Q9NZ63 289 aaPredicted RBP20.32■□□□□ 0.84
RAPGEF3-217ENST00000548434 CA12O43570 354 aa20.31■□□□□ 0.84
RAPGEF3-217ENST00000548434 FKBP1AP62942 108 aaKnown RBP20.31■□□□□ 0.84
RAPGEF3-217ENST00000548434 PRAMEF18Q5VWM3 479 aa20.31■□□□□ 0.84
RAPGEF3-217ENST00000548434 SLC4A10Q6U841 1118 aa20.31■□□□□ 0.84
RAPGEF3-217ENST00000548434 LDHAL6AQ6ZMR3 332 aa20.31■□□□□ 0.84
RAPGEF3-217ENST00000548434 MOB2Q70IA6 237 aa20.31■□□□□ 0.84
RAPGEF3-217ENST00000548434 CCDC102AQ96A19 550 aa20.31■□□□□ 0.84
RAPGEF3-217ENST00000548434 USP44Q9H0E7 712 aa20.31■□□□□ 0.84
RAPGEF3-217ENST00000548434 FKBP1BP68106 108 aa20.3■□□□□ 0.84
RAPGEF3-217ENST00000548434 KIF23Q02241 960 aaPredicted RBP20.3■□□□□ 0.84
RAPGEF3-217ENST00000548434 CCDC57Q2TAC2 916 aa20.3■□□□□ 0.84
RAPGEF3-217ENST00000548434 KIAA0825Q8IV33 1275 aa20.3■□□□□ 0.84
RAPGEF3-217ENST00000548434 CSRNP1Q96S65 589 aa20.3■□□□□ 0.84
RAPGEF3-217ENST00000548434 PCDHAC2Q9Y5I4 1007 aa20.3■□□□□ 0.84
RAPGEF3-217ENST00000548434 PTPRCP08575 1304 aa20.29■□□□□ 0.84
RAPGEF3-217ENST00000548434 AOX1Q06278 1338 aa20.29■□□□□ 0.84
RAPGEF3-217ENST00000548434 SASH1O94885 1247 aa20.29■□□□□ 0.84
RAPGEF3-217ENST00000548434 ZNF157P51786 506 aaPredicted RBP20.29■□□□□ 0.84
RAPGEF3-217ENST00000548434 RASAL3Q86YV0 1011 aa20.29■□□□□ 0.84
RAPGEF3-217ENST00000548434 OGFOD1Q8N543 542 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms