RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 NOLC1Q14978 699 aaKnown RBP eCLIP8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 LMOD2Q6P5Q4 547 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 DDX46Q7L014 1031 aaKnown RBP8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 ZSCAN16Q9H4T2 348 aaPredicted RBP8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 CBX8Q9HC52 389 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 PYCARDQ9ULZ3 195 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 RNF113AO15541 343 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 HMGB1P09429 215 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 HSPD1P10809 573 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 CDC25BP30305 580 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 SNW1Q13573 536 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 IQCB1Q15051 598 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 BRINP3Q76B58 766 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 CADPS2Q86UW7 1296 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 FERMT3Q86UX7 667 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 ZNF274Q96GC6 653 aaPredicted RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 PDCL3Q9H2J4 239 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 NRAPQ86VF7 1730 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 DOT1LQ8TEK3 1739 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 CARMIL3Q8ND23 1372 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 UQCRHLA0A096LP55 91 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 E7EWF7 191 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 NR1I2O75469 434 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 UQCRHP07919 91 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 FDPSP14324 419 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 KCNJ4P48050 445 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 HMGN5P82970 282 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 ZCRB1Q8TBF4 217 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 ZNF830Q96NB3 372 aaPredicted RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 TTC12Q9H892 705 aaPredicted RBP8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 DACT1Q9NYF0 836 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 WDR19Q8NEZ3 1342 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 ZNF831Q5JPB2 1677 aa8.44□□□□□ -1.06
PDZRN4-204ENST00000548316 A1BGP04217 495 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 ATL3Q6DD88 541 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 SARM1Q6SZW1 724 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 PUS3Q9BZE2 481 aaKnown RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 GOLPH3LQ9H4A5 285 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 CDHR2Q9BYE9 1310 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 TPM3P06753 285 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 TRHP20396 242 aaPredicted RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 PDIA3P30101 505 aaKnown RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 HSP90AA2PQ14568 343 aaPredicted RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 MB21D2Q8IYB1 491 aaPredicted RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 ZNF710Q8N1W2 664 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 SPATA32Q96LK8 384 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 PRIMPOLQ96LW4 560 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 DNAJC2Q99543 621 aaKnown RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 NBPF3Q9H094 633 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 TFIP11Q9UBB9 837 aaKnown RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 ZNF75DP51815 510 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 VGLL2Q8N8G2 317 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 OSBP2Q969R2 916 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 ZNF512BQ96KM6 892 aaPredicted RBP8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 HPS5Q9UPZ3 1129 aa8.43□□□□□ -1.06
PDZRN4-204ENST00000548316 A0A1B0GUL7 405 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 GOLIM4O00461 696 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 ANTXR2P58335 489 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 TIMM10P62072 90 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 STK3Q13188 491 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 TCIRG1Q13488 830 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 C17orf53Q8N3J3 647 aaPredicted RBP8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 ZNF594Q96JF6 807 aaPredicted RBP8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 PTPDC1A2A3K4 754 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 PCCAP05165 728 aaPredicted RBP8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 APOBRQ0VD83 1088 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 ANO6Q4KMQ2 910 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 NID2Q14112 1375 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 COL4A1P02462 1669 aa8.42□□□□□ -1.06
PDZRN4-204ENST00000548316 ADORA1P30542 326 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 SCARF1Q14162 830 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 LUZP1Q86V48 1076 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 RIPOR2Q9Y4F9 1068 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 CAVIN2O95810 425 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 CSB-PGBD3P0DP91 1061 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 MAP7D2Q96T17 732 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 LRRC2Q9BYS8 371 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 TNMDQ9H2S6 317 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 KCND1Q9NSA2 647 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 SCN7AQ01118 1682 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 BCL9LQ86UU0 1499 aa8.41□□□□□ -1.06
PDZRN4-204ENST00000548316 DDX11Q96FC9 970 aa8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 USP28Q96RU2 1077 aa8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 RTEL1Q9NZ71 1219 aa8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 KIAA1551Q9HCM1 1747 aa8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 CTIFO43310 598 aaKnown RBP8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 IFIT1P09914 478 aaKnown RBP8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 TTLL5Q6EMB2 1281 aa8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 C11orf57Q6ZUT1 292 aaPredicted RBP8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 DHX40Q8IX18 779 aaKnown RBP8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 FMR1NBQ8N0W7 255 aaPredicted RBP8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 FTOQ9C0B1 505 aaKnown RBP eCLIP8.4□□□□□ -1.06
PDZRN4-204ENST00000548316 BCL9O00512 1426 aa8.4□□□□□ -1.07
PDZRN4-204ENST00000548316 A0A1W2PQ27 194 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms