RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 RIMBP2O15034 1052 aa21.08■□□□□ 0.96
KRT4-201ENST00000548097 IFIT2P09913 472 aaKnown RBP21.08■□□□□ 0.96
KRT4-201ENST00000548097 LPIN2Q92539 896 aa21.08■□□□□ 0.96
KRT4-201ENST00000548097 XAGE2Q96GT9 111 aa21.08■□□□□ 0.96
KRT4-201ENST00000548097 ATP2B4P23634 1241 aa21.07■□□□□ 0.96
KRT4-201ENST00000548097 GYG1P46976 350 aa21.07■□□□□ 0.96
KRT4-201ENST00000548097 GPR108Q9NPR9 543 aa21.07■□□□□ 0.96
KRT4-201ENST00000548097 SLC5A1P13866 664 aa21.06■□□□□ 0.96
KRT4-201ENST00000548097 RGS3P49796 1198 aa21.06■□□□□ 0.96
KRT4-201ENST00000548097 UBE4AQ14139 1066 aa21.06■□□□□ 0.96
KRT4-201ENST00000548097 LEMD3Q9Y2U8 911 aa21.06■□□□□ 0.96
KRT4-201ENST00000548097 IFIT1P09914 478 aaKnown RBP21.06■□□□□ 0.96
KRT4-201ENST00000548097 BCAMP50895 628 aa21.06■□□□□ 0.96
KRT4-201ENST00000548097 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
KRT4-201ENST00000548097 RASSF7Q02833 373 aa21.05■□□□□ 0.96
KRT4-201ENST00000548097 IRS2Q9Y4H2 1338 aa21.05■□□□□ 0.96
KRT4-201ENST00000548097 CC2D2BQ6DHV5 1058 aa21.04■□□□□ 0.96
KRT4-201ENST00000548097 ZNF277Q9NRM2 450 aaPredicted RBP21.04■□□□□ 0.96
KRT4-201ENST00000548097 IQSEC3Q9UPP2 1182 aaPredicted RBP21.04■□□□□ 0.96
KRT4-201ENST00000548097 NFKBIEO00221 500 aa21.04■□□□□ 0.96
KRT4-201ENST00000548097 PHKA1P46020 1223 aa21.04■□□□□ 0.96
KRT4-201ENST00000548097 GORABQ5T7V8 394 aa21.04■□□□□ 0.96
KRT4-201ENST00000548097 RTKN2Q8IZC4 609 aa21.04■□□□□ 0.96
KRT4-201ENST00000548097 AOC3Q16853 763 aa21.03■□□□□ 0.96
KRT4-201ENST00000548097 WASHC4Q2M389 1173 aa21.03■□□□□ 0.96
KRT4-201ENST00000548097 ARHGAP27Q6ZUM4 889 aa21.03■□□□□ 0.96
KRT4-201ENST00000548097 PLEKHM2Q8IWE5 1019 aa21.03■□□□□ 0.96
KRT4-201ENST00000548097 FAM84BQ96KN1 310 aaPredicted RBP21.03■□□□□ 0.96
KRT4-201ENST00000548097 SALL3Q9BXA9 1300 aa21.03■□□□□ 0.96
KRT4-201ENST00000548097 ARAP2Q8WZ64 1704 aa21.03■□□□□ 0.96
KRT4-201ENST00000548097 FER1L6Q2WGJ9 1857 aa21.03■□□□□ 0.96
KRT4-201ENST00000548097 DOK7Q18PE1 504 aa21.02■□□□□ 0.96
KRT4-201ENST00000548097 SOGA3Q5TF21 947 aa21.02■□□□□ 0.96
KRT4-201ENST00000548097 CCDC102BQ68D86 513 aa21.02■□□□□ 0.96
KRT4-201ENST00000548097 RTFDC1Q9BY42 306 aaPredicted RBP21.02■□□□□ 0.96
KRT4-201ENST00000548097 NDUFB9Q9Y6M9 179 aa21.02■□□□□ 0.96
KRT4-201ENST00000548097 MX1P20591 662 aa21.01■□□□□ 0.95
KRT4-201ENST00000548097 FKBP4Q02790 459 aaKnown RBP eCLIP21.01■□□□□ 0.95
KRT4-201ENST00000548097 GPR162Q16538 588 aa21.01■□□□□ 0.95
KRT4-201ENST00000548097 PRELPP51888 382 aa21.01■□□□□ 0.95
KRT4-201ENST00000548097 ZC3H12CQ9C0D7 883 aaKnown RBP21.01■□□□□ 0.95
KRT4-201ENST00000548097 TAOK3Q9H2K8 898 aa21.01■□□□□ 0.95
KRT4-201ENST00000548097 PDE1AP54750 535 aa21■□□□□ 0.95
KRT4-201ENST00000548097 SCARF1Q14162 830 aa21■□□□□ 0.95
KRT4-201ENST00000548097 PSMD1Q99460 953 aa21■□□□□ 0.95
KRT4-201ENST00000548097 DBNDD1Q9H9R9 158 aa21■□□□□ 0.95
KRT4-201ENST00000548097 MED23Q9ULK4 1368 aa21■□□□□ 0.95
KRT4-201ENST00000548097 PPIP5K2O43314 1243 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 CAVIN4Q5BKX8 364 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 TTC39AQ5SRH9 613 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 PI16Q6UXB8 463 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 VPS37DQ86XT2 251 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 JAG2Q9Y219 1238 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 HIBADHP31937 336 aaKnown RBP20.99■□□□□ 0.95
KRT4-201ENST00000548097 CCDC158Q5M9N0 1113 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 FBXO33Q7Z6M2 555 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 EYA3Q99504 573 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 BOLA2Q9H3K6 86 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 ECHDC1Q9NTX5 307 aa20.99■□□□□ 0.95
KRT4-201ENST00000548097 COL4A5P29400 1685 aa20.98■□□□□ 0.95
KRT4-201ENST00000548097 MAP4K4O95819 1239 aaPredicted RBP20.98■□□□□ 0.95
KRT4-201ENST00000548097 SNRKQ9NRH2 765 aa20.98■□□□□ 0.95
KRT4-201ENST00000548097 SUPT20HQ8NEM7 779 aa20.97■□□□□ 0.95
KRT4-201ENST00000548097 PI4K2BQ8TCG2 481 aa20.97■□□□□ 0.95
KRT4-201ENST00000548097 KIAA2012Q0VF49 1180 aa20.97■□□□□ 0.95
KRT4-201ENST00000548097 GRIPAP1Q4V328 841 aa20.97■□□□□ 0.95
KRT4-201ENST00000548097 C15orf52Q6ZUT6 534 aaKnown RBP20.97■□□□□ 0.95
KRT4-201ENST00000548097 KCNQ5Q9NR82 932 aa20.97■□□□□ 0.95
KRT4-201ENST00000548097 G3V3G9 751 aa20.96■□□□□ 0.95
KRT4-201ENST00000548097 IARSP41252 1262 aaKnown RBP20.96■□□□□ 0.95
KRT4-201ENST00000548097 MCAMP43121 646 aa20.96■□□□□ 0.95
KRT4-201ENST00000548097 DCAF8Q5TAQ9 597 aa20.96■□□□□ 0.95
KRT4-201ENST00000548097 ZNF804AQ7Z570 1209 aa20.96■□□□□ 0.95
KRT4-201ENST00000548097 LARGE2Q8N3Y3 721 aa20.96■□□□□ 0.95
KRT4-201ENST00000548097 EDC3Q96F86 508 aaKnown RBP20.96■□□□□ 0.95
KRT4-201ENST00000548097 CD209Q9NNX6 404 aa20.96■□□□□ 0.95
KRT4-201ENST00000548097 STAP2Q9UGK3 403 aa20.96■□□□□ 0.95
KRT4-201ENST00000548097 RASGRF1Q13972 1273 aa20.95■□□□□ 0.94
KRT4-201ENST00000548097 COL1A1P02452 1464 aaPredicted RBP20.95■□□□□ 0.94
KRT4-201ENST00000548097 CHD4Q14839 1912 aa20.95■□□□□ 0.94
KRT4-201ENST00000548097 CCDC88AQ3V6T2 1871 aa20.95■□□□□ 0.94
KRT4-201ENST00000548097 FRAT2O75474 233 aaPredicted RBP20.94■□□□□ 0.94
KRT4-201ENST00000548097 GPATCH3Q96I76 525 aa20.94■□□□□ 0.94
KRT4-201ENST00000548097 DNAJC2Q99543 621 aaKnown RBP20.94■□□□□ 0.94
KRT4-201ENST00000548097 TTC41PQ6P2S7 1318 aa20.94■□□□□ 0.94
KRT4-201ENST00000548097 ECE2O60344 883 aa20.94■□□□□ 0.94
KRT4-201ENST00000548097 ATP5JP18859 108 aa20.94■□□□□ 0.94
KRT4-201ENST00000548097 ARID4AP29374 1257 aaPredicted RBP20.94■□□□□ 0.94
KRT4-201ENST00000548097 CHAF1AQ13111 956 aaPredicted RBP20.94■□□□□ 0.94
KRT4-201ENST00000548097 HMG20BQ9P0W2 317 aa20.94■□□□□ 0.94
KRT4-201ENST00000548097 ZAP70P43403 619 aa20.93■□□□□ 0.94
KRT4-201ENST00000548097 YDJCA8MPS7 323 aa20.92■□□□□ 0.94
KRT4-201ENST00000548097 GSPT1P15170 499 aaKnown RBP20.92■□□□□ 0.94
KRT4-201ENST00000548097 TDRD7Q8NHU6 1098 aaKnown RBP20.92■□□□□ 0.94
KRT4-201ENST00000548097 FBXW7Q969H0 707 aa20.92■□□□□ 0.94
KRT4-201ENST00000548097 COA1Q9GZY4 146 aa20.92■□□□□ 0.94
KRT4-201ENST00000548097 OSBPL3Q9H4L5 887 aa20.92■□□□□ 0.94
KRT4-201ENST00000548097 ANTXR1Q9H6X2 564 aa20.92■□□□□ 0.94
KRT4-201ENST00000548097 LTBP3Q9NS15 1303 aa20.92■□□□□ 0.94
KRT4-201ENST00000548097 AKAP11Q9UKA4 1901 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms