RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 IGKV5-2P06315 115 aa8.59□□□□□ -1.03
SCAF11-211ENST00000547950 VEGFBP49765 207 aa8.59□□□□□ -1.03
SCAF11-211ENST00000547950 CWF19L2Q2TBE0 894 aaKnown RBP8.59□□□□□ -1.03
SCAF11-211ENST00000547950 DEFB115Q30KQ5 88 aa8.59□□□□□ -1.03
SCAF11-211ENST00000547950 TBC1D16Q8TBP0 767 aa8.59□□□□□ -1.03
SCAF11-211ENST00000547950 EYA3Q99504 573 aa8.59□□□□□ -1.03
SCAF11-211ENST00000547950 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.03
SCAF11-211ENST00000547950 KCNQ5Q9NR82 932 aa8.59□□□□□ -1.03
SCAF11-211ENST00000547950 IL16Q14005 1332 aa8.58□□□□□ -1.04
SCAF11-211ENST00000547950 SHTN1A0MZ66 631 aa8.58□□□□□ -1.04
SCAF11-211ENST00000547950 H7C1D1 291 aa8.58□□□□□ -1.04
SCAF11-211ENST00000547950 VAMP4O75379 141 aa8.58□□□□□ -1.04
SCAF11-211ENST00000547950 UFL1O94874 794 aa8.58□□□□□ -1.04
SCAF11-211ENST00000547950 HOXB3P14651 431 aaPredicted RBP8.58□□□□□ -1.04
SCAF11-211ENST00000547950 EXOSC9Q06265 439 aaKnown RBP8.58□□□□□ -1.04
SCAF11-211ENST00000547950 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
SCAF11-211ENST00000547950 PAXIP1Q6ZW49 1069 aaPredicted RBP8.58□□□□□ -1.04
SCAF11-211ENST00000547950 ANKRD18AQ8IVF6 992 aa8.58□□□□□ -1.04
SCAF11-211ENST00000547950 WDR63Q8IWG1 891 aa8.58□□□□□ -1.04
SCAF11-211ENST00000547950 CNTNAP1P78357 1384 aa8.58□□□□□ -1.04
SCAF11-211ENST00000547950 FANCIQ9NVI1 1328 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 NEURL1BA8MQ27 555 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 PSMD14O00487 310 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 ECE2O60344 883 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 HIRAP54198 1017 aaPredicted RBP8.57□□□□□ -1.04
SCAF11-211ENST00000547950 FLIIQ13045 1269 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 GRM1Q13255 1194 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
SCAF11-211ENST00000547950 CST9Q5W186 159 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 TTLL11Q8NHH1 800 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 ZNF408Q9H9D4 720 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 GGA1Q9UJY5 639 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 CCDC88AQ3V6T2 1871 aa8.57□□□□□ -1.04
SCAF11-211ENST00000547950 ARFGEF2Q9Y6D5 1785 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 CACNA1SQ13698 1873 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 WTIPA6NIX2 430 aaPredicted RBP8.56□□□□□ -1.04
SCAF11-211ENST00000547950 H7C1W4 665 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 CTSWP56202 376 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 GCKRQ14397 625 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 TBC1D10BQ4KMP7 808 aaPredicted RBP8.56□□□□□ -1.04
SCAF11-211ENST00000547950 TMEM92Q6UXU6 159 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 SAMD7Q7Z3H4 446 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 UBE3BQ7Z3V4 1068 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 USP48Q86UV5 1035 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 TRPM4Q8TD43 1214 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 CDC5LQ99459 802 aaKnown RBP8.56□□□□□ -1.04
SCAF11-211ENST00000547950 GLIS2Q9BZE0 524 aaPredicted RBP8.56□□□□□ -1.04
SCAF11-211ENST00000547950 GREM2Q9H772 168 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 PODXL2Q9NZ53 605 aa8.56□□□□□ -1.04
SCAF11-211ENST00000547950 CDHR2Q9BYE9 1310 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 WDR33Q9C0J8 1336 aaKnown RBP8.55□□□□□ -1.04
SCAF11-211ENST00000547950 RASSF10A6NK89 507 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 CELF2O95319 508 aaKnown RBP8.55□□□□□ -1.04
SCAF11-211ENST00000547950 ATP2B4P23634 1241 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 DLK2Q6UY11 383 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 CDC37L1Q7L3B6 337 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 TNS4Q8IZW8 715 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 LINS1Q8NG48 757 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
SCAF11-211ENST00000547950 DPF2Q92785 391 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 AIDAQ96BJ3 306 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 MYH16Q9H6N6 1097 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 PGAP2Q9UHJ9 254 aa8.55□□□□□ -1.04
SCAF11-211ENST00000547950 XDHP47989 1333 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 DICER1Q9UPY3 1922 aaKnown RBP8.54□□□□□ -1.04
SCAF11-211ENST00000547950 RTL9Q8NET4 1388 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 POTEB3A0JP26 581 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 F6X3S4 739 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 FOXN1O15353 648 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 EGFRP00533 1210 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 VIL1P09327 827 aaKnown RBP8.54□□□□□ -1.04
SCAF11-211ENST00000547950 RPS12P25398 132 aaKnown RBP8.54□□□□□ -1.04
SCAF11-211ENST00000547950 IGHMBP2P38935 993 aaKnown RBP8.54□□□□□ -1.04
SCAF11-211ENST00000547950 CYP4F22Q6NT55 531 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 POTEBQ6S5H4 581 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 CAPNS2Q96L46 248 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 BSDC1Q9NW68 430 aaPredicted RBP8.54□□□□□ -1.04
SCAF11-211ENST00000547950 MINPP1Q9UNW1 487 aa8.54□□□□□ -1.04
SCAF11-211ENST00000547950 ITGA6P23229 1130 aa8.53□□□□□ -1.04
SCAF11-211ENST00000547950 ECE1P42892 770 aa8.53□□□□□ -1.04
SCAF11-211ENST00000547950 FBXW7Q969H0 707 aa8.53□□□□□ -1.04
SCAF11-211ENST00000547950 DCPSQ96C86 337 aaKnown RBP8.53□□□□□ -1.04
SCAF11-211ENST00000547950 MPHOSPH8Q99549 860 aa8.53□□□□□ -1.04
SCAF11-211ENST00000547950 WBP1LQ9NX94 342 aa8.53□□□□□ -1.04
SCAF11-211ENST00000547950 TLL2Q9Y6L7 1015 aa8.53□□□□□ -1.04
SCAF11-211ENST00000547950 SCN4AP35499 1836 aa8.52□□□□□ -1.04
SCAF11-211ENST00000547950 CSF1RP07333 972 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 HOXB1P14653 301 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-211ENST00000547950 CTCFP49711 727 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-211ENST00000547950 CCT4P50991 539 aaKnown RBP8.52□□□□□ -1.05
SCAF11-211ENST00000547950 LBX1P52954 281 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 CASP7P55210 303 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 MAP2K1Q02750 393 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-211ENST00000547950 KIF4BQ2VIQ3 1234 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 RSBN1LQ6PCB5 846 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-211ENST00000547950 SLC4A10Q6U841 1118 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 KRT26Q7Z3Y9 468 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms