RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
CACNB3-206ENST00000547693 GGA1Q9UJY5 639 aa12.7□□□□□ -0.38
CACNB3-206ENST00000547693 NSFL1CQ9UNZ2 370 aaKnown RBP12.7□□□□□ -0.38
CACNB3-206ENST00000547693 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-206ENST00000547693 HIP1O00291 1037 aa12.69□□□□□ -0.38
CACNB3-206ENST00000547693 CDC45O75419 566 aa12.69□□□□□ -0.38
CACNB3-206ENST00000547693 SDSP20132 328 aa12.69□□□□□ -0.38
CACNB3-206ENST00000547693 MPNDQ8N594 471 aa12.69□□□□□ -0.38
CACNB3-206ENST00000547693 TTLL6Q8N841 843 aa12.69□□□□□ -0.38
CACNB3-206ENST00000547693 HAUS7Q99871 368 aa12.69□□□□□ -0.38
CACNB3-206ENST00000547693 BOLA2Q9H3K6 86 aa12.69□□□□□ -0.38
CACNB3-206ENST00000547693 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
CACNB3-206ENST00000547693 C10orf71Q711Q0 1435 aa12.69□□□□□ -0.38
CACNB3-206ENST00000547693 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
CACNB3-206ENST00000547693 CHRNA5P30532 468 aa12.68□□□□□ -0.38
CACNB3-206ENST00000547693 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
CACNB3-206ENST00000547693 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
CACNB3-206ENST00000547693 CCDC102BQ68D86 513 aa12.68□□□□□ -0.38
CACNB3-206ENST00000547693 EYA3Q99504 573 aa12.68□□□□□ -0.38
CACNB3-206ENST00000547693 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
CACNB3-206ENST00000547693 C6orf229H3BNL8 230 aa12.67□□□□□ -0.38
CACNB3-206ENST00000547693 SEMA3EO15041 775 aa12.67□□□□□ -0.38
CACNB3-206ENST00000547693 FRAT2O75474 233 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-206ENST00000547693 ADORA1P30542 326 aa12.67□□□□□ -0.38
CACNB3-206ENST00000547693 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
CACNB3-206ENST00000547693 GPSM2P81274 684 aa12.67□□□□□ -0.38
CACNB3-206ENST00000547693 TTF1Q15361 905 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-206ENST00000547693 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
CACNB3-206ENST00000547693 DPP8Q6V1X1 898 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-206ENST00000547693 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
CACNB3-206ENST00000547693 SUPT20HQ8NEM7 779 aa12.67□□□□□ -0.38
CACNB3-206ENST00000547693 RUFY2Q8WXA3 655 aa12.67□□□□□ -0.38
CACNB3-206ENST00000547693 BACH2Q9BYV9 841 aa12.67□□□□□ -0.38
CACNB3-206ENST00000547693 UPF2Q9HAU5 1272 aaKnown RBP12.67□□□□□ -0.38
CACNB3-206ENST00000547693 A0A0G2JLW4 131 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 ZBTB22O15209 634 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 UFL1O94874 794 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 DPEP1P16444 411 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 HSPA6P17066 643 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-206ENST00000547693 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
CACNB3-206ENST00000547693 ZSCAN25Q6NSZ9 544 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 FBXO33Q7Z6M2 555 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 DNAJC2Q99543 621 aaKnown RBP12.66□□□□□ -0.38
CACNB3-206ENST00000547693 ZC3H12CQ9C0D7 883 aaKnown RBP12.66□□□□□ -0.38
CACNB3-206ENST00000547693 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 DENND2AQ9ULE3 1009 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 KIF13BQ9NQT8 1826 aa12.66□□□□□ -0.38
CACNB3-206ENST00000547693 AK9Q5TCS8 1911 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 G3V3G9 751 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 PHKA1P46020 1223 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 BCAMP50895 628 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 GPR162Q16538 588 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.38
CACNB3-206ENST00000547693 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 TBC1D16Q8TBP0 767 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 FAM84BQ96KN1 310 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-206ENST00000547693 FSD1Q9BTV5 496 aa12.65□□□□□ -0.38
CACNB3-206ENST00000547693 SNAP23O00161 211 aa12.64□□□□□ -0.39
CACNB3-206ENST00000547693 IGSF3O75054 1194 aa12.64□□□□□ -0.39
CACNB3-206ENST00000547693 MAP4K4O95819 1239 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-206ENST00000547693 WASHC4Q2M389 1173 aa12.64□□□□□ -0.39
CACNB3-206ENST00000547693 SPATA5Q8NB90 893 aa12.64□□□□□ -0.39
CACNB3-206ENST00000547693 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.64□□□□□ -0.39
CACNB3-206ENST00000547693 DIAPH3Q9NSV4 1193 aa12.64□□□□□ -0.39
CACNB3-206ENST00000547693 ARAP2Q8WZ64 1704 aa12.64□□□□□ -0.39
CACNB3-206ENST00000547693 GOLIM4O00461 696 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 ZFYP08048 801 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-206ENST00000547693 KCNA3P22001 575 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 GYG1P46976 350 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 C8orf34Q49A92 452 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 KBTBD3Q8NAB2 608 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 VPS33BQ9H267 617 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 A0A1B0GUL6 1792 aa12.63□□□□□ -0.39
CACNB3-206ENST00000547693 COL11A2P13942 1736 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-206ENST00000547693 CACNA1SQ13698 1873 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 DLEC1Q9Y238 1755 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 RFX7Q2KHR2 1363 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 MED23Q9ULK4 1368 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 C21orf2O43822 256 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 REC8O95072 547 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 CHMLP26374 656 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 MCAMP43121 646 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 ZAP70P43403 619 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 SPTY2D1Q68D10 685 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-206ENST00000547693 ZGPATQ8N5A5 531 aaKnown RBP12.62□□□□□ -0.39
CACNB3-206ENST00000547693 C7orf43Q8WVR3 580 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 SNRKQ9NRH2 765 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 HMG20BQ9P0W2 317 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-206ENST00000547693 POLLQ9UGP5 575 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 SLX4Q8IY92 1834 aa12.62□□□□□ -0.39
CACNB3-206ENST00000547693 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
CACNB3-206ENST00000547693 COL4A1P02462 1669 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms