RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 COA1Q9GZY4 146 aa11.7□□□□□ -0.54
AC055716.3-201ENST00000547533 BSDC1Q9NW68 430 aaPredicted RBP11.7□□□□□ -0.54
AC055716.3-201ENST00000547533 MAP3K2Q9Y2U5 619 aa11.7□□□□□ -0.54
AC055716.3-201ENST00000547533 CACNA1FO60840 1977 aa11.7□□□□□ -0.54
AC055716.3-201ENST00000547533 APAF1O14727 1248 aa11.69□□□□□ -0.54
AC055716.3-201ENST00000547533 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
AC055716.3-201ENST00000547533 SOX10P56693 466 aa11.69□□□□□ -0.54
AC055716.3-201ENST00000547533 KSR2Q6VAB6 950 aa11.69□□□□□ -0.54
AC055716.3-201ENST00000547533 APOBEC3FQ8IUX4 373 aaKnown RBP11.69□□□□□ -0.54
AC055716.3-201ENST00000547533 MPHOSPH8Q99549 860 aa11.69□□□□□ -0.54
AC055716.3-201ENST00000547533 ANKRD2Q9GZV1 360 aa11.69□□□□□ -0.54
AC055716.3-201ENST00000547533 LEMD3Q9Y2U8 911 aa11.69□□□□□ -0.54
AC055716.3-201ENST00000547533 COL4A1P02462 1669 aa11.68□□□□□ -0.54
AC055716.3-201ENST00000547533 CCT4P50991 539 aaKnown RBP11.68□□□□□ -0.54
AC055716.3-201ENST00000547533 STRIP1Q5VSL9 837 aa11.68□□□□□ -0.54
AC055716.3-201ENST00000547533 GMLQ99445 158 aa11.68□□□□□ -0.54
AC055716.3-201ENST00000547533 MYH16Q9H6N6 1097 aa11.68□□□□□ -0.54
AC055716.3-201ENST00000547533 ASTN2O75129 1339 aaPredicted RBP11.67□□□□□ -0.54
AC055716.3-201ENST00000547533 PI4KAP2A4QPH2 592 aa11.67□□□□□ -0.54
AC055716.3-201ENST00000547533 MYO1BO43795 1136 aa11.67□□□□□ -0.54
AC055716.3-201ENST00000547533 ALDH1A1P00352 501 aa11.67□□□□□ -0.54
AC055716.3-201ENST00000547533 PI4KAP1Q8N8J0 262 aa11.67□□□□□ -0.54
AC055716.3-201ENST00000547533 MINPP1Q9UNW1 487 aa11.67□□□□□ -0.54
AC055716.3-201ENST00000547533 ECM29Q5VYK3 1845 aa11.67□□□□□ -0.54
AC055716.3-201ENST00000547533 COL1A1P02452 1464 aaPredicted RBP11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 NBPF9Q3BBW0 867 aa11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 NOM1Q5C9Z4 860 aaKnown RBP11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 DACT2Q5SW24 774 aa11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 TTLL5Q6EMB2 1281 aa11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 C8orf58Q8NAV2 365 aa11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 TTLL11Q8NHH1 800 aa11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 JARID2Q92833 1246 aaPredicted RBP11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 GREM2Q9H772 168 aa11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 HPS5Q9UPZ3 1129 aa11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 TNRC18O15417 2968 aaPredicted RBP11.66□□□□□ -0.54
AC055716.3-201ENST00000547533 ZNF804BA4D1E1 1349 aa11.65□□□□□ -0.54
AC055716.3-201ENST00000547533 WNT10BO00744 389 aa11.65□□□□□ -0.54
AC055716.3-201ENST00000547533 TBC1D8O95759 1140 aa11.65□□□□□ -0.54
AC055716.3-201ENST00000547533 TM4SF4P48230 202 aa11.65□□□□□ -0.54
AC055716.3-201ENST00000547533 INHBEP58166 350 aa11.65□□□□□ -0.54
AC055716.3-201ENST00000547533 PRPF38BQ5VTL8 546 aaKnown RBP11.65□□□□□ -0.54
AC055716.3-201ENST00000547533 ZNF296Q8WUU4 475 aaPredicted RBP11.65□□□□□ -0.54
AC055716.3-201ENST00000547533 GPR25O00155 361 aa11.64□□□□□ -0.55
AC055716.3-201ENST00000547533 PPP1R12BO60237 982 aaPredicted RBP11.64□□□□□ -0.55
AC055716.3-201ENST00000547533 FKTNO75072 461 aa11.64□□□□□ -0.55
AC055716.3-201ENST00000547533 DLGAP5Q15398 846 aa11.64□□□□□ -0.55
AC055716.3-201ENST00000547533 OTUD7BQ6GQQ9 843 aa11.64□□□□□ -0.55
AC055716.3-201ENST00000547533 FBXO46Q6PJ61 603 aaPredicted RBP11.64□□□□□ -0.55
AC055716.3-201ENST00000547533 UBE3BQ7Z3V4 1068 aa11.64□□□□□ -0.55
AC055716.3-201ENST00000547533 PRKRIP1Q9H875 184 aaPredicted RBP11.64□□□□□ -0.55
AC055716.3-201ENST00000547533 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 MANSC4A6NHS7 340 aaPredicted RBP11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 UNCXA6NJT0 531 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 NEURL1BA8MQ27 555 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 SASH1O94885 1247 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 ITGA6P23229 1130 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 CWF19L2Q2TBE0 894 aaKnown RBP11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 SUPT20HL1Q3ZLR7 823 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 MOB2Q70IA6 237 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 KIAA0825Q8IV33 1275 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 GCC1Q96CN9 775 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 ANGEL1Q9UNK9 670 aaKnown RBP11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 ZNF646O15015 1829 aaPredicted RBP11.63□□□□□ -0.55
AC055716.3-201ENST00000547533 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 IGKV5-2P06315 115 aa11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 GTF2IP78347 998 aa11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 FKBP5Q13451 457 aaPredicted RBP11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 PRKG1Q13976 671 aa11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 TWISTNBQ3B726 338 aaPredicted RBP11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 PRAMEF18Q5VWM3 479 aa11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 ZNF804AQ7Z570 1209 aa11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
AC055716.3-201ENST00000547533 H7C1W4 665 aa11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 ZBTB48P10074 688 aaPredicted RBP11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 IREB2P48200 963 aaKnown RBP11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 GCKRQ14397 625 aa11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 TAF7LQ5H9L4 462 aa11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 INTS3Q68E01 1043 aaKnown RBP11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 MXD3Q9BW11 206 aa11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 PLA2G12BQ9BX93 195 aa11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 CFHR5Q9BXR6 569 aa11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 DEFB129Q9H1M3 183 aa11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 CHMP3Q9Y3E7 222 aa11.61□□□□□ -0.55
AC055716.3-201ENST00000547533 WDHD1O75717 1129 aaPredicted RBP11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 RBM5P52756 815 aaKnown RBP eCLIP11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 CHRNDQ07001 517 aa11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 FLIIQ13045 1269 aa11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 TNFAIP1Q13829 316 aa11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 ARHGEF6Q15052 776 aa11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 CCDC27Q2M243 656 aa11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 SPRYD7Q5W111 196 aa11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 TSPYL6Q8N831 410 aa11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
AC055716.3-201ENST00000547533 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms