RNA–Protein interactions for RNA: ENST00000547441.1

PRKD1-206, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-206ENST00000547441 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
PRKD1-206ENST00000547441 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
PRKD1-206ENST00000547441 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
PRKD1-206ENST00000547441 CTU1Q7Z7A3 348 aaKnown RBP12.49□□□□□ -0.41
PRKD1-206ENST00000547441 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
PRKD1-206ENST00000547441 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
PRKD1-206ENST00000547441 CSRNP1Q96S65 589 aa12.49□□□□□ -0.41
PRKD1-206ENST00000547441 HTTP42858 3142 aa12.49□□□□□ -0.41
PRKD1-206ENST00000547441 FANCIQ9NVI1 1328 aa12.48□□□□□ -0.41
PRKD1-206ENST00000547441 ECE2O60344 883 aa12.48□□□□□ -0.41
PRKD1-206ENST00000547441 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
PRKD1-206ENST00000547441 TRIM28Q13263 835 aaKnown RBP12.48□□□□□ -0.41
PRKD1-206ENST00000547441 RBM26Q5T8P6 1007 aaKnown RBP12.48□□□□□ -0.41
PRKD1-206ENST00000547441 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
PRKD1-206ENST00000547441 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
PRKD1-206ENST00000547441 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
PRKD1-206ENST00000547441 GGA3Q9NZ52 723 aa12.48□□□□□ -0.41
PRKD1-206ENST00000547441 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
PRKD1-206ENST00000547441 SCN9AQ15858 1988 aa12.48□□□□□ -0.41
PRKD1-206ENST00000547441 ZNF521Q96K83 1311 aa12.47□□□□□ -0.41
PRKD1-206ENST00000547441 C6orf229H3BNL8 230 aa12.47□□□□□ -0.41
PRKD1-206ENST00000547441 RIMBP2O15034 1052 aa12.47□□□□□ -0.41
PRKD1-206ENST00000547441 KIF4BQ2VIQ3 1234 aa12.47□□□□□ -0.41
PRKD1-206ENST00000547441 KCNQ5Q9NR82 932 aa12.47□□□□□ -0.41
PRKD1-206ENST00000547441 POLLQ9UGP5 575 aa12.47□□□□□ -0.41
PRKD1-206ENST00000547441 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
PRKD1-206ENST00000547441 COL4A1P02462 1669 aa12.46□□□□□ -0.41
PRKD1-206ENST00000547441 GPSM2P81274 684 aa12.46□□□□□ -0.41
PRKD1-206ENST00000547441 PDAP1Q13442 181 aaKnown RBP12.46□□□□□ -0.41
PRKD1-206ENST00000547441 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.41
PRKD1-206ENST00000547441 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.41
PRKD1-206ENST00000547441 RASAL3Q86YV0 1011 aa12.46□□□□□ -0.41
PRKD1-206ENST00000547441 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
PRKD1-206ENST00000547441 CDCA5Q96FF9 252 aa12.46□□□□□ -0.41
PRKD1-206ENST00000547441 EYA3Q99504 573 aa12.46□□□□□ -0.41
PRKD1-206ENST00000547441 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
PRKD1-206ENST00000547441 RYDENQ9NUL5 291 aaKnown RBP12.46□□□□□ -0.41
PRKD1-206ENST00000547441 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.42
PRKD1-206ENST00000547441 ZNF609O15014 1411 aa12.45□□□□□ -0.42
PRKD1-206ENST00000547441 CENPFP49454 3210 aa12.45□□□□□ -0.42
PRKD1-206ENST00000547441 ASTN2O75129 1339 aaPredicted RBP12.45□□□□□ -0.42
PRKD1-206ENST00000547441 VIL1P09327 827 aaKnown RBP12.45□□□□□ -0.42
PRKD1-206ENST00000547441 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
PRKD1-206ENST00000547441 DOK7Q18PE1 504 aa12.45□□□□□ -0.42
PRKD1-206ENST00000547441 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
PRKD1-206ENST00000547441 VAMP4O75379 141 aa12.44□□□□□ -0.42
PRKD1-206ENST00000547441 HSP90B1P14625 803 aaKnown RBP12.44□□□□□ -0.42
PRKD1-206ENST00000547441 FKBP1BP68106 108 aa12.44□□□□□ -0.42
PRKD1-206ENST00000547441 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
PRKD1-206ENST00000547441 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
PRKD1-206ENST00000547441 TBC1D16Q8TBP0 767 aa12.44□□□□□ -0.42
PRKD1-206ENST00000547441 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
PRKD1-206ENST00000547441 PHAXQ9H814 394 aaKnown RBP12.44□□□□□ -0.42
PRKD1-206ENST00000547441 PCDHB8Q9UN66 801 aa12.44□□□□□ -0.42
PRKD1-206ENST00000547441 PCDHB13Q9Y5F0 798 aa12.44□□□□□ -0.42
PRKD1-206ENST00000547441 PSME4Q14997 1843 aa12.44□□□□□ -0.42
PRKD1-206ENST00000547441 E9PSI1 815 aa12.43□□□□□ -0.42
PRKD1-206ENST00000547441 ZNF280AP59817 542 aaPredicted RBP12.43□□□□□ -0.42
PRKD1-206ENST00000547441 EXOSC9Q06265 439 aaKnown RBP12.43□□□□□ -0.42
PRKD1-206ENST00000547441 KSR2Q6VAB6 950 aa12.43□□□□□ -0.42
PRKD1-206ENST00000547441 CCDC191Q8NCU4 936 aa12.43□□□□□ -0.42
PRKD1-206ENST00000547441 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
PRKD1-206ENST00000547441 METTL22Q9BUU2 404 aaPredicted RBP12.43□□□□□ -0.42
PRKD1-206ENST00000547441 SCARF1Q14162 830 aa12.42□□□□□ -0.42
PRKD1-206ENST00000547441 ANGEL2Q5VTE6 544 aaKnown RBP12.42□□□□□ -0.42
PRKD1-206ENST00000547441 AGBL3Q8NEM8 1001 aa12.42□□□□□ -0.42
PRKD1-206ENST00000547441 ZC3H12CQ9C0D7 883 aaKnown RBP12.42□□□□□ -0.42
PRKD1-206ENST00000547441 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
PRKD1-206ENST00000547441 PITPNM2Q9BZ72 1349 aa12.41□□□□□ -0.42
PRKD1-206ENST00000547441 BRCA2P51587 3418 aa12.41□□□□□ -0.42
PRKD1-206ENST00000547441 UFL1O94874 794 aa12.41□□□□□ -0.42
PRKD1-206ENST00000547441 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
PRKD1-206ENST00000547441 NEXNQ0ZGT2 675 aa12.41□□□□□ -0.42
PRKD1-206ENST00000547441 RSBN1LQ6PCB5 846 aaPredicted RBP12.41□□□□□ -0.42
PRKD1-206ENST00000547441 ZBTB38Q8NAP3 1195 aaPredicted RBP12.41□□□□□ -0.42
PRKD1-206ENST00000547441 ZNF296Q8WUU4 475 aaPredicted RBP12.41□□□□□ -0.42
PRKD1-206ENST00000547441 HDAC9Q9UKV0 1011 aa12.41□□□□□ -0.42
PRKD1-206ENST00000547441 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 G3V3G9 751 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
PRKD1-206ENST00000547441 FLIIQ13045 1269 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 NOM1Q5C9Z4 860 aaKnown RBP12.4□□□□□ -0.42
PRKD1-206ENST00000547441 RTL5Q5HYW3 569 aaPredicted RBP12.4□□□□□ -0.42
PRKD1-206ENST00000547441 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 GMLQ99445 158 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 MYD88Q99836 296 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
PRKD1-206ENST00000547441 GGA1Q9UJY5 639 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
PRKD1-206ENST00000547441 TBC1D8O95759 1140 aa12.39□□□□□ -0.43
PRKD1-206ENST00000547441 PCCAP05165 728 aaPredicted RBP12.39□□□□□ -0.43
PRKD1-206ENST00000547441 PSEN1P49768 467 aa12.39□□□□□ -0.43
PRKD1-206ENST00000547441 SLFN5Q08AF3 891 aa12.39□□□□□ -0.43
PRKD1-206ENST00000547441 MOB2Q70IA6 237 aa12.39□□□□□ -0.43
PRKD1-206ENST00000547441 MYOZ2Q9NPC6 264 aa12.39□□□□□ -0.43
PRKD1-206ENST00000547441 ANKIB1Q9P2G1 1089 aa12.39□□□□□ -0.43
PRKD1-206ENST00000547441 UBE2Q2LH0YL09 131 aa12.38□□□□□ -0.43
PRKD1-206ENST00000547441 CT47B1P0C2W7 299 aaPredicted RBP12.38□□□□□ -0.43
PRKD1-206ENST00000547441 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms