RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 ADARB2Q9NS39 739 aaKnown RBP30.06■■■□□ 2.4
RBFOX1-209ENST00000547427 CNOT7Q9UIV1 285 aaKnown RBP30.06■■■□□ 2.4
RBFOX1-209ENST00000547427 RCAN3Q9UKA8 241 aa30.06■■■□□ 2.4
RBFOX1-209ENST00000547427 H7C1D1 291 aa30.05■■■□□ 2.4
RBFOX1-209ENST00000547427 VIL1P09327 827 aaKnown RBP30.05■■■□□ 2.4
RBFOX1-209ENST00000547427 METTL24Q5JXM2 366 aa30.05■■■□□ 2.4
RBFOX1-209ENST00000547427 USP50Q70EL3 339 aaPredicted RBP30.05■■■□□ 2.4
RBFOX1-209ENST00000547427 ITPRIPQ8IWB1 547 aa30.05■■■□□ 2.4
RBFOX1-209ENST00000547427 DPF2Q92785 391 aa30.05■■■□□ 2.4
RBFOX1-209ENST00000547427 FBXW7Q969H0 707 aa30.05■■■□□ 2.4
RBFOX1-209ENST00000547427 USP17L3A6NCW0 530 aa30.04■■■□□ 2.4
RBFOX1-209ENST00000547427 USP17L4A6NCW7 530 aa30.04■■■□□ 2.4
RBFOX1-209ENST00000547427 USP17L1Q7RTZ2 530 aa30.04■■■□□ 2.4
RBFOX1-209ENST00000547427 GNAI2P04899 355 aa30.03■■■□□ 2.4
RBFOX1-209ENST00000547427 RFX5P48382 616 aaPredicted RBP30.03■■■□□ 2.4
RBFOX1-209ENST00000547427 ZNF804AQ7Z570 1209 aa30.03■■■□□ 2.4
RBFOX1-209ENST00000547427 MICALL2Q8IY33 904 aa30.03■■■□□ 2.4
RBFOX1-209ENST00000547427 PTPN12Q05209 780 aaKnown RBP30.02■■■□□ 2.4
RBFOX1-209ENST00000547427 UBE4AQ14139 1066 aa30.02■■■□□ 2.4
RBFOX1-209ENST00000547427 C15orf52Q6ZUT6 534 aaKnown RBP30.02■■■□□ 2.4
RBFOX1-209ENST00000547427 ADAMTSL1Q8N6G6 1762 aa30.02■■■□□ 2.4
RBFOX1-209ENST00000547427 MS4A1P11836 297 aa30.01■■■□□ 2.39
RBFOX1-209ENST00000547427 APLP1P51693 650 aa30.01■■■□□ 2.39
RBFOX1-209ENST00000547427 RSBN1LQ6PCB5 846 aaPredicted RBP30.01■■■□□ 2.39
RBFOX1-209ENST00000547427 SIL1Q9H173 461 aa30.01■■■□□ 2.39
RBFOX1-209ENST00000547427 EYA2O00167 538 aa30■■■□□ 2.39
RBFOX1-209ENST00000547427 RLBP1P12271 317 aa30■■■□□ 2.39
RBFOX1-209ENST00000547427 AGBL3Q8NEM8 1001 aa30■■■□□ 2.39
RBFOX1-209ENST00000547427 SHTN1A0MZ66 631 aa29.99■■■□□ 2.39
RBFOX1-209ENST00000547427 CD209Q9NNX6 404 aa29.99■■■□□ 2.39
RBFOX1-209ENST00000547427 SRGAP3O43295 1099 aa29.98■■■□□ 2.39
RBFOX1-209ENST00000547427 PDE8BO95263 885 aa29.98■■■□□ 2.39
RBFOX1-209ENST00000547427 STRIP1Q5VSL9 837 aa29.98■■■□□ 2.39
RBFOX1-209ENST00000547427 MAP1SQ66K74 1059 aaPredicted RBP29.98■■■□□ 2.39
RBFOX1-209ENST00000547427 IRS2Q9Y4H2 1338 aa29.97■■■□□ 2.39
RBFOX1-209ENST00000547427 TTLL5Q6EMB2 1281 aa29.97■■■□□ 2.39
RBFOX1-209ENST00000547427 PANK1Q8TE04 598 aa29.97■■■□□ 2.39
RBFOX1-209ENST00000547427 FBXO3Q9UK99 471 aa29.97■■■□□ 2.39
RBFOX1-209ENST00000547427 GTF2IP78347 998 aa29.96■■■□□ 2.39
RBFOX1-209ENST00000547427 RBM26Q5T8P6 1007 aaKnown RBP29.96■■■□□ 2.39
RBFOX1-209ENST00000547427 CNTROBQ8N137 903 aa29.96■■■□□ 2.39
RBFOX1-209ENST00000547427 PA2G4Q9UQ80 394 aaKnown RBP29.96■■■□□ 2.39
RBFOX1-209ENST00000547427 MTX1Q13505 466 aa29.95■■■□□ 2.39
RBFOX1-209ENST00000547427 TBC1D10BQ4KMP7 808 aaPredicted RBP29.95■■■□□ 2.39
RBFOX1-209ENST00000547427 SAMD7Q7Z3H4 446 aa29.95■■■□□ 2.39
RBFOX1-209ENST00000547427 TRPM4Q8TD43 1214 aa29.95■■■□□ 2.39
RBFOX1-209ENST00000547427 CIAO1O76071 339 aa29.94■■■□□ 2.38
RBFOX1-209ENST00000547427 GYG1P46976 350 aa29.94■■■□□ 2.38
RBFOX1-209ENST00000547427 DACT2Q5SW24 774 aa29.94■■■□□ 2.38
RBFOX1-209ENST00000547427 VPS37DQ86XT2 251 aa29.94■■■□□ 2.38
RBFOX1-209ENST00000547427 VGLL2Q8N8G2 317 aa29.94■■■□□ 2.38
RBFOX1-209ENST00000547427 MYO3BQ8WXR4 1341 aa29.94■■■□□ 2.38
RBFOX1-209ENST00000547427 USP17L8P0C7I0 530 aa29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 IL1R1P14778 569 aa29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 HIBADHP31937 336 aaKnown RBP29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 PUM3Q15397 648 aaKnown RBP29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 CAVIN4Q5BKX8 364 aa29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 ATG9AQ7Z3C6 839 aa29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 MXD3Q9BW11 206 aa29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 COPRSQ9NQ92 184 aa29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 CEP126Q9P2H0 1117 aa29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 ZNF609O15014 1411 aa29.93■■■□□ 2.38
RBFOX1-209ENST00000547427 ZNF646O15015 1829 aaPredicted RBP29.92■■■□□ 2.38
RBFOX1-209ENST00000547427 ZBTB7BO15156 539 aaPredicted RBP29.92■■■□□ 2.38
RBFOX1-209ENST00000547427 IFIT1P09914 478 aaKnown RBP29.92■■■□□ 2.38
RBFOX1-209ENST00000547427 IL15P40933 162 aaPredicted RBP29.92■■■□□ 2.38
RBFOX1-209ENST00000547427 HIRAP54198 1017 aaPredicted RBP29.92■■■□□ 2.38
RBFOX1-209ENST00000547427 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.92■■■□□ 2.38
RBFOX1-209ENST00000547427 KIF4BQ2VIQ3 1234 aa29.91■■■□□ 2.38
RBFOX1-209ENST00000547427 OGFOD1Q8N543 542 aa29.91■■■□□ 2.38
RBFOX1-209ENST00000547427 FAM84BQ96KN1 310 aaPredicted RBP29.91■■■□□ 2.38
RBFOX1-209ENST00000547427 GMLQ99445 158 aa29.91■■■□□ 2.38
RBFOX1-209ENST00000547427 ITGBL1O95965 494 aaPredicted RBP29.9■■■□□ 2.38
RBFOX1-209ENST00000547427 SLC5A1P13866 664 aa29.9■■■□□ 2.38
RBFOX1-209ENST00000547427 ZC3H15Q8WU90 426 aaKnown RBP29.9■■■□□ 2.38
RBFOX1-209ENST00000547427 C1orf115Q9H7X2 142 aa29.9■■■□□ 2.38
RBFOX1-209ENST00000547427 PNMA6EA0A0J9YXQ4 647 aa29.88■■■□□ 2.37
RBFOX1-209ENST00000547427 FRAT2O75474 233 aaPredicted RBP29.88■■■□□ 2.37
RBFOX1-209ENST00000547427 EGFRP00533 1210 aa29.88■■■□□ 2.37
RBFOX1-209ENST00000547427 ZNF280AP59817 542 aaPredicted RBP29.88■■■□□ 2.37
RBFOX1-209ENST00000547427 HTRA3P83110 453 aa29.88■■■□□ 2.37
RBFOX1-209ENST00000547427 LPIN2Q92539 896 aa29.88■■■□□ 2.37
RBFOX1-209ENST00000547427 PASKQ96RG2 1323 aa29.88■■■□□ 2.37
RBFOX1-209ENST00000547427 SASH1O94885 1247 aa29.87■■■□□ 2.37
RBFOX1-209ENST00000547427 TDRD7Q8NHU6 1098 aaKnown RBP29.87■■■□□ 2.37
RBFOX1-209ENST00000547427 MYOZ2Q9NPC6 264 aa29.87■■■□□ 2.37
RBFOX1-209ENST00000547427 JAG2Q9Y219 1238 aa29.87■■■□□ 2.37
RBFOX1-209ENST00000547427 FGFR2P21802 821 aa29.86■■■□□ 2.37
RBFOX1-209ENST00000547427 MVPQ14764 893 aaKnown RBP29.86■■■□□ 2.37
RBFOX1-209ENST00000547427 ATP2B3Q16720 1220 aa29.86■■■□□ 2.37
RBFOX1-209ENST00000547427 FBXO33Q7Z6M2 555 aa29.86■■■□□ 2.37
RBFOX1-209ENST00000547427 KIAA0825Q8IV33 1275 aa29.86■■■□□ 2.37
RBFOX1-209ENST00000547427 PGAP2Q9UHJ9 254 aa29.86■■■□□ 2.37
RBFOX1-209ENST00000547427 HDAC9Q9UKV0 1011 aa29.86■■■□□ 2.37
RBFOX1-209ENST00000547427 COG6Q9Y2V7 657 aa29.86■■■□□ 2.37
RBFOX1-209ENST00000547427 POLR2AP24928 1970 aaKnown RBP29.85■■■□□ 2.37
RBFOX1-209ENST00000547427 ATP8B2P98198 1209 aa29.85■■■□□ 2.37
RBFOX1-209ENST00000547427 IQSEC3Q9UPP2 1182 aaPredicted RBP29.85■■■□□ 2.37
RBFOX1-209ENST00000547427 BCAMP50895 628 aa29.84■■■□□ 2.37
RBFOX1-209ENST00000547427 G3BP1Q13283 466 aaKnown RBP eCLIP29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms