RNA–Protein interactions for RNA: ENST00000547273.1

PPFIA2-208, Transcript of PTPRF interacting protein alpha 2, human

TSL 3

Gene PPFIA2, Length 371 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA2-208	ENST00000547273	PDE6B	P35913	854 aa		10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	PTGER2	P43116	358 aa		10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	IFIT5	Q13325	482 aa	Known RBP	10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	CCDC57	Q2TAC2	916 aa		10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	SIRT2	Q8IXJ6	389 aa		10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	GREM2	Q9H772	168 aa		10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	PDZRN3	Q9UPQ7	1066 aa		10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	GTF3C3	Q9Y5Q9	886 aa		10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	ARFGEF1	Q9Y6D6	1849 aa		10.04	□□□□□ -0.8
PPFIA2-208	ENST00000547273	ANKRD18B	A2A2Z9	1011 aa		10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	ITGA6	P23229	1130 aa		10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	RFX5	P48382	616 aa	Predicted RBP	10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	OXER1	Q8TDS5	423 aa		10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	RPGR	Q92834	1020 aa	Known RBP	10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	CCDC136	Q96JN2	1154 aa		10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	CDC5L	Q99459	802 aa	Known RBP	10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	RWDD1	Q9H446	243 aa	Predicted RBP	10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	PCDHGA4	Q9Y5G9	962 aa		10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	SLX4	Q8IY92	1834 aa		10.03	□□□□□ -0.8
PPFIA2-208	ENST00000547273	NPR1	P16066	1061 aa		10.02	□□□□□ -0.81
PPFIA2-208	ENST00000547273	E2F4	Q16254	413 aa		10.02	□□□□□ -0.81
PPFIA2-208	ENST00000547273	TAF7L	Q5H9L4	462 aa		10.02	□□□□□ -0.81
PPFIA2-208	ENST00000547273	GPR153	Q6NV75	609 aa		10.02	□□□□□ -0.81
PPFIA2-208	ENST00000547273	DDX46	Q7L014	1031 aa	Known RBP	10.02	□□□□□ -0.81
PPFIA2-208	ENST00000547273	COPRS	Q9NQ92	184 aa		10.02	□□□□□ -0.81
PPFIA2-208	ENST00000547273	KDM2B	Q8NHM5	1336 aa		10.02	□□□□□ -0.81
PPFIA2-208	ENST00000547273	SRGN	P10124	158 aa		10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	HOXA10	P31260	410 aa	Predicted RBP	10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	IGHMBP2	P38935	993 aa	Known RBP	10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	PTPN12	Q05209	780 aa	Known RBP	10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	GRAP	Q13588	217 aa		10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	HSP90AB4P	Q58FF6	505 aa		10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	STYK1	Q6J9G0	422 aa		10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	C2CD5	Q86YS7	1000 aa		10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	GRAPL	Q8TC17	118 aa	Predicted RBP	10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	RBM17	Q96I25	401 aa	Known RBP	10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	NOP58	Q9Y2X3	529 aa	Known RBP	10.01	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ZNF609	O15014	1411 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	MYH13	Q9UKX3	1938 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273		H0YIN7	160 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	CIAO1	O76071	339 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	B4GALNT3	Q6L9W6	998 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ERC1	Q8IUD2	1116 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ANKRD18A	Q8IVF6	992 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	SMC5	Q8IY18	1101 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	GCC1	Q96CN9	775 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	MASTL	Q96GX5	879 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	CRAMP1	Q96RY5	1269 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	SEC31B	Q9NQW1	1179 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	PA2G4	Q9UQ80	394 aa	Known RBP	10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	EXOC6B	Q9Y2D4	811 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	CD2AP	Q9Y5K6	639 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	DUOX1	Q9NRD9	1551 aa		10	□□□□□ -0.81
PPFIA2-208	ENST00000547273	EYA2	O00167	538 aa		9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	RAB11FIP3	O75154	756 aa		9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	SURF6	O75683	361 aa	Known RBP	9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	IGHD	P01880	384 aa		9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	TGFB2	P61812	414 aa		9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	OS9	Q13438	667 aa	Predicted RBP	9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	TMC4	Q7Z404	712 aa		9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	KLHDC4	Q8TBB5	520 aa		9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	CELF1	Q92879	486 aa	Known RBP	9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ZNF594	Q96JF6	807 aa	Predicted RBP	9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	SIL1	Q9H173	461 aa		9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	DCTPP1	Q9H773	170 aa		9.99	□□□□□ -0.81
PPFIA2-208	ENST00000547273	FER1L6	Q2WGJ9	1857 aa		9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	PPEF1	O14829	653 aa	Predicted RBP	9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	CHRNA5	P30532	468 aa		9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	IL15	P40933	162 aa	Predicted RBP	9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	EMP3	P54852	163 aa		9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	G3BP1	Q13283	466 aa	Known RBP eCLIP	9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	LDHAL6A	Q6ZMR3	332 aa		9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	CNKSR1	Q969H4	720 aa		9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	MPHOSPH8	Q99549	860 aa		9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	CNNM1	Q9NRU3	951 aa		9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	BSDC1	Q9NW68	430 aa	Predicted RBP	9.98	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ALDH1B1	P30837	517 aa		9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	RPS8	P62241	208 aa	Known RBP	9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	MAP3K9	P80192	1104 aa		9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ARSI	Q5FYB1	569 aa		9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	PRPF40B	Q6NWY9	871 aa	Known RBP	9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ATG9A	Q7Z3C6	839 aa		9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	ZNF622	Q969S3	477 aa	Known RBP eCLIP	9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	KIF1BP	Q96EK5	621 aa		9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	LRRCC1	Q9C099	1032 aa		9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	PPP1R1B	Q9UD71	204 aa	Predicted RBP	9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	MROH5	Q6ZUA9	1318 aa		9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	SNED1	Q8TER0	1413 aa		9.97	□□□□□ -0.81
PPFIA2-208	ENST00000547273	BBOX1	O75936	387 aa		9.96	□□□□□ -0.82
PPFIA2-208	ENST00000547273	DPEP1	P16444	411 aa		9.96	□□□□□ -0.82
PPFIA2-208	ENST00000547273	LRRC24	Q50LG9	513 aa		9.96	□□□□□ -0.82
PPFIA2-208	ENST00000547273	METTL24	Q5JXM2	366 aa		9.96	□□□□□ -0.82
PPFIA2-208	ENST00000547273	RHPN1	Q8TCX5	695 aa		9.96	□□□□□ -0.82
PPFIA2-208	ENST00000547273	PUS3	Q9BZE2	481 aa	Known RBP	9.96	□□□□□ -0.82
PPFIA2-208	ENST00000547273	RIPOR2	Q9Y4F9	1068 aa		9.96	□□□□□ -0.82
PPFIA2-208	ENST00000547273	AK9	Q5TCS8	1911 aa		9.95	□□□□□ -0.82
PPFIA2-208	ENST00000547273		A0A0G2JLW4	131 aa		9.95	□□□□□ -0.82

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