RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 PUM3Q15397 648 aaKnown RBP22.17■■□□□ 1.14
VDR-204ENST00000547065 CCDC152Q4G0S7 254 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 GAS2L3Q86XJ1 694 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 LPIN2Q92539 896 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.17■■□□□ 1.14
VDR-204ENST00000547065 CTNNA3Q9UI47 895 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 MYH3P11055 1940 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 F13A1P00488 732 aa22.16■■□□□ 1.14
VDR-204ENST00000547065 WASHC4Q2M389 1173 aa22.16■■□□□ 1.14
VDR-204ENST00000547065 DHX32Q7L7V1 743 aaKnown RBP22.16■■□□□ 1.14
VDR-204ENST00000547065 APPBP2Q92624 585 aa22.16■■□□□ 1.14
VDR-204ENST00000547065 RTL9Q8NET4 1388 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 FAM177BA6PVY3 158 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 NTSR2O95665 410 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 PDCP20941 246 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 FGFR2P21802 821 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 MCAMP43121 646 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 Q6ZUG5 572 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 MTMR6Q9Y217 621 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 ZSCAN23Q3MJ62 389 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 STOX1Q6ZVD7 989 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 TMEM87AQ8NBN3 555 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 MPHOSPH8Q99549 860 aa22.15■■□□□ 1.14
VDR-204ENST00000547065 RGL2O15211 777 aa22.14■■□□□ 1.13
VDR-204ENST00000547065 ARID4AP29374 1257 aaPredicted RBP22.14■■□□□ 1.13
VDR-204ENST00000547065 CCDC102BQ68D86 513 aa22.14■■□□□ 1.13
VDR-204ENST00000547065 SLC5A1P13866 664 aa22.13■■□□□ 1.13
VDR-204ENST00000547065 LARP1BQ659C4 914 aaKnown RBP22.13■■□□□ 1.13
VDR-204ENST00000547065 USP48Q86UV5 1035 aa22.13■■□□□ 1.13
VDR-204ENST00000547065 LINC00116Q8NCU8 138 aa22.13■■□□□ 1.13
VDR-204ENST00000547065 E7EWF7 191 aa22.12■■□□□ 1.13
VDR-204ENST00000547065 EXOSC10Q01780 885 aaKnown RBP22.12■■□□□ 1.13
VDR-204ENST00000547065 ZNF831Q5JPB2 1677 aa22.12■■□□□ 1.13
VDR-204ENST00000547065 IGHMBP2P38935 993 aaKnown RBP22.12■■□□□ 1.13
VDR-204ENST00000547065 FOXD4L6Q3SYB3 417 aaPredicted RBP22.12■■□□□ 1.13
VDR-204ENST00000547065 PI16Q6UXB8 463 aa22.12■■□□□ 1.13
VDR-204ENST00000547065 FOXD4L3Q6VB84 417 aaPredicted RBP22.12■■□□□ 1.13
VDR-204ENST00000547065 GTF3C6Q969F1 213 aa22.12■■□□□ 1.13
VDR-204ENST00000547065 SEC31BQ9NQW1 1179 aa22.12■■□□□ 1.13
VDR-204ENST00000547065 MYH14Q7Z406 1995 aaKnown RBP22.11■■□□□ 1.13
VDR-204ENST00000547065 CNTNAP4Q9C0A0 1308 aa22.11■■□□□ 1.13
VDR-204ENST00000547065 LRP5O75197 1615 aa22.11■■□□□ 1.13
VDR-204ENST00000547065 PHKA1P46020 1223 aa22.11■■□□□ 1.13
VDR-204ENST00000547065 FGD1P98174 961 aa22.11■■□□□ 1.13
VDR-204ENST00000547065 HELBQ8NG08 1087 aaPredicted RBP22.11■■□□□ 1.13
VDR-204ENST00000547065 SPATA31A6Q5VVP1 1343 aa22.1■■□□□ 1.13
VDR-204ENST00000547065 ADD2P35612 726 aa22.1■■□□□ 1.13
VDR-204ENST00000547065 RC3H1Q5TC82 1133 aaKnown RBP22.1■■□□□ 1.13
VDR-204ENST00000547065 USP21Q9UK80 565 aa22.1■■□□□ 1.13
VDR-204ENST00000547065 STK3Q13188 491 aa22.1■■□□□ 1.13
VDR-204ENST00000547065 UBE3CQ15386 1083 aa22.1■■□□□ 1.13
VDR-204ENST00000547065 IMMTQ16891 758 aaKnown RBP22.1■■□□□ 1.13
VDR-204ENST00000547065 CSPP1Q1MSJ5 1256 aa22.1■■□□□ 1.13
VDR-204ENST00000547065 AGXT2Q9BYV1 514 aa22.1■■□□□ 1.13
VDR-204ENST00000547065 PUS7LQ9H0K6 701 aaKnown RBP22.1■■□□□ 1.13
VDR-204ENST00000547065 RBM27Q9P2N5 1060 aaKnown RBP22.1■■□□□ 1.13
VDR-204ENST00000547065 NSFL1CQ9UNZ2 370 aaKnown RBP22.1■■□□□ 1.13
VDR-204ENST00000547065 VPS37CA5D8V6 355 aaPredicted RBP22.09■■□□□ 1.13
VDR-204ENST00000547065 SLC9C2Q5TAH2 1124 aa22.09■■□□□ 1.13
VDR-204ENST00000547065 BRF1Q92994 677 aa22.09■■□□□ 1.13
VDR-204ENST00000547065 SYAP1Q96A49 352 aaPredicted RBP22.09■■□□□ 1.13
VDR-204ENST00000547065 PIH1D3Q9NQM4 214 aaKnown RBP22.09■■□□□ 1.13
VDR-204ENST00000547065 CNPY2Q9Y2B0 182 aa22.09■■□□□ 1.13
VDR-204ENST00000547065 GPAA1O43292 621 aa22.08■■□□□ 1.13
VDR-204ENST00000547065 PFKFB2O60825 505 aa22.08■■□□□ 1.13
VDR-204ENST00000547065 LLPHQ9BRT6 129 aaKnown RBP22.08■■□□□ 1.13
VDR-204ENST00000547065 PANK2Q9BZ23 570 aa22.08■■□□□ 1.13
VDR-204ENST00000547065 TMEM63CQ9P1W3 806 aa22.08■■□□□ 1.13
VDR-204ENST00000547065 FOXP2O15409 715 aa22.07■■□□□ 1.12
VDR-204ENST00000547065 FGAP02671 866 aa22.07■■□□□ 1.12
VDR-204ENST00000547065 TTLL5Q6EMB2 1281 aa22.07■■□□□ 1.12
VDR-204ENST00000547065 FBXL16Q8N461 479 aa22.07■■□□□ 1.12
VDR-204ENST00000547065 CHMP4CQ96CF2 233 aa22.07■■□□□ 1.12
VDR-204ENST00000547065 GDPD2Q9HCC8 539 aa22.07■■□□□ 1.12
VDR-204ENST00000547065 COL5A3P25940 1745 aaPredicted RBP22.07■■□□□ 1.12
VDR-204ENST00000547065 CDC5LQ99459 802 aaKnown RBP22.07■■□□□ 1.12
VDR-204ENST00000547065 LRRC2Q9BYS8 371 aa22.07■■□□□ 1.12
VDR-204ENST00000547065 A0A0G2JLW4 131 aa22.06■■□□□ 1.12
VDR-204ENST00000547065 GADD45BO75293 160 aaPredicted RBP22.06■■□□□ 1.12
VDR-204ENST00000547065 SPATA5Q8NB90 893 aa22.06■■□□□ 1.12
VDR-204ENST00000547065 DTNBO60941 627 aa22.05■■□□□ 1.12
VDR-204ENST00000547065 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
VDR-204ENST00000547065 IDH1O75874 414 aaKnown RBP22.05■■□□□ 1.12
VDR-204ENST00000547065 SF3B3Q15393 1217 aaKnown RBP22.05■■□□□ 1.12
VDR-204ENST00000547065 AKAP11Q9UKA4 1901 aa22.05■■□□□ 1.12
VDR-204ENST00000547065 PDE6AP16499 860 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 UBE2HP62256 183 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 ERFEQ4G0M1 354 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 SLC10A5Q5PT55 438 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 ZNF274Q96GC6 653 aaPredicted RBP22.04■■□□□ 1.12
VDR-204ENST00000547065 ATRNO75882 1429 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 ZNF213O14771 459 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 SCRN1Q12765 414 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 LRSAM1Q6UWE0 723 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 ZNF532Q9HCE3 1301 aa22.04■■□□□ 1.12
VDR-204ENST00000547065 DDX60Q8IY21 1712 aaKnown RBP22.03■■□□□ 1.12
VDR-204ENST00000547065 DNM1Q05193 864 aaKnown RBP22.03■■□□□ 1.12
VDR-204ENST00000547065 APOBRQ0VD83 1088 aa22.03■■□□□ 1.12
VDR-204ENST00000547065 PTF1AQ7RTS3 328 aa22.03■■□□□ 1.12
VDR-204ENST00000547065 SMARCC2Q8TAQ2 1214 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms