RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 COA1Q9GZY4 146 aa18.28■□□□□ 0.52
COL2A1-209ENST00000546974 ANKRD18BA2A2Z9 1011 aa18.27■□□□□ 0.52
COL2A1-209ENST00000546974 USP17L8P0C7I0 530 aa18.27■□□□□ 0.52
COL2A1-209ENST00000546974 FOXO4P98177 505 aa18.27■□□□□ 0.52
COL2A1-209ENST00000546974 ZNF804BA4D1E1 1349 aa18.26■□□□□ 0.51
COL2A1-209ENST00000546974 HSPA8P11142 646 aaKnown RBP18.26■□□□□ 0.51
COL2A1-209ENST00000546974 LBX1P52954 281 aa18.26■□□□□ 0.51
COL2A1-209ENST00000546974 DLK2Q6UY11 383 aa18.26■□□□□ 0.51
COL2A1-209ENST00000546974 BEGAINQ9BUH8 593 aa18.26■□□□□ 0.51
COL2A1-209ENST00000546974 MYOZ2Q9NPC6 264 aa18.26■□□□□ 0.51
COL2A1-209ENST00000546974 GGA3Q9NZ52 723 aa18.26■□□□□ 0.51
COL2A1-209ENST00000546974 ZNF646O15015 1829 aaPredicted RBP18.26■□□□□ 0.51
COL2A1-209ENST00000546974 ADM5C9JUS6 153 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 GRM8O00222 908 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 AOC2O75106 756 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 CHRNDQ07001 517 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 IFIT5Q13325 482 aaKnown RBP18.25■□□□□ 0.51
COL2A1-209ENST00000546974 SCARF1Q14162 830 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 DACT2Q5SW24 774 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 SULF1Q8IWU6 871 aa18.25■□□□□ 0.51
COL2A1-209ENST00000546974 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
COL2A1-209ENST00000546974 HUNKP57058 714 aa18.24■□□□□ 0.51
COL2A1-209ENST00000546974 C2orf69Q8N8R5 385 aa18.24■□□□□ 0.51
COL2A1-209ENST00000546974 GBA2Q9HCG7 927 aaPredicted RBP18.24■□□□□ 0.51
COL2A1-209ENST00000546974 ASTN2O75129 1339 aaPredicted RBP18.23■□□□□ 0.51
COL2A1-209ENST00000546974 MYO3BQ8WXR4 1341 aa18.23■□□□□ 0.51
COL2A1-209ENST00000546974 KCNJ4P48050 445 aa18.23■□□□□ 0.51
COL2A1-209ENST00000546974 MMP14P50281 582 aa18.23■□□□□ 0.51
COL2A1-209ENST00000546974 ANGEL2Q5VTE6 544 aaKnown RBP18.23■□□□□ 0.51
COL2A1-209ENST00000546974 C9orf78Q9NZ63 289 aaPredicted RBP18.23■□□□□ 0.51
COL2A1-209ENST00000546974 CHMP3Q9Y3E7 222 aa18.23■□□□□ 0.51
COL2A1-209ENST00000546974 PITPNM2Q9BZ72 1349 aa18.23■□□□□ 0.51
COL2A1-209ENST00000546974 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 CAPN15O75808 1086 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 KLRK1P26718 216 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 EPHA10Q5JZY3 1008 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 SLC4A10Q6U841 1118 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 LMBR1LQ6UX01 489 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 OGFOD1Q8N543 542 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 FBXW7Q969H0 707 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 SRCIN1Q9C0H9 1055 aa18.22■□□□□ 0.51
COL2A1-209ENST00000546974 E9PSI1 815 aa18.21■□□□□ 0.51
COL2A1-209ENST00000546974 BRPF1P55201 1214 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-209ENST00000546974 NOGQ13253 232 aa18.21■□□□□ 0.51
COL2A1-209ENST00000546974 CCDC57Q2TAC2 916 aa18.21■□□□□ 0.51
COL2A1-209ENST00000546974 TTLL5Q6EMB2 1281 aa18.21■□□□□ 0.51
COL2A1-209ENST00000546974 C15orf52Q6ZUT6 534 aaKnown RBP18.21■□□□□ 0.51
COL2A1-209ENST00000546974 CDCA5Q96FF9 252 aa18.21■□□□□ 0.51
COL2A1-209ENST00000546974 MXD3Q9BW11 206 aa18.21■□□□□ 0.51
COL2A1-209ENST00000546974 CA12O43570 354 aa18.2■□□□□ 0.5
COL2A1-209ENST00000546974 RGMBQ6NW40 437 aa18.2■□□□□ 0.5
COL2A1-209ENST00000546974 MRPL50Q8N5N7 158 aaKnown RBP18.2■□□□□ 0.5
COL2A1-209ENST00000546974 CD209Q9NNX6 404 aa18.2■□□□□ 0.5
COL2A1-209ENST00000546974 IRS2Q9Y4H2 1338 aa18.2■□□□□ 0.5
COL2A1-209ENST00000546974 TAF5LO75529 589 aa18.19■□□□□ 0.5
COL2A1-209ENST00000546974 TAF7LQ5H9L4 462 aa18.19■□□□□ 0.5
COL2A1-209ENST00000546974 HELBQ8NG08 1087 aaPredicted RBP18.19■□□□□ 0.5
COL2A1-209ENST00000546974 CCDC102AQ96A19 550 aa18.19■□□□□ 0.5
COL2A1-209ENST00000546974 SNAP23O00161 211 aa18.18■□□□□ 0.5
COL2A1-209ENST00000546974 GTF2IP78347 998 aa18.18■□□□□ 0.5
COL2A1-209ENST00000546974 NBPF9Q3BBW0 867 aa18.18■□□□□ 0.5
COL2A1-209ENST00000546974 LDHAL6AQ6ZMR3 332 aa18.18■□□□□ 0.5
COL2A1-209ENST00000546974 ZNF594Q96JF6 807 aaPredicted RBP18.18■□□□□ 0.5
COL2A1-209ENST00000546974 HDAC9Q9UKV0 1011 aa18.18■□□□□ 0.5
COL2A1-209ENST00000546974 UTYO14607 1347 aa18.18■□□□□ 0.5
COL2A1-209ENST00000546974 PTPRCP08575 1304 aa18.18■□□□□ 0.5
COL2A1-209ENST00000546974 FAM155AB1AL88 458 aaPredicted RBP18.17■□□□□ 0.5
COL2A1-209ENST00000546974 WNT10BO00744 389 aa18.17■□□□□ 0.5
COL2A1-209ENST00000546974 ZNF157P51786 506 aaPredicted RBP18.17■□□□□ 0.5
COL2A1-209ENST00000546974 FKBP1BP68106 108 aa18.17■□□□□ 0.5
COL2A1-209ENST00000546974 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
COL2A1-209ENST00000546974 SUCLG2Q96I99 432 aa18.17■□□□□ 0.5
COL2A1-209ENST00000546974 CNNM1Q9NRU3 951 aa18.17■□□□□ 0.5
COL2A1-209ENST00000546974 NBPF7P0C2Y1 421 aaPredicted RBP18.16■□□□□ 0.5
COL2A1-209ENST00000546974 ZNF804AQ7Z570 1209 aa18.16■□□□□ 0.5
COL2A1-209ENST00000546974 KAZALD1Q96I82 304 aa18.16■□□□□ 0.5
COL2A1-209ENST00000546974 ZIC5Q96T25 663 aa18.16■□□□□ 0.5
COL2A1-209ENST00000546974 PAPPA2Q9BXP8 1791 aa18.15■□□□□ 0.5
COL2A1-209ENST00000546974 IL1R1P14778 569 aa18.15■□□□□ 0.5
COL2A1-209ENST00000546974 KIAA0825Q8IV33 1275 aa18.15■□□□□ 0.5
COL2A1-209ENST00000546974 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
COL2A1-209ENST00000546974 CASP8AP2Q9UKL3 1982 aa18.15■□□□□ 0.5
COL2A1-209ENST00000546974 AKAP11Q9UKA4 1901 aa18.14■□□□□ 0.49
COL2A1-209ENST00000546974 PLIN1O60240 522 aa18.14■□□□□ 0.49
COL2A1-209ENST00000546974 SLC10A3P09131 477 aa18.14■□□□□ 0.49
COL2A1-209ENST00000546974 FKBP1AP62942 108 aaKnown RBP18.14■□□□□ 0.49
COL2A1-209ENST00000546974 ZBED3Q96IU2 234 aaPredicted RBP18.14■□□□□ 0.49
COL2A1-209ENST00000546974 TSKSQ9UJT2 592 aa18.14■□□□□ 0.49
COL2A1-209ENST00000546974 SCAF8Q9UPN6 1271 aaKnown RBP18.14■□□□□ 0.49
COL2A1-209ENST00000546974 UBE4AQ14139 1066 aa18.13■□□□□ 0.49
COL2A1-209ENST00000546974 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
COL2A1-209ENST00000546974 RABL6Q3YEC7 729 aaPredicted RBP18.13■□□□□ 0.49
COL2A1-209ENST00000546974 SASH1O94885 1247 aa18.12■□□□□ 0.49
COL2A1-209ENST00000546974 KIF23Q02241 960 aaPredicted RBP18.12■□□□□ 0.49
COL2A1-209ENST00000546974 APOBEC3FQ8IUX4 373 aaKnown RBP18.12■□□□□ 0.49
COL2A1-209ENST00000546974 TRMT2AQ8IZ69 625 aaKnown RBP18.12■□□□□ 0.49
COL2A1-209ENST00000546974 CERS5Q8N5B7 392 aa18.12■□□□□ 0.49
COL2A1-209ENST00000546974 MTMR14Q8NCE2 650 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms