RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 GCKRQ14397 625 aa25.69■■□□□ 1.7
SCN8A-204ENST00000546961 SALL2Q9Y467 1007 aaPredicted RBP25.69■■□□□ 1.7
SCN8A-204ENST00000546961 TRPA1O75762 1119 aa25.68■■□□□ 1.7
SCN8A-204ENST00000546961 FLIIQ13045 1269 aa25.68■■□□□ 1.7
SCN8A-204ENST00000546961 FAM161AQ3B820 660 aa25.68■■□□□ 1.7
SCN8A-204ENST00000546961 IL16Q14005 1332 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 FKBP5Q13451 457 aaPredicted RBP25.67■■□□□ 1.7
SCN8A-204ENST00000546961 NBPF9Q3BBW0 867 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 DACT2Q5SW24 774 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 TXNRD3Q86VQ6 643 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 OGFOD1Q8N543 542 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 CSRNP1Q96S65 589 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 COA1Q9GZY4 146 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 RNF186Q9NXI6 227 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 LEMD3Q9Y2U8 911 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 MED23Q9ULK4 1368 aa25.67■■□□□ 1.7
SCN8A-204ENST00000546961 ZNF609O15014 1411 aa25.66■■□□□ 1.7
SCN8A-204ENST00000546961 SLC10A3P09131 477 aa25.66■■□□□ 1.7
SCN8A-204ENST00000546961 ITGA6P23229 1130 aa25.66■■□□□ 1.7
SCN8A-204ENST00000546961 PRAMEF18Q5VWM3 479 aa25.66■■□□□ 1.7
SCN8A-204ENST00000546961 MPHOSPH8Q99549 860 aa25.66■■□□□ 1.7
SCN8A-204ENST00000546961 PLA2G12BQ9BX93 195 aa25.66■■□□□ 1.7
SCN8A-204ENST00000546961 STRIP1Q5VSL9 837 aa25.65■■□□□ 1.7
SCN8A-204ENST00000546961 DNAAF4Q8WXU2 420 aa25.65■■□□□ 1.7
SCN8A-204ENST00000546961 ANKRD2Q9GZV1 360 aa25.65■■□□□ 1.7
SCN8A-204ENST00000546961 MYH16Q9H6N6 1097 aa25.65■■□□□ 1.7
SCN8A-204ENST00000546961 SAGE1Q9NXZ1 904 aa25.65■■□□□ 1.7
SCN8A-204ENST00000546961 ZNF804BA4D1E1 1349 aa25.64■■□□□ 1.7
SCN8A-204ENST00000546961 PITPNM2Q9BZ72 1349 aa25.64■■□□□ 1.7
SCN8A-204ENST00000546961 CSF1RP07333 972 aa25.64■■□□□ 1.7
SCN8A-204ENST00000546961 FKBP1BP68106 108 aa25.64■■□□□ 1.7
SCN8A-204ENST00000546961 MOB2Q70IA6 237 aa25.64■■□□□ 1.7
SCN8A-204ENST00000546961 MRS2Q9HD23 443 aa25.64■■□□□ 1.7
SCN8A-204ENST00000546961 UBE2Q2LH0YL09 131 aa25.63■■□□□ 1.69
SCN8A-204ENST00000546961 VAMP4O75379 141 aa25.63■■□□□ 1.69
SCN8A-204ENST00000546961 CASP7P55210 303 aa25.63■■□□□ 1.69
SCN8A-204ENST00000546961 MLLT1Q03111 559 aaPredicted RBP25.63■■□□□ 1.69
SCN8A-204ENST00000546961 TTLL5Q6EMB2 1281 aa25.63■■□□□ 1.69
SCN8A-204ENST00000546961 LINS1Q8NG48 757 aa25.63■■□□□ 1.69
SCN8A-204ENST00000546961 RGS19P49795 217 aa25.62■■□□□ 1.69
SCN8A-204ENST00000546961 NCBP3Q53F19 620 aaKnown RBP25.62■■□□□ 1.69
SCN8A-204ENST00000546961 FANCIQ9NVI1 1328 aa25.62■■□□□ 1.69
SCN8A-204ENST00000546961 WNT10BO00744 389 aa25.61■■□□□ 1.69
SCN8A-204ENST00000546961 KLRK1P26718 216 aa25.61■■□□□ 1.69
SCN8A-204ENST00000546961 KCNJ4P48050 445 aa25.61■■□□□ 1.69
SCN8A-204ENST00000546961 TTLL12Q14166 644 aaPredicted RBP25.61■■□□□ 1.69
SCN8A-204ENST00000546961 RASAL3Q86YV0 1011 aa25.61■■□□□ 1.69
SCN8A-204ENST00000546961 MYO3BQ8WXR4 1341 aa25.61■■□□□ 1.69
SCN8A-204ENST00000546961 EXOSC9Q06265 439 aaKnown RBP25.6■■□□□ 1.69
SCN8A-204ENST00000546961 WDR63Q8IWG1 891 aa25.6■■□□□ 1.69
SCN8A-204ENST00000546961 REM2Q8IYK8 340 aaPredicted RBP25.6■■□□□ 1.69
SCN8A-204ENST00000546961 ANKRD18BA2A2Z9 1011 aa25.59■■□□□ 1.69
SCN8A-204ENST00000546961 GTF2IP78347 998 aa25.59■■□□□ 1.69
SCN8A-204ENST00000546961 CHRNDQ07001 517 aa25.59■■□□□ 1.69
SCN8A-204ENST00000546961 SASH1O94885 1247 aa25.58■■□□□ 1.69
SCN8A-204ENST00000546961 KIAA0825Q8IV33 1275 aa25.58■■□□□ 1.69
SCN8A-204ENST00000546961 F6X3S4 739 aa25.57■■□□□ 1.68
SCN8A-204ENST00000546961 HELBQ8NG08 1087 aaPredicted RBP25.57■■□□□ 1.68
SCN8A-204ENST00000546961 HDAC9Q9UKV0 1011 aa25.57■■□□□ 1.68
SCN8A-204ENST00000546961 CHMP3Q9Y3E7 222 aa25.57■■□□□ 1.68
SCN8A-204ENST00000546961 SNAP23O00161 211 aa25.56■■□□□ 1.68
SCN8A-204ENST00000546961 TAF5LO75529 589 aa25.56■■□□□ 1.68
SCN8A-204ENST00000546961 NF2P35240 595 aa25.56■■□□□ 1.68
SCN8A-204ENST00000546961 MMP14P50281 582 aa25.56■■□□□ 1.68
SCN8A-204ENST00000546961 CD209Q9NNX6 404 aa25.56■■□□□ 1.68
SCN8A-204ENST00000546961 ANP32CO43423 234 aa25.55■■□□□ 1.68
SCN8A-204ENST00000546961 FOXO4P98177 505 aa25.55■■□□□ 1.68
SCN8A-204ENST00000546961 IFIT5Q13325 482 aaKnown RBP25.55■■□□□ 1.68
SCN8A-204ENST00000546961 PSME4Q14997 1843 aa25.55■■□□□ 1.68
SCN8A-204ENST00000546961 MYH3P11055 1940 aa25.55■■□□□ 1.68
SCN8A-204ENST00000546961 PRKG1Q13976 671 aa25.54■■□□□ 1.68
SCN8A-204ENST00000546961 BEND3Q5T5X7 828 aa25.53■■□□□ 1.68
SCN8A-204ENST00000546961 SPEF2Q9C093 1822 aa25.53■■□□□ 1.68
SCN8A-204ENST00000546961 MKRN3Q13064 507 aaKnown RBP25.52■■□□□ 1.68
SCN8A-204ENST00000546961 SPINK5Q9NQ38 1064 aaPredicted RBP25.52■■□□□ 1.68
SCN8A-204ENST00000546961 PLIN1O60240 522 aa25.51■■□□□ 1.67
SCN8A-204ENST00000546961 TBC1D8O95759 1140 aa25.51■■□□□ 1.67
SCN8A-204ENST00000546961 PTPN12Q05209 780 aaKnown RBP25.51■■□□□ 1.67
SCN8A-204ENST00000546961 DLGAP5Q15398 846 aa25.51■■□□□ 1.67
SCN8A-204ENST00000546961 LMBR1LQ6UX01 489 aa25.51■■□□□ 1.67
SCN8A-204ENST00000546961 ARMC9Q7Z3E5 817 aa25.51■■□□□ 1.67
SCN8A-204ENST00000546961 APOBEC3FQ8IUX4 373 aaKnown RBP25.51■■□□□ 1.67
SCN8A-204ENST00000546961 ZBED3Q96IU2 234 aaPredicted RBP25.51■■□□□ 1.67
SCN8A-204ENST00000546961 CTU1Q7Z7A3 348 aaKnown RBP25.5■■□□□ 1.67
SCN8A-204ENST00000546961 PAPPA2Q9BXP8 1791 aa25.5■■□□□ 1.67
SCN8A-204ENST00000546961 AKAP11Q9UKA4 1901 aa25.5■■□□□ 1.67
SCN8A-204ENST00000546961 CCDC57Q2TAC2 916 aa25.49■■□□□ 1.67
SCN8A-204ENST00000546961 EPHA10Q5JZY3 1008 aa25.49■■□□□ 1.67
SCN8A-204ENST00000546961 C15orf52Q6ZUT6 534 aaKnown RBP25.49■■□□□ 1.67
SCN8A-204ENST00000546961 CERS5Q8N5B7 392 aa25.49■■□□□ 1.67
SCN8A-204ENST00000546961 ZNF594Q96JF6 807 aaPredicted RBP25.49■■□□□ 1.67
SCN8A-204ENST00000546961 F8W031 263 aaPredicted RBP25.48■■□□□ 1.67
SCN8A-204ENST00000546961 TM4SF4P48230 202 aa25.48■■□□□ 1.67
SCN8A-204ENST00000546961 TAF7LQ5H9L4 462 aa25.48■■□□□ 1.67
SCN8A-204ENST00000546961 ZNF804AQ7Z570 1209 aa25.48■■□□□ 1.67
SCN8A-204ENST00000546961 C9orf78Q9NZ63 289 aaPredicted RBP25.48■■□□□ 1.67
SCN8A-204ENST00000546961 IRS2Q9Y4H2 1338 aa25.47■■□□□ 1.67
SCN8A-204ENST00000546961 LDHAL6AQ6ZMR3 332 aa25.47■■□□□ 1.67
SCN8A-204ENST00000546961 DEFB129Q9H1M3 183 aa25.47■■□□□ 1.67
SCN8A-204ENST00000546961 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms