RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CNTROBQ8N137 903 aa19.93■□□□□ 0.78
DDX54-204ENST00000546898 AGBL3Q8NEM8 1001 aa19.93■□□□□ 0.78
DDX54-204ENST00000546898 IRS2Q9Y4H2 1338 aa19.93■□□□□ 0.78
DDX54-204ENST00000546898 TRIM27P14373 513 aa19.92■□□□□ 0.78
DDX54-204ENST00000546898 TXNRD3Q86VQ6 643 aa19.92■□□□□ 0.78
DDX54-204ENST00000546898 HELBQ8NG08 1087 aaPredicted RBP19.92■□□□□ 0.78
DDX54-204ENST00000546898 ZC3H15Q8WU90 426 aaKnown RBP19.92■□□□□ 0.78
DDX54-204ENST00000546898 FRAT1Q92837 279 aaPredicted RBP19.92■□□□□ 0.78
DDX54-204ENST00000546898 MROH5Q6ZUA9 1318 aa19.92■□□□□ 0.78
DDX54-204ENST00000546898 KLRK1P26718 216 aa19.91■□□□□ 0.78
DDX54-204ENST00000546898 ZKSCAN2Q63HK3 967 aa19.91■□□□□ 0.78
DDX54-204ENST00000546898 TRPM4Q8TD43 1214 aa19.91■□□□□ 0.78
DDX54-204ENST00000546898 CREBZFQ9NS37 354 aa19.91■□□□□ 0.78
DDX54-204ENST00000546898 PGAP2Q9UHJ9 254 aa19.91■□□□□ 0.78
DDX54-204ENST00000546898 MYO3BQ8WXR4 1341 aa19.91■□□□□ 0.78
DDX54-204ENST00000546898 SHTN1A0MZ66 631 aa19.9■□□□□ 0.78
DDX54-204ENST00000546898 HTRA3P83110 453 aa19.9■□□□□ 0.78
DDX54-204ENST00000546898 STRIP1Q5VSL9 837 aa19.9■□□□□ 0.78
DDX54-204ENST00000546898 ZNF804AQ7Z570 1209 aa19.9■□□□□ 0.78
DDX54-204ENST00000546898 DNAJC5GQ8N7S2 189 aa19.9■□□□□ 0.78
DDX54-204ENST00000546898 PUS3Q9BZE2 481 aaKnown RBP19.9■□□□□ 0.78
DDX54-204ENST00000546898 RIPOR2Q9Y4F9 1068 aa19.9■□□□□ 0.78
DDX54-204ENST00000546898 POLR2AP24928 1970 aaKnown RBP19.9■□□□□ 0.78
DDX54-204ENST00000546898 GNAI3P08754 354 aa19.89■□□□□ 0.77
DDX54-204ENST00000546898 HIRAP54198 1017 aaPredicted RBP19.89■□□□□ 0.77
DDX54-204ENST00000546898 UBE4AQ14139 1066 aa19.89■□□□□ 0.77
DDX54-204ENST00000546898 ARAP2Q8WZ64 1704 aa19.89■□□□□ 0.77
DDX54-204ENST00000546898 KLRG1Q96E93 195 aa19.89■□□□□ 0.77
DDX54-204ENST00000546898 GMLQ99445 158 aa19.89■□□□□ 0.77
DDX54-204ENST00000546898 MEIS3Q99687 375 aa19.89■□□□□ 0.77
DDX54-204ENST00000546898 SNAP23O00161 211 aa19.88■□□□□ 0.77
DDX54-204ENST00000546898 PLIN1O60240 522 aa19.88■□□□□ 0.77
DDX54-204ENST00000546898 ZNF280AP59817 542 aaPredicted RBP19.88■□□□□ 0.77
DDX54-204ENST00000546898 DACT2Q5SW24 774 aa19.88■□□□□ 0.77
DDX54-204ENST00000546898 CD209Q9NNX6 404 aa19.88■□□□□ 0.77
DDX54-204ENST00000546898 LRRFIP2Q9Y608 721 aaKnown RBP19.88■□□□□ 0.77
DDX54-204ENST00000546898 TMEM88BA6NKF7 163 aa19.87■□□□□ 0.77
DDX54-204ENST00000546898 RFX5P48382 616 aaPredicted RBP19.87■□□□□ 0.77
DDX54-204ENST00000546898 KIF4BQ2VIQ3 1234 aa19.87■□□□□ 0.77
DDX54-204ENST00000546898 TBC1D10BQ4KMP7 808 aaPredicted RBP19.87■□□□□ 0.77
DDX54-204ENST00000546898 SAMD7Q7Z3H4 446 aa19.87■□□□□ 0.77
DDX54-204ENST00000546898 FBXO3Q9UK99 471 aa19.87■□□□□ 0.77
DDX54-204ENST00000546898 MYH13Q9UKX3 1938 aa19.86■□□□□ 0.77
DDX54-204ENST00000546898 USP17L8P0C7I0 530 aa19.86■□□□□ 0.77
DDX54-204ENST00000546898 IL1R1P14778 569 aa19.86■□□□□ 0.77
DDX54-204ENST00000546898 MMP14P50281 582 aa19.86■□□□□ 0.77
DDX54-204ENST00000546898 LRRC24Q50LG9 513 aa19.86■□□□□ 0.77
DDX54-204ENST00000546898 METTL24Q5JXM2 366 aa19.86■□□□□ 0.77
DDX54-204ENST00000546898 FBXW7Q969H0 707 aa19.86■□□□□ 0.77
DDX54-204ENST00000546898 EYA2O00167 538 aa19.85■□□□□ 0.77
DDX54-204ENST00000546898 PTPN12Q05209 780 aaKnown RBP19.85■□□□□ 0.77
DDX54-204ENST00000546898 TTLL5Q6EMB2 1281 aa19.85■□□□□ 0.77
DDX54-204ENST00000546898 VGLL2Q8N8G2 317 aa19.85■□□□□ 0.77
DDX54-204ENST00000546898 KLHDC4Q8TBB5 520 aa19.85■□□□□ 0.77
DDX54-204ENST00000546898 CLUAP1Q96AJ1 413 aa19.85■□□□□ 0.77
DDX54-204ENST00000546898 TNNQ9UQP3 1299 aa19.85■□□□□ 0.77
DDX54-204ENST00000546898 ECM29Q5VYK3 1845 aa19.84■□□□□ 0.77
DDX54-204ENST00000546898 PDE8BO95263 885 aa19.84■□□□□ 0.77
DDX54-204ENST00000546898 EGFRP00533 1210 aa19.84■□□□□ 0.77
DDX54-204ENST00000546898 GTF2IP78347 998 aa19.84■□□□□ 0.77
DDX54-204ENST00000546898 CDC37L1Q7L3B6 337 aa19.84■□□□□ 0.77
DDX54-204ENST00000546898 MTX1Q13505 466 aa19.83■□□□□ 0.77
DDX54-204ENST00000546898 FTSJ3Q8IY81 847 aaKnown RBP19.83■□□□□ 0.77
DDX54-204ENST00000546898 OGFOD1Q8N543 542 aa19.83■□□□□ 0.77
DDX54-204ENST00000546898 TMEM57Q8N5G2 664 aa19.83■□□□□ 0.77
DDX54-204ENST00000546898 GLIS2Q9BZE0 524 aaPredicted RBP19.83■□□□□ 0.77
DDX54-204ENST00000546898 MYOZ2Q9NPC6 264 aa19.83■□□□□ 0.77
DDX54-204ENST00000546898 CIAO1O76071 339 aa19.82■□□□□ 0.76
DDX54-204ENST00000546898 FKBP1AP62942 108 aaKnown RBP19.82■□□□□ 0.76
DDX54-204ENST00000546898 RBM26Q5T8P6 1007 aaKnown RBP19.82■□□□□ 0.76
DDX54-204ENST00000546898 JMYQ8N9B5 988 aa19.82■□□□□ 0.76
DDX54-204ENST00000546898 CNTNAP1P78357 1384 aa19.82■□□□□ 0.76
DDX54-204ENST00000546898 TRAF5O00463 557 aa19.81■□□□□ 0.76
DDX54-204ENST00000546898 GNAI2P04899 355 aa19.81■□□□□ 0.76
DDX54-204ENST00000546898 HIBADHP31937 336 aaKnown RBP19.81■□□□□ 0.76
DDX54-204ENST00000546898 PUM3Q15397 648 aaKnown RBP19.81■□□□□ 0.76
DDX54-204ENST00000546898 DZIP1LQ8IYY4 767 aaKnown RBP19.81■□□□□ 0.76
DDX54-204ENST00000546898 DCPSQ96C86 337 aaKnown RBP19.81■□□□□ 0.76
DDX54-204ENST00000546898 FAM84BQ96KN1 310 aaPredicted RBP19.81■□□□□ 0.76
DDX54-204ENST00000546898 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
DDX54-204ENST00000546898 COPRSQ9NQ92 184 aa19.81■□□□□ 0.76
DDX54-204ENST00000546898 HDAC9Q9UKV0 1011 aa19.81■□□□□ 0.76
DDX54-204ENST00000546898 FAM205AQ6ZU69 1335 aa19.8■□□□□ 0.76
DDX54-204ENST00000546898 SASH1O94885 1247 aa19.8■□□□□ 0.76
DDX54-204ENST00000546898 GYG1P46976 350 aa19.8■□□□□ 0.76
DDX54-204ENST00000546898 ATG9AQ7Z3C6 839 aa19.8■□□□□ 0.76
DDX54-204ENST00000546898 TDRD7Q8NHU6 1098 aaKnown RBP19.8■□□□□ 0.76
DDX54-204ENST00000546898 GGA3Q9NZ52 723 aa19.8■□□□□ 0.76
DDX54-204ENST00000546898 PITPNM2Q9BZ72 1349 aa19.79■□□□□ 0.76
DDX54-204ENST00000546898 IFIT1P09914 478 aaKnown RBP19.79■□□□□ 0.76
DDX54-204ENST00000546898 FGFR2P21802 821 aa19.79■□□□□ 0.76
DDX54-204ENST00000546898 IL15P40933 162 aaPredicted RBP19.79■□□□□ 0.76
DDX54-204ENST00000546898 CAVIN4Q5BKX8 364 aa19.79■□□□□ 0.76
DDX54-204ENST00000546898 KIAA0825Q8IV33 1275 aa19.79■□□□□ 0.76
DDX54-204ENST00000546898 RASSF10A6NK89 507 aa19.78■□□□□ 0.76
DDX54-204ENST00000546898 SRGAP3O43295 1099 aa19.78■□□□□ 0.76
DDX54-204ENST00000546898 FMR1Q06787 632 aaKnown RBP eCLIP19.78■□□□□ 0.764e-6■□□□□ 10.6
DDX54-204ENST00000546898 SCARF1Q14162 830 aa19.78■□□□□ 0.76
DDX54-204ENST00000546898 KRT26Q7Z3Y9 468 aa19.78■□□□□ 0.76
DDX54-204ENST00000546898 FBXO33Q7Z6M2 555 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms