RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 MED23Q9ULK4 1368 aa14.7□□□□□ -0.06
RAB5C-203ENST00000546881 PSME4Q14997 1843 aa14.69□□□□□ -0.06
RAB5C-203ENST00000546881 SLC10A3P09131 477 aa14.69□□□□□ -0.06
RAB5C-203ENST00000546881 IGHMBP2P38935 993 aaKnown RBP14.69□□□□□ -0.06
RAB5C-203ENST00000546881 CCT4P50991 539 aaKnown RBP14.69□□□□□ -0.06
RAB5C-203ENST00000546881 GMLQ99445 158 aa14.69□□□□□ -0.06
RAB5C-203ENST00000546881 RNF186Q9NXI6 227 aa14.69□□□□□ -0.06
RAB5C-203ENST00000546881 MYH3P11055 1940 aa14.68□□□□□ -0.06
RAB5C-203ENST00000546881 ZNF609O15014 1411 aa14.68□□□□□ -0.06
RAB5C-203ENST00000546881 TTLL12Q14166 644 aaPredicted RBP14.68□□□□□ -0.06
RAB5C-203ENST00000546881 PRAMEF18Q5VWM3 479 aa14.68□□□□□ -0.06
RAB5C-203ENST00000546881 WWC1Q8IX03 1113 aa14.68□□□□□ -0.06
RAB5C-203ENST00000546881 OGFOD1Q8N543 542 aa14.68□□□□□ -0.06
RAB5C-203ENST00000546881 SAGE1Q9NXZ1 904 aa14.68□□□□□ -0.06
RAB5C-203ENST00000546881 FKBP5Q13451 457 aaPredicted RBP14.67□□□□□ -0.06
RAB5C-203ENST00000546881 NBPF9Q3BBW0 867 aa14.67□□□□□ -0.06
RAB5C-203ENST00000546881 MOB2Q70IA6 237 aa14.67□□□□□ -0.06
RAB5C-203ENST00000546881 RASAL3Q86YV0 1011 aa14.67□□□□□ -0.06
RAB5C-203ENST00000546881 CSRNP1Q96S65 589 aa14.67□□□□□ -0.06
RAB5C-203ENST00000546881 MPHOSPH8Q99549 860 aa14.67□□□□□ -0.06
RAB5C-203ENST00000546881 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
RAB5C-203ENST00000546881 PITPNM2Q9BZ72 1349 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 UBE2Q2LH0YL09 131 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 H7C1W4 665 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 ITGA6P23229 1130 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 KCNJ4P48050 445 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 FLIIQ13045 1269 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 GCKRQ14397 625 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 CCDC27Q2M243 656 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 DACT2Q5SW24 774 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 TXNRD3Q86VQ6 643 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 COA1Q9GZY4 146 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 MYH16Q9H6N6 1097 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 ZNF804BA4D1E1 1349 aa14.66□□□□□ -0.06
RAB5C-203ENST00000546881 PAPPA2Q9BXP8 1791 aa14.65□□□□□ -0.06
RAB5C-203ENST00000546881 SASH1O94885 1247 aa14.65□□□□□ -0.06
RAB5C-203ENST00000546881 KLRK1P26718 216 aa14.65□□□□□ -0.06
RAB5C-203ENST00000546881 FKBP1BP68106 108 aa14.65□□□□□ -0.06
RAB5C-203ENST00000546881 STRIP1Q5VSL9 837 aa14.65□□□□□ -0.06
RAB5C-203ENST00000546881 ANKRD2Q9GZV1 360 aa14.65□□□□□ -0.06
RAB5C-203ENST00000546881 LEMD3Q9Y2U8 911 aa14.65□□□□□ -0.06
RAB5C-203ENST00000546881 MYO3BQ8WXR4 1341 aa14.65□□□□□ -0.06
RAB5C-203ENST00000546881 AKAP11Q9UKA4 1901 aa14.64□□□□□ -0.07
RAB5C-203ENST00000546881 KIAA0825Q8IV33 1275 aa14.64□□□□□ -0.07
RAB5C-203ENST00000546881 DNAAF4Q8WXU2 420 aa14.64□□□□□ -0.07
RAB5C-203ENST00000546881 CHMP3Q9Y3E7 222 aa14.64□□□□□ -0.07
RAB5C-203ENST00000546881 IL16Q14005 1332 aa14.64□□□□□ -0.07
RAB5C-203ENST00000546881 FANCIQ9NVI1 1328 aa14.64□□□□□ -0.07
RAB5C-203ENST00000546881 WNT10BO00744 389 aa14.63□□□□□ -0.07
RAB5C-203ENST00000546881 NF2P35240 595 aa14.63□□□□□ -0.07
RAB5C-203ENST00000546881 RGS19P49795 217 aa14.63□□□□□ -0.07
RAB5C-203ENST00000546881 GTF2IP78347 998 aa14.63□□□□□ -0.07
RAB5C-203ENST00000546881 MKRN3Q13064 507 aaKnown RBP14.63□□□□□ -0.07
RAB5C-203ENST00000546881 PRKG1Q13976 671 aa14.63□□□□□ -0.07
RAB5C-203ENST00000546881 TTLL5Q6EMB2 1281 aa14.63□□□□□ -0.07
RAB5C-203ENST00000546881 MRS2Q9HD23 443 aa14.63□□□□□ -0.07
RAB5C-203ENST00000546881 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-203ENST00000546881 HDAC9Q9UKV0 1011 aa14.63□□□□□ -0.07
RAB5C-203ENST00000546881 ANKRD18BA2A2Z9 1011 aa14.62□□□□□ -0.07
RAB5C-203ENST00000546881 CHRNDQ07001 517 aa14.62□□□□□ -0.07
RAB5C-203ENST00000546881 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-203ENST00000546881 LINS1Q8NG48 757 aa14.62□□□□□ -0.07
RAB5C-203ENST00000546881 PLA2G12BQ9BX93 195 aa14.62□□□□□ -0.07
RAB5C-203ENST00000546881 TAF5LO75529 589 aa14.61□□□□□ -0.07
RAB5C-203ENST00000546881 CSF1RP07333 972 aa14.61□□□□□ -0.07
RAB5C-203ENST00000546881 CASP7P55210 303 aa14.61□□□□□ -0.07
RAB5C-203ENST00000546881 SOX10P56693 466 aa14.61□□□□□ -0.07
RAB5C-203ENST00000546881 EXOSC9Q06265 439 aaKnown RBP14.61□□□□□ -0.07
RAB5C-203ENST00000546881 HELBQ8NG08 1087 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-203ENST00000546881 ZNF646O15015 1829 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-203ENST00000546881 F6X3S4 739 aa14.6□□□□□ -0.07
RAB5C-203ENST00000546881 SNAP23O00161 211 aa14.6□□□□□ -0.07
RAB5C-203ENST00000546881 TBC1D8O95759 1140 aa14.6□□□□□ -0.07
RAB5C-203ENST00000546881 IFIT5Q13325 482 aaKnown RBP14.6□□□□□ -0.07
RAB5C-203ENST00000546881 CTU1Q7Z7A3 348 aaKnown RBP14.6□□□□□ -0.07
RAB5C-203ENST00000546881 APOBEC3FQ8IUX4 373 aaKnown RBP14.6□□□□□ -0.07
RAB5C-203ENST00000546881 F8W031 263 aaPredicted RBP14.59□□□□□ -0.07
RAB5C-203ENST00000546881 VAMP4O75379 141 aa14.59□□□□□ -0.07
RAB5C-203ENST00000546881 ARMC9Q7Z3E5 817 aa14.59□□□□□ -0.07
RAB5C-203ENST00000546881 CD209Q9NNX6 404 aa14.59□□□□□ -0.07
RAB5C-203ENST00000546881 PLIN1O60240 522 aa14.58□□□□□ -0.08
RAB5C-203ENST00000546881 PTPN12Q05209 780 aaKnown RBP14.58□□□□□ -0.08
RAB5C-203ENST00000546881 DLGAP5Q15398 846 aa14.58□□□□□ -0.08
RAB5C-203ENST00000546881 TAF7LQ5H9L4 462 aa14.58□□□□□ -0.08
RAB5C-203ENST00000546881 ANGEL1Q9UNK9 670 aaKnown RBP14.58□□□□□ -0.08
RAB5C-203ENST00000546881 FZD1Q9UP38 647 aa14.58□□□□□ -0.08
RAB5C-203ENST00000546881 JAG2Q9Y219 1238 aa14.58□□□□□ -0.08
RAB5C-203ENST00000546881 ANP32CO43423 234 aa14.57□□□□□ -0.08
RAB5C-203ENST00000546881 MMP14P50281 582 aa14.57□□□□□ -0.08
RAB5C-203ENST00000546881 FOXO4P98177 505 aa14.57□□□□□ -0.08
RAB5C-203ENST00000546881 ZNF804AQ7Z570 1209 aa14.57□□□□□ -0.08
RAB5C-203ENST00000546881 WDR63Q8IWG1 891 aa14.57□□□□□ -0.08
RAB5C-203ENST00000546881 ZNF296Q8WUU4 475 aaPredicted RBP14.57□□□□□ -0.08
RAB5C-203ENST00000546881 SREBF2Q12772 1141 aa14.56□□□□□ -0.08
RAB5C-203ENST00000546881 CCDC57Q2TAC2 916 aa14.56□□□□□ -0.08
RAB5C-203ENST00000546881 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
RAB5C-203ENST00000546881 BEND3Q5T5X7 828 aa14.56□□□□□ -0.08
RAB5C-203ENST00000546881 LMBR1LQ6UX01 489 aa14.56□□□□□ -0.08
RAB5C-203ENST00000546881 CERS5Q8N5B7 392 aa14.56□□□□□ -0.08
RAB5C-203ENST00000546881 ZNF594Q96JF6 807 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms