RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 PODNQ7Z5L7 613 aa17■□□□□ 0.31
PTCH1-213ENST00000546820 VPS37DQ86XT2 251 aa17■□□□□ 0.31
PTCH1-213ENST00000546820 GOLGB1Q14789 3259 aaKnown RBP16.99■□□□□ 0.31
PTCH1-213ENST00000546820 FZD9O00144 591 aa16.99■□□□□ 0.31
PTCH1-213ENST00000546820 SNAP23O00161 211 aa16.99■□□□□ 0.31
PTCH1-213ENST00000546820 YY1P25490 414 aa16.99■□□□□ 0.31
PTCH1-213ENST00000546820 TNIP1Q15025 636 aa16.99■□□□□ 0.31
PTCH1-213ENST00000546820 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
PTCH1-213ENST00000546820 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
PTCH1-213ENST00000546820 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
PTCH1-213ENST00000546820 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
PTCH1-213ENST00000546820 ECE2O60344 883 aa16.98■□□□□ 0.31
PTCH1-213ENST00000546820 SASH1O94885 1247 aa16.98■□□□□ 0.31
PTCH1-213ENST00000546820 FGFR2P21802 821 aa16.98■□□□□ 0.31
PTCH1-213ENST00000546820 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
PTCH1-213ENST00000546820 DBNDD1Q9H9R9 158 aa16.98■□□□□ 0.31
PTCH1-213ENST00000546820 LTBP1Q14766 1721 aa16.98■□□□□ 0.31
PTCH1-213ENST00000546820 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
PTCH1-213ENST00000546820 TXNRD3Q86VQ6 643 aa16.97■□□□□ 0.31
PTCH1-213ENST00000546820 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
PTCH1-213ENST00000546820 NEUROD6Q96NK8 337 aa16.97■□□□□ 0.31
PTCH1-213ENST00000546820 DCTPP1Q9H773 170 aa16.97■□□□□ 0.31
PTCH1-213ENST00000546820 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
PTCH1-213ENST00000546820 GLTPD2A6NH11 291 aa16.96■□□□□ 0.31
PTCH1-213ENST00000546820 TIMM10P62072 90 aa16.96■□□□□ 0.31
PTCH1-213ENST00000546820 HDAC1Q13547 482 aaPredicted RBP16.96■□□□□ 0.31
PTCH1-213ENST00000546820 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
PTCH1-213ENST00000546820 CIAPIN1Q6FI81 312 aa16.96■□□□□ 0.31
PTCH1-213ENST00000546820 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
PTCH1-213ENST00000546820 FAM84BQ96KN1 310 aaPredicted RBP16.96■□□□□ 0.31
PTCH1-213ENST00000546820 CD209Q9NNX6 404 aa16.96■□□□□ 0.31
PTCH1-213ENST00000546820 GNL3LQ9NVN8 582 aaKnown RBP16.96■□□□□ 0.31
PTCH1-213ENST00000546820 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
PTCH1-213ENST00000546820 APBB1O00213 710 aa16.95■□□□□ 0.3
PTCH1-213ENST00000546820 FRAT2O75474 233 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-213ENST00000546820 KLRK1P26718 216 aa16.95■□□□□ 0.3
PTCH1-213ENST00000546820 GYG1P46976 350 aa16.95■□□□□ 0.3
PTCH1-213ENST00000546820 CXCL9Q07325 125 aa16.95■□□□□ 0.3
PTCH1-213ENST00000546820 FBXO33Q7Z6M2 555 aa16.95■□□□□ 0.3
PTCH1-213ENST00000546820 GPC2Q8N158 579 aa16.95■□□□□ 0.3
PTCH1-213ENST00000546820 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
PTCH1-213ENST00000546820 ZBTB47Q9UFB7 747 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-213ENST00000546820 IRS2Q9Y4H2 1338 aa16.95■□□□□ 0.3
PTCH1-213ENST00000546820 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 RAD17O75943 681 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 IL1R1P14778 569 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 TNNI3KQ59H18 835 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 LRRCC1Q9C099 1032 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 GJA3Q9Y6H8 435 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 FPGT-TNNI3KV9GXZ4 949 aa16.94■□□□□ 0.3
PTCH1-213ENST00000546820 YDJCA8MPS7 323 aa16.93■□□□□ 0.3
PTCH1-213ENST00000546820 BCAMP50895 628 aa16.93■□□□□ 0.3
PTCH1-213ENST00000546820 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
PTCH1-213ENST00000546820 GCC1Q96CN9 775 aa16.93■□□□□ 0.3
PTCH1-213ENST00000546820 XAGE2Q96GT9 111 aa16.93■□□□□ 0.3
PTCH1-213ENST00000546820 DDNO94850 711 aaPredicted RBP16.92■□□□□ 0.3
PTCH1-213ENST00000546820 CCDC158Q5M9N0 1113 aa16.92■□□□□ 0.3
PTCH1-213ENST00000546820 STRIP1Q5VSL9 837 aa16.92■□□□□ 0.3
PTCH1-213ENST00000546820 TDRD7Q8NHU6 1098 aaKnown RBP16.92■□□□□ 0.3
PTCH1-213ENST00000546820 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
PTCH1-213ENST00000546820 ZNF541Q9H0D2 1346 aa16.92■□□□□ 0.3
PTCH1-213ENST00000546820 A0A1B0GUL6 1792 aa16.92■□□□□ 0.3
PTCH1-213ENST00000546820 PSMD14O00487 310 aa16.91■□□□□ 0.3
PTCH1-213ENST00000546820 VIL1P09327 827 aaKnown RBP16.91■□□□□ 0.3
PTCH1-213ENST00000546820 IFIT2P09913 472 aaKnown RBP16.91■□□□□ 0.3
PTCH1-213ENST00000546820 GTF2IP78347 998 aa16.91■□□□□ 0.3
PTCH1-213ENST00000546820 AACSQ86V21 672 aa16.91■□□□□ 0.3
PTCH1-213ENST00000546820 IL1RAPL2Q9NP60 686 aa16.91■□□□□ 0.3
PTCH1-213ENST00000546820 KCNQ5Q9NR82 932 aa16.91■□□□□ 0.3
PTCH1-213ENST00000546820 SEMA3EO15041 775 aa16.9■□□□□ 0.3
PTCH1-213ENST00000546820 RPS12P25398 132 aaKnown RBP16.9■□□□□ 0.3
PTCH1-213ENST00000546820 ADORA1P30542 326 aa16.9■□□□□ 0.3
PTCH1-213ENST00000546820 CCDC102BQ68D86 513 aa16.9■□□□□ 0.3
PTCH1-213ENST00000546820 EAF2Q96CJ1 260 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-213ENST00000546820 BCL11AQ9H165 835 aa16.9■□□□□ 0.3
PTCH1-213ENST00000546820 GPBP1L1Q9HC44 474 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-213ENST00000546820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-213ENST00000546820 COL4A5P29400 1685 aa16.9■□□□□ 0.3
PTCH1-213ENST00000546820 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
PTCH1-213ENST00000546820 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
PTCH1-213ENST00000546820 UQCRFS1P1P0C7P4 283 aa16.89■□□□□ 0.29
PTCH1-213ENST00000546820 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-213ENST00000546820 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-213ENST00000546820 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
PTCH1-213ENST00000546820 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-213ENST00000546820 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-213ENST00000546820 DENND2AQ9ULE3 1009 aa16.89■□□□□ 0.29
PTCH1-213ENST00000546820 UTRNP46939 3433 aa16.89■□□□□ 0.29
PTCH1-213ENST00000546820 MYO3BQ8WXR4 1341 aa16.89■□□□□ 0.29
PTCH1-213ENST00000546820 ZBTB22O15209 634 aa16.88■□□□□ 0.29
PTCH1-213ENST00000546820 IGHDP01880 384 aa16.88■□□□□ 0.29
PTCH1-213ENST00000546820 VEGFAP15692 232 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-213ENST00000546820 PHKA1P46020 1223 aa16.88■□□□□ 0.29
PTCH1-213ENST00000546820 FKBP1AP62942 108 aaKnown RBP16.88■□□□□ 0.29
PTCH1-213ENST00000546820 TTC39AQ5SRH9 613 aa16.88■□□□□ 0.29
PTCH1-213ENST00000546820 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
PTCH1-213ENST00000546820 TBC1D22AQ8WUA7 517 aa16.88■□□□□ 0.29
PTCH1-213ENST00000546820 DPF2Q92785 391 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms