RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 DZIP3Q86Y13 1208 aaKnown RBP9.41□□□□□ -0.9
CCDC60-205ENST00000546345 TRMT44Q8IYL2 757 aaKnown RBP9.41□□□□□ -0.9
CCDC60-205ENST00000546345 ABHD8Q96I13 439 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 MKRN1Q9UHC7 482 aaKnown RBP9.41□□□□□ -0.9
CCDC60-205ENST00000546345 CASP8AP2Q9UKL3 1982 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 TRPM7Q96QT4 1865 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 ALDH1A1P00352 501 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 FBLN1P23142 703 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 SIK1P57059 783 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 NBPF6Q5VWK0 638 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 PIGBQ92521 554 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 ZNF592Q92610 1267 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 SLC10A4Q96EP9 437 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 NBPF4Q96M43 638 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 CDK15Q96Q40 435 aa9.4□□□□□ -0.9
CCDC60-205ENST00000546345 CDV3Q9UKY7 258 aaKnown RBP9.4□□□□□ -0.9
CCDC60-205ENST00000546345 NRG2O14511 850 aaPredicted RBP9.39□□□□□ -0.91
CCDC60-205ENST00000546345 MCCD1P59942 119 aaPredicted RBP9.39□□□□□ -0.91
CCDC60-205ENST00000546345 VAC14Q08AM6 782 aa9.39□□□□□ -0.91
CCDC60-205ENST00000546345 VASH1Q7L8A9 365 aaPredicted RBP9.39□□□□□ -0.91
CCDC60-205ENST00000546345 PCDHB9Q9Y5E1 797 aa9.39□□□□□ -0.91
CCDC60-205ENST00000546345 TLL2Q9Y6L7 1015 aa9.39□□□□□ -0.91
CCDC60-205ENST00000546345 GYS1P13807 737 aa9.38□□□□□ -0.91
CCDC60-205ENST00000546345 RGS19P49795 217 aa9.38□□□□□ -0.91
CCDC60-205ENST00000546345 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
CCDC60-205ENST00000546345 SMARCC1Q92922 1105 aaPredicted RBP9.38□□□□□ -0.91
CCDC60-205ENST00000546345 ZMYND15Q9H091 742 aa9.38□□□□□ -0.91
CCDC60-205ENST00000546345 MAP4K5Q9Y4K4 846 aa9.38□□□□□ -0.91
CCDC60-205ENST00000546345 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
CCDC60-205ENST00000546345 SCN11AQ9UI33 1791 aa9.37□□□□□ -0.91
CCDC60-205ENST00000546345 SCN7AQ01118 1682 aa9.37□□□□□ -0.91
CCDC60-205ENST00000546345 GLTPD2A6NH11 291 aa9.37□□□□□ -0.91
CCDC60-205ENST00000546345 J3QL48 77 aa9.37□□□□□ -0.91
CCDC60-205ENST00000546345 VEGFAP15692 232 aaPredicted RBP9.37□□□□□ -0.91
CCDC60-205ENST00000546345 CHRNA5P30532 468 aa9.37□□□□□ -0.91
CCDC60-205ENST00000546345 CTCFP49711 727 aaPredicted RBP9.37□□□□□ -0.91
CCDC60-205ENST00000546345 DDR1Q08345 913 aa9.37□□□□□ -0.91
CCDC60-205ENST00000546345 SLC4A9Q96Q91 983 aa9.37□□□□□ -0.91
CCDC60-205ENST00000546345 CCDC87Q9NVE4 849 aa9.37□□□□□ -0.91
CCDC60-205ENST00000546345 SLX4Q8IY92 1834 aa9.36□□□□□ -0.91
CCDC60-205ENST00000546345 HSPA8P11142 646 aaKnown RBP9.36□□□□□ -0.91
CCDC60-205ENST00000546345 LBX1P52954 281 aa9.36□□□□□ -0.91
CCDC60-205ENST00000546345 MLLT1Q03111 559 aaPredicted RBP9.36□□□□□ -0.91
CCDC60-205ENST00000546345 DALRD3Q5D0E6 543 aaKnown RBP9.36□□□□□ -0.91
CCDC60-205ENST00000546345 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
CCDC60-205ENST00000546345 PIM2Q9P1W9 311 aa9.36□□□□□ -0.91
CCDC60-205ENST00000546345 ASAP1Q9ULH1 1129 aa9.36□□□□□ -0.91
CCDC60-205ENST00000546345 SMG6Q86US8 1419 aaKnown RBP9.36□□□□□ -0.91
CCDC60-205ENST00000546345 PASKQ96RG2 1323 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 FAM187AA6NFU0 413 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 ADH1CP00326 375 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 SMPD1P17405 629 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 TMF1P82094 1093 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 NBPF20Q3BBV1 942 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 RAPGEF4Q8WZA2 1011 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 KCTD15Q96SI1 283 aaPredicted RBP9.35□□□□□ -0.91
CCDC60-205ENST00000546345 SLC12A5Q9H2X9 1139 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 BCORQ6W2J9 1755 aa9.35□□□□□ -0.91
CCDC60-205ENST00000546345 NFKBIEO00221 500 aa9.34□□□□□ -0.91
CCDC60-205ENST00000546345 HMGB2P26583 209 aaKnown RBP9.34□□□□□ -0.91
CCDC60-205ENST00000546345 SOX11P35716 441 aa9.34□□□□□ -0.91
CCDC60-205ENST00000546345 GRM5P41594 1212 aa9.34□□□□□ -0.91
CCDC60-205ENST00000546345 VEGFBP49765 207 aa9.34□□□□□ -0.91
CCDC60-205ENST00000546345 NR5A1Q13285 461 aa9.34□□□□□ -0.91
CCDC60-205ENST00000546345 NLGN1Q8N2Q7 840 aa9.34□□□□□ -0.91
CCDC60-205ENST00000546345 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
CCDC60-205ENST00000546345 INSRP06213 1382 aa9.34□□□□□ -0.91
CCDC60-205ENST00000546345 CARMIL3Q8ND23 1372 aa9.34□□□□□ -0.91
CCDC60-205ENST00000546345 CNTNAP4Q9C0A0 1308 aa9.33□□□□□ -0.92
CCDC60-205ENST00000546345 UBR2Q8IWV8 1755 aa9.33□□□□□ -0.92
CCDC60-205ENST00000546345 DGAT1O75907 488 aa9.33□□□□□ -0.92
CCDC60-205ENST00000546345 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
CCDC60-205ENST00000546345 LMNB1P20700 586 aa9.33□□□□□ -0.92
CCDC60-205ENST00000546345 SEMA3FQ13275 785 aa9.33□□□□□ -0.92
CCDC60-205ENST00000546345 RRS1Q15050 365 aaKnown RBP9.33□□□□□ -0.92
CCDC60-205ENST00000546345 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
CCDC60-205ENST00000546345 ATG3Q9NT62 314 aa9.33□□□□□ -0.92
CCDC60-205ENST00000546345 TRAK2O60296 914 aa9.32□□□□□ -0.92
CCDC60-205ENST00000546345 CENPBP07199 599 aaPredicted RBP9.32□□□□□ -0.92
CCDC60-205ENST00000546345 AMPHP49418 695 aa9.32□□□□□ -0.92
CCDC60-205ENST00000546345 SRP68Q9UHB9 627 aaKnown RBP9.32□□□□□ -0.92
CCDC60-205ENST00000546345 RTCBQ9Y3I0 505 aaKnown RBP9.32□□□□□ -0.92
CCDC60-205ENST00000546345 PARP3Q9Y6F1 533 aa9.32□□□□□ -0.92
CCDC60-205ENST00000546345 USP42Q9H9J4 1324 aaKnown RBP9.31□□□□□ -0.92
CCDC60-205ENST00000546345 FSHRP23945 695 aa9.31□□□□□ -0.92
CCDC60-205ENST00000546345 NNTQ13423 1086 aa9.31□□□□□ -0.92
CCDC60-205ENST00000546345 HDGFL2Q7Z4V5 671 aaPredicted RBP9.31□□□□□ -0.92
CCDC60-205ENST00000546345 CEP126Q9P2H0 1117 aa9.31□□□□□ -0.92
CCDC60-205ENST00000546345 FLT4P35916 1363 aa9.31□□□□□ -0.92
CCDC60-205ENST00000546345 POM121CA8CG34 1229 aa9.3□□□□□ -0.92
CCDC60-205ENST00000546345 POLRMTO00411 1230 aaKnown RBP9.3□□□□□ -0.92
CCDC60-205ENST00000546345 HSP90AB2PQ58FF8 381 aa9.3□□□□□ -0.92
CCDC60-205ENST00000546345 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
CCDC60-205ENST00000546345 AIDAQ96BJ3 306 aa9.3□□□□□ -0.92
CCDC60-205ENST00000546345 TMOD3Q9NYL9 352 aa9.3□□□□□ -0.92
CCDC60-205ENST00000546345 CCDC85CA6NKD9 419 aa9.29□□□□□ -0.92
CCDC60-205ENST00000546345 ESPNB1AK53 854 aa9.29□□□□□ -0.92
CCDC60-205ENST00000546345 RPS6KA4O75676 772 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms