RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
SRP54-202ENST00000546080 BPIFA3Q9BQP9 254 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 CCT2P78371 535 aaKnown RBP16.53■□□□□ 0.24
SRP54-202ENST00000546080 ARHGAP29Q52LW3 1261 aa16.53■□□□□ 0.24
SRP54-202ENST00000546080 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
SRP54-202ENST00000546080 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
SRP54-202ENST00000546080 SEC62Q99442 399 aaKnown RBP16.53■□□□□ 0.24
SRP54-202ENST00000546080 ARGLU1Q9NWB6 273 aaPredicted RBP16.53■□□□□ 0.24
SRP54-202ENST00000546080 NAP1L2Q9ULW6 460 aaPredicted RBP16.53■□□□□ 0.24
SRP54-202ENST00000546080 PCDHA7Q9UN72 937 aa16.53■□□□□ 0.24
SRP54-202ENST00000546080 IRX5P78411 483 aaPredicted RBP16.53■□□□□ 0.24
SRP54-202ENST00000546080 DPCR1Q3MIW9 517 aa16.53■□□□□ 0.24
SRP54-202ENST00000546080 STOX1Q6ZVD7 989 aa16.53■□□□□ 0.24
SRP54-202ENST00000546080 DNAJC2Q99543 621 aaKnown RBP16.53■□□□□ 0.24
SRP54-202ENST00000546080 KIAA1468Q9P260 1216 aa16.53■□□□□ 0.24
SRP54-202ENST00000546080 A0A1B0GVL5 298 aa16.52■□□□□ 0.24
SRP54-202ENST00000546080 CCP110O43303 1012 aa16.52■□□□□ 0.24
SRP54-202ENST00000546080 PNMA6AP0CW24 399 aaPredicted RBP16.52■□□□□ 0.24
SRP54-202ENST00000546080 CYP2C19P33261 490 aa16.52■□□□□ 0.24
SRP54-202ENST00000546080 GORABQ5T7V8 394 aa16.52■□□□□ 0.24
SRP54-202ENST00000546080 ADALQ6DHV7 355 aa16.52■□□□□ 0.24
SRP54-202ENST00000546080 IP6K1Q92551 441 aa16.52■□□□□ 0.24
SRP54-202ENST00000546080 DBNLQ9UJU6 430 aaKnown RBP16.52■□□□□ 0.24
SRP54-202ENST00000546080 NDUFB9Q9Y6M9 179 aa16.52■□□□□ 0.24
SRP54-202ENST00000546080 ABCC6O95255 1503 aa16.52■□□□□ 0.23
SRP54-202ENST00000546080 LTN1O94822 1766 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
SRP54-202ENST00000546080 ILDR1Q86SU0 546 aaPredicted RBP16.51■□□□□ 0.23
SRP54-202ENST00000546080 A0A1W2PQ27 194 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 A0A1W2PQ64 194 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 A0A1W2PQD8 194 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
SRP54-202ENST00000546080 CHGBP05060 677 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 NDUFA8P51970 172 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 SF3A1Q15459 793 aaKnown RBP16.51■□□□□ 0.23
SRP54-202ENST00000546080 TNNI3KQ59H18 835 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 C1orf141Q5JVX7 400 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 RIC3Q7Z5B4 369 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 UBXN4Q92575 508 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 NCOA5Q9HCD5 579 aaKnown RBP16.51■□□□□ 0.23
SRP54-202ENST00000546080 RTEL1Q9NZ71 1219 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 FPGT-TNNI3KV9GXZ4 949 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 ANKARQ7Z5J8 1434 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 PHLPP2Q6ZVD8 1323 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 SALL1Q9NSC2 1324 aa16.51■□□□□ 0.23
SRP54-202ENST00000546080 IGKV5-2P06315 115 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 DNAI1Q9UI46 699 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 PLA2G4AP47712 749 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 ETF1P62495 437 aaKnown RBP16.5■□□□□ 0.23
SRP54-202ENST00000546080 NEXNQ0ZGT2 675 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 STK38Q15208 465 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 MNS1Q8NEH6 495 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
SRP54-202ENST00000546080 EID1Q9Y6B2 187 aa16.5■□□□□ 0.23
SRP54-202ENST00000546080 CARMIL3Q8ND23 1372 aa16.49■□□□□ 0.23
SRP54-202ENST00000546080 NLRP12P59046 1061 aa16.49■□□□□ 0.23
SRP54-202ENST00000546080 TEX35Q5T0J7 233 aa16.49■□□□□ 0.23
SRP54-202ENST00000546080 ORC3Q9UBD5 711 aaPredicted RBP16.49■□□□□ 0.23
SRP54-202ENST00000546080 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
SRP54-202ENST00000546080 BIN1O00499 593 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
SRP54-202ENST00000546080 TFCP2Q12800 502 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
SRP54-202ENST00000546080 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 HAUS7Q99871 368 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 AGXT2Q9BYV1 514 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 LAMA4Q16363 1823 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 SH3TC1Q8TE82 1336 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 ZRANB2O95218 330 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRP54-202ENST00000546080 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 EPHA10Q5JZY3 1008 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 LINC00301Q8NCQ3 95 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 KCNG4Q8TDN1 519 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 SRRTQ9BXP5 876 aaKnown RBP16.48■□□□□ 0.23
SRP54-202ENST00000546080 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
SRP54-202ENST00000546080 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
SRP54-202ENST00000546080 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
SRP54-202ENST00000546080 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.47■□□□□ 0.23
SRP54-202ENST00000546080 PDIA3P30101 505 aaKnown RBP16.47■□□□□ 0.23
SRP54-202ENST00000546080 FANCCQ00597 558 aa16.47■□□□□ 0.23
SRP54-202ENST00000546080 ZNF274Q96GC6 653 aaPredicted RBP16.47■□□□□ 0.23
SRP54-202ENST00000546080 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
SRP54-202ENST00000546080 CLIC4Q9Y696 253 aa16.47■□□□□ 0.23
SRP54-202ENST00000546080 OVOS2A0A0G2JMS6 1433 aa16.46■□□□□ 0.23
SRP54-202ENST00000546080 PXDNQ92626 1479 aa16.46■□□□□ 0.23
SRP54-202ENST00000546080 URI1O94763 535 aaPredicted RBP16.46■□□□□ 0.23
SRP54-202ENST00000546080 TPM1P09493 284 aa16.46■□□□□ 0.23
SRP54-202ENST00000546080 LMOD1P29536 600 aaPredicted RBP16.46■□□□□ 0.23
SRP54-202ENST00000546080 GCKRQ14397 625 aa16.46■□□□□ 0.23
SRP54-202ENST00000546080 NCAPHQ15003 741 aa16.46■□□□□ 0.23
SRP54-202ENST00000546080 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
SRP54-202ENST00000546080 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
SRP54-202ENST00000546080 DSCC1Q9BVC3 393 aa16.46■□□□□ 0.23
SRP54-202ENST00000546080 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
SRP54-202ENST00000546080 NEDD4P46934 1319 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms