RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 NUTM1Q86Y26 1132 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 TTC12Q9H892 705 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-208ENST00000545807 BABAM1Q9NWV8 329 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 ADCY9O60503 1353 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 COL18A1P39060 1754 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 NBPF26B4DH59 902 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 KCNQ2O43526 872 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 HMMRO75330 724 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 CD151P48509 253 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 NBPF14Q5TI25 921 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 RPAP2Q8IXW5 612 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-208ENST00000545807 NBPF15Q8N660 670 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 KLHL23Q8NBE8 558 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 STAG1Q8WVM7 1258 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 UBXN6Q9BZV1 441 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 HYPKQ9NX55 129 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 USP54Q70EL1 1684 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 DDX58O95786 925 aaKnown RBP7.81□□□□□ -1.16
NECAP1-208ENST00000545807 GPTP24298 496 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 UBE3BQ7Z3V4 1068 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 MIEF2Q96C03 454 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 GCC1Q96CN9 775 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 DCTPP1Q9H773 170 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 OVOS2A0A0G2JMS6 1433 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 HSPA1LP34931 641 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 NEXNQ0ZGT2 675 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 PTF1AQ7RTS3 328 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 PSD3Q9NYI0 1048 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 V9GYY5 206 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-208ENST00000545807 SGSM2O43147 1006 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 TTC19Q6DKK2 380 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-208ENST00000545807 FBXO38Q6PIJ6 1188 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 KIF2CQ99661 725 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 ZSCAN16Q9H4T2 348 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-208ENST00000545807 FHOD1Q9Y613 1164 aa7.81□□□□□ -1.16
NECAP1-208ENST00000545807 CAND2O75155 1236 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 CYP2E1P05181 493 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-208ENST00000545807 SCP2P22307 547 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 NAA30Q147X3 362 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-208ENST00000545807 TBC1D2BQ9UPU7 963 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 SMC2O95347 1197 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 IGKV5-2P06315 115 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 PLA2G4AP47712 749 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 TPM4P67936 248 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 NAIF1Q69YI7 327 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-208ENST00000545807 RILPL2Q969X0 211 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 SUCLG2Q96I99 432 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 A1CFQ9NQ94 594 aaKnown RBP7.8□□□□□ -1.16
NECAP1-208ENST00000545807 LTBP4Q8N2S1 1624 aa7.8□□□□□ -1.16
NECAP1-208ENST00000545807 A0A087WZG4 1122 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 ERVV-2B6SEH9 535 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 TPM1P09493 284 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 HOXB7P09629 217 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 ATP8B2P98198 1209 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 GPS2Q13227 327 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 PLEKHM2Q8IWE5 1019 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 MSL3Q8N5Y2 521 aaKnown RBP7.79□□□□□ -1.16
NECAP1-208ENST00000545807 MARCH10Q8NA82 808 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-208ENST00000545807 BICC1Q9H694 974 aaKnown RBP7.79□□□□□ -1.16
NECAP1-208ENST00000545807 SUDS3Q9H7L9 328 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-208ENST00000545807 TMEM63CQ9P1W3 806 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 NCAPD2Q15021 1401 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 ATP10DQ9P241 1426 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 SOS1Q07889 1333 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-208ENST00000545807 EP400Q96L91 3159 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 H2AFXP16104 143 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-208ENST00000545807 CORO7P57737 925 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 GRIK3Q13003 919 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 EPHA10Q5JZY3 1008 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 CERKQ8TCT0 537 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 SMARCE1Q969G3 411 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 PYCARDQ9ULZ3 195 aa7.79□□□□□ -1.16
NECAP1-208ENST00000545807 FAM208AQ9UK61 1670 aaKnown RBP7.79□□□□□ -1.16
NECAP1-208ENST00000545807 GRM8O00222 908 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 KINO60870 393 aaKnown RBP7.78□□□□□ -1.16
NECAP1-208ENST00000545807 TBC1D8BQ0IIM8 1120 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 TRAF1Q13077 416 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 DDX46Q7L014 1031 aaKnown RBP7.78□□□□□ -1.16
NECAP1-208ENST00000545807 SYNE4Q8N205 404 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 CCDC26Q8TAB7 109 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 PIK3R5Q8WYR1 880 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 KCNF1Q9H3M0 494 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 USP21Q9UK80 565 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 EIF3CLB5ME19 914 aaKnown RBP7.78□□□□□ -1.16
NECAP1-208ENST00000545807 RPS6KA5O75582 802 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 EIF3JO75822 258 aaKnown RBP7.78□□□□□ -1.16
NECAP1-208ENST00000545807 MAGEA8P43361 318 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 RNF20Q5VTR2 975 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 LINS1Q8NG48 757 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 EIF3CQ99613 913 aaKnown RBP7.78□□□□□ -1.16
NECAP1-208ENST00000545807 LRRCC1Q9C099 1032 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 IRAK4Q9NWZ3 460 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 HEG1Q9ULI3 1381 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 SPATA31A1Q5TZJ5 1347 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 SYCE3A1L190 88 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 IVLP07476 585 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 GSPT1P15170 499 aaKnown RBP7.78□□□□□ -1.16
NECAP1-208ENST00000545807 AP1ARQ63HQ0 302 aa7.78□□□□□ -1.16
NECAP1-208ENST00000545807 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms