RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 PPP1R12CQ9BZL4 782 aa6.25□□□□□ -1.41
LRP6-207ENST00000545658 AVENQ9NQS1 362 aaPredicted RBP6.25□□□□□ -1.41
LRP6-207ENST00000545658 USP21Q9UK80 565 aa6.25□□□□□ -1.41
LRP6-207ENST00000545658 GPC6Q9Y625 555 aaPredicted RBP6.25□□□□□ -1.41
LRP6-207ENST00000545658 PNPLA6Q8IY17 1366 aa6.25□□□□□ -1.41
LRP6-207ENST00000545658 CEP152O94986 1710 aa6.25□□□□□ -1.41
LRP6-207ENST00000545658 ASXL1Q8IXJ9 1541 aa6.25□□□□□ -1.41
LRP6-207ENST00000545658 ATRNO75882 1429 aa6.25□□□□□ -1.41
LRP6-207ENST00000545658 BLMP54132 1417 aaPredicted RBP6.25□□□□□ -1.41
LRP6-207ENST00000545658 KRBA1A5PL33 1030 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 GNB5O14775 395 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 C21orf2O43822 256 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 TSPY4P0CV99 314 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 TSPY10P0CW01 314 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 DGKGP49619 791 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 IDI1Q13907 227 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 C1orf53Q5VUE5 145 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 DEFB132Q7Z7B7 95 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 ZNF280CQ8ND82 737 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 CEP63Q96MT8 703 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 SLC30A3Q99726 388 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 SPOCK3Q9BQ16 436 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 HINFPQ9BQA5 517 aa6.24□□□□□ -1.41
LRP6-207ENST00000545658 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.24□□□□□ -1.41
LRP6-207ENST00000545658 EIF2AK4Q9P2K8 1649 aaKnown RBP6.24□□□□□ -1.41
LRP6-207ENST00000545658 CFAP65Q6ZU64 1925 aaKnown RBP6.23□□□□□ -1.41
LRP6-207ENST00000545658 PLEKHG1Q9ULL1 1385 aa6.23□□□□□ -1.41
LRP6-207ENST00000545658 PIK3R2O00459 728 aa6.23□□□□□ -1.41
LRP6-207ENST00000545658 LMOD1P29536 600 aaPredicted RBP6.23□□□□□ -1.41
LRP6-207ENST00000545658 HIRAP54198 1017 aaPredicted RBP6.23□□□□□ -1.41
LRP6-207ENST00000545658 DPYDQ12882 1025 aa6.23□□□□□ -1.41
LRP6-207ENST00000545658 CRTC2Q53ET0 693 aaPredicted RBP6.23□□□□□ -1.41
LRP6-207ENST00000545658 GAS2L2Q8NHY3 880 aa6.23□□□□□ -1.41
LRP6-207ENST00000545658 SUSD3Q96L08 255 aa6.23□□□□□ -1.41
LRP6-207ENST00000545658 ANKIB1Q9P2G1 1089 aa6.23□□□□□ -1.41
LRP6-207ENST00000545658 CHD2O14647 1828 aaKnown RBP6.22□□□□□ -1.41
LRP6-207ENST00000545658 BCL9LQ86UU0 1499 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 ADGRB3O60242 1522 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 PTK7Q13308 1070 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 KANK4Q5T7N3 995 aaPredicted RBP6.22□□□□□ -1.41
LRP6-207ENST00000545658 RAB44Q7Z6P3 723 aaPredicted RBP6.22□□□□□ -1.41
LRP6-207ENST00000545658 ALDH16A1Q8IZ83 802 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 C2orf49Q9BVC5 232 aaPredicted RBP6.22□□□□□ -1.41
LRP6-207ENST00000545658 VRTNQ9H8Y1 702 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 BRD7Q9NPI1 651 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 TBX22Q9Y458 520 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 DCCP43146 1447 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 CEP162Q5TB80 1403 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 ARHGEF5Q12774 1597 aa6.22□□□□□ -1.41
LRP6-207ENST00000545658 ELOA3CA0A087WX78 387 aaPredicted RBP6.21□□□□□ -1.42
LRP6-207ENST00000545658 ELOA3DA6NLF2 546 aaPredicted RBP6.21□□□□□ -1.42
LRP6-207ENST00000545658 ALAS2P22557 587 aa6.21□□□□□ -1.42
LRP6-207ENST00000545658 SPEM2Q0P670 501 aa6.21□□□□□ -1.42
LRP6-207ENST00000545658 SF3B2Q13435 895 aaKnown RBP6.21□□□□□ -1.42
LRP6-207ENST00000545658 ELOA3BQ3SY89 546 aa6.21□□□□□ -1.42
LRP6-207ENST00000545658 XP32Q5T750 250 aa6.21□□□□□ -1.42
LRP6-207ENST00000545658 ELOA3Q8NG57 546 aa6.21□□□□□ -1.42
LRP6-207ENST00000545658 DDX17Q92841 729 aaKnown RBP6.21□□□□□ -1.42
LRP6-207ENST00000545658 ZFYVE9O95405 1425 aa6.21□□□□□ -1.42
LRP6-207ENST00000545658 MST1RQ04912 1400 aa6.21□□□□□ -1.42
LRP6-207ENST00000545658 EHBP1L1Q8N3D4 1523 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 PTCH1Q13635 1447 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L15C9J2P7 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L10C9JJH3 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L13C9JLJ4 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L12C9JPN9 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L11C9JVI0 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L21D6R901 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L18D6R9N7 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L22D6RA61 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L17D6RBQ6 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L19D6RCP7 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L20D6RJB6 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 PPP1R15AO75807 674 aaPredicted RBP6.2□□□□□ -1.42
LRP6-207ENST00000545658 PROCP04070 461 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 USP17L24Q0WX57 530 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 ALYREFQ86V81 257 aaKnown RBP6.2□□□□□ -1.42
LRP6-207ENST00000545658 ANKMY2Q8IV38 441 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 NOP53Q9NZM5 478 aaKnown RBP6.2□□□□□ -1.42
LRP6-207ENST00000545658 KCNH4Q9UQ05 1017 aa6.2□□□□□ -1.42
LRP6-207ENST00000545658 PIK3R4Q99570 1358 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 NOS1P29475 1434 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 SIN3BO75182 1162 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 TYRO3Q06418 890 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 NEUROD1Q13562 356 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 CDCA8Q53HL2 280 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 STAG2Q8N3U4 1231 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 TRIM11Q96F44 468 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 PLVAPQ9BX97 442 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 DUOX2Q9NRD8 1548 aa6.19□□□□□ -1.42
LRP6-207ENST00000545658 UNC13BO14795 1591 aa6.18□□□□□ -1.42
LRP6-207ENST00000545658 ADAMTS13Q76LX8 1427 aa6.18□□□□□ -1.42
LRP6-207ENST00000545658 RIMS2Q9UQ26 1411 aa6.18□□□□□ -1.42
LRP6-207ENST00000545658 FAM196BA6NMK8 535 aa6.18□□□□□ -1.42
LRP6-207ENST00000545658 BTLAQ7Z6A9 289 aa6.18□□□□□ -1.42
LRP6-207ENST00000545658 BHMTQ93088 406 aa6.18□□□□□ -1.42
LRP6-207ENST00000545658 SLC52A1Q9NWF4 448 aa6.18□□□□□ -1.42
LRP6-207ENST00000545658 LMTK2Q8IWU2 1503 aa6.17□□□□□ -1.42
LRP6-207ENST00000545658 ADARB2-AS1A8MUL3 147 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms