RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 ITPK1Q13572 414 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 PARP10Q53GL7 1025 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 TSHZ3Q63HK5 1081 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 LMBR1LQ6UX01 489 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 AACSQ86V21 672 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 NUTM1Q86Y26 1132 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 GPR108Q9NPR9 543 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 ECHDC1Q9NTX5 307 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 HCSTQ9UBK5 93 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 ZNF652Q9Y2D9 606 aa6.65□□□□□ -1.34
NPIPB3-214ENST00000545358 DDX60Q8IY21 1712 aaKnown RBP6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 ARAP2Q8WZ64 1704 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 HIP1O00291 1037 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 KCNQ2O43526 872 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 CAMTA2O94983 1202 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 CSF1RP07333 972 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 HSP90B1P14625 803 aaKnown RBP6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 CHMLP26374 656 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 IL15P40933 162 aaPredicted RBP6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 MLLT3P42568 568 aaPredicted RBP6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 CTSWP56202 376 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 PRSS12P56730 875 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 HLFQ16534 295 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 PROX2Q3B8N5 592 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 TNNI3KQ59H18 835 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 RC3H1Q5TC82 1133 aaKnown RBP6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 HSCBQ8IWL3 235 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 ZNF34Q8IZ26 560 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 IL27Q8NEV9 243 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 SNX21Q969T3 373 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 RILPL2Q969X0 211 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 ESYT1Q9BSJ8 1104 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 BCL11AQ9H165 835 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 SIL1Q9H173 461 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 CHMP3Q9Y3E7 222 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 FPGT-TNNI3KV9GXZ4 949 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 UBN2Q6ZU65 1347 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 RAD50Q92878 1312 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 ABCC12Q96J65 1359 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 C4AP0C0L4 1744 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 C4BP0C0L5 1744 aa6.64□□□□□ -1.35
NPIPB3-214ENST00000545358 EYA2O00167 538 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 TULP1O00294 542 aaPredicted RBP6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 SEMA3EO15041 775 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 PDE8AO60658 829 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 MCCP23508 829 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 GPTP24298 496 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 RABEP1Q15276 862 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 CCDC57Q2TAC2 916 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 RIC1Q4ADV7 1423 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 CLEC4GQ6UXB4 293 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 TICAM2Q86XR7 235 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 LINC00116Q8NCU8 138 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 RTL9Q8NET4 1388 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 KLHDC4Q8TBB5 520 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 RUFY2Q8WXA3 655 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 JARID2Q92833 1246 aaPredicted RBP6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 EAF2Q96CJ1 260 aaPredicted RBP6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 EVI5LQ96CN4 794 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 IL17RAQ96F46 866 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 USP26Q9BXU7 913 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 KIAA1468Q9P260 1216 aa6.63□□□□□ -1.35
NPIPB3-214ENST00000545358 BRWD3Q6RI45 1802 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 SH3TC1Q8TE82 1336 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 TESPA1A2RU30 521 aaPredicted RBP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 IRS4O14654 1257 aaPredicted RBP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 ATP5JP18859 108 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 HMGB2P26583 209 aaKnown RBP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 ANAPC15P60006 121 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 TFCP2Q12800 502 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 IFIT5Q13325 482 aaKnown RBP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 TAF7LQ5H9L4 462 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 RTL5Q5HYW3 569 aaPredicted RBP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 ATG9AQ7Z3C6 839 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 FAM89AQ96GI7 184 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 ARXQ96QS3 562 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 KIF2CQ99661 725 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 ANP32EQ9BTT0 268 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 UTP14AQ9BVJ6 771 aaKnown RBP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 TBC1D2Q9BYX2 928 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 TLR7Q9NYK1 1049 aaKnown RBP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 TRMT112Q9UI30 125 aaKnown RBP6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 TBC1D2BQ9UPU7 963 aa6.62□□□□□ -1.35
NPIPB3-214ENST00000545358 ANKRD18BA2A2Z9 1011 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 SGSM2O43147 1006 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 RPS6KA4O75676 772 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 NTSR2O95665 410 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 ANKK1Q8NFD2 765 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 TTLL11Q8NHH1 800 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 WNT2BQ93097 391 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 KCTD12Q96CX2 325 aaKnown RBP6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 CCDC8Q9H0W5 538 aaPredicted RBP6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 SNRKQ9NRH2 765 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 DIAPH3Q9NSV4 1193 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 CEP126Q9P2H0 1117 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 DBNLQ9UJU6 430 aaKnown RBP6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 CCNL1Q9UK58 526 aaPredicted RBP6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 AKAP2Q9Y2D5 859 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms