RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 RSBN1LQ6PCB5 846 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-216ENST00000544989 PGAP2Q9UHJ9 254 aa14.81□□□□□ -0.04
HDAC4-216ENST00000544989 MROH5Q6ZUA9 1318 aa14.81□□□□□ -0.04
HDAC4-216ENST00000544989 SPEF2Q9C093 1822 aa14.8□□□□□ -0.04
HDAC4-216ENST00000544989 TMEM88BA6NKF7 163 aa14.8□□□□□ -0.04
HDAC4-216ENST00000544989 STRIP1Q5VSL9 837 aa14.8□□□□□ -0.04
HDAC4-216ENST00000544989 ZNF804AQ7Z570 1209 aa14.8□□□□□ -0.04
HDAC4-216ENST00000544989 KAZALD1Q96I82 304 aa14.8□□□□□ -0.04
HDAC4-216ENST00000544989 PRDM10Q9NQV6 1147 aa14.8□□□□□ -0.04
HDAC4-216ENST00000544989 ZBTB12Q9Y330 459 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-216ENST00000544989 GNAI3P08754 354 aa14.79□□□□□ -0.04
HDAC4-216ENST00000544989 UBE4AQ14139 1066 aa14.79□□□□□ -0.04
HDAC4-216ENST00000544989 INTS3Q68E01 1043 aaKnown RBP14.79□□□□□ -0.04
HDAC4-216ENST00000544989 ANKRD44Q8N8A2 993 aa14.79□□□□□ -0.04
HDAC4-216ENST00000544989 KCNQ5Q9NR82 932 aa14.79□□□□□ -0.04
HDAC4-216ENST00000544989 USP17L8P0C7I0 530 aa14.78□□□□□ -0.04
HDAC4-216ENST00000544989 ZNF280AP59817 542 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-216ENST00000544989 ATF7IPQ6VMQ6 1270 aa14.78□□□□□ -0.04
HDAC4-216ENST00000544989 OGFOD1Q8N543 542 aa14.78□□□□□ -0.04
HDAC4-216ENST00000544989 ZNF594Q96JF6 807 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-216ENST00000544989 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
HDAC4-216ENST00000544989 TAF5LO75529 589 aa14.77□□□□□ -0.05
HDAC4-216ENST00000544989 KIF4BQ2VIQ3 1234 aa14.77□□□□□ -0.05
HDAC4-216ENST00000544989 TTLL5Q6EMB2 1281 aa14.77□□□□□ -0.05
HDAC4-216ENST00000544989 CDC37L1Q7L3B6 337 aa14.77□□□□□ -0.05
HDAC4-216ENST00000544989 TRPM4Q8TD43 1214 aa14.77□□□□□ -0.05
HDAC4-216ENST00000544989 GMLQ99445 158 aa14.77□□□□□ -0.05
HDAC4-216ENST00000544989 PCDH10Q9P2E7 1040 aa14.77□□□□□ -0.05
HDAC4-216ENST00000544989 RIPOR2Q9Y4F9 1068 aa14.77□□□□□ -0.05
HDAC4-216ENST00000544989 SCN9AQ15858 1988 aa14.76□□□□□ -0.05
HDAC4-216ENST00000544989 PSME4Q14997 1843 aa14.76□□□□□ -0.05
HDAC4-216ENST00000544989 DACT2Q5SW24 774 aa14.76□□□□□ -0.05
HDAC4-216ENST00000544989 ZKSCAN2Q63HK3 967 aa14.76□□□□□ -0.05
HDAC4-216ENST00000544989 TXNRD3Q86VQ6 643 aa14.76□□□□□ -0.05
HDAC4-216ENST00000544989 HELBQ8NG08 1087 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-216ENST00000544989 FRAT1Q92837 279 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-216ENST00000544989 DCPSQ96C86 337 aaKnown RBP14.76□□□□□ -0.05
HDAC4-216ENST00000544989 CD209Q9NNX6 404 aa14.76□□□□□ -0.05
HDAC4-216ENST00000544989 HDAC9Q9UKV0 1011 aa14.76□□□□□ -0.05
HDAC4-216ENST00000544989 WTIPA6NIX2 430 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-216ENST00000544989 PLIN1O60240 522 aa14.75□□□□□ -0.05
HDAC4-216ENST00000544989 TRIM27P14373 513 aa14.75□□□□□ -0.05
HDAC4-216ENST00000544989 IL1R1P14778 569 aa14.75□□□□□ -0.05
HDAC4-216ENST00000544989 HIRAP54198 1017 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-216ENST00000544989 FKBP1AP62942 108 aaKnown RBP14.75□□□□□ -0.05
HDAC4-216ENST00000544989 TBC1D10BQ4KMP7 808 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-216ENST00000544989 METTL24Q5JXM2 366 aa14.75□□□□□ -0.05
HDAC4-216ENST00000544989 SAMD7Q7Z3H4 446 aa14.75□□□□□ -0.05
HDAC4-216ENST00000544989 FBXW7Q969H0 707 aa14.75□□□□□ -0.05
HDAC4-216ENST00000544989 IRS2Q9Y4H2 1338 aa14.74□□□□□ -0.05
HDAC4-216ENST00000544989 BCAR3O75815 825 aa14.74□□□□□ -0.05
HDAC4-216ENST00000544989 MYOZ2Q9NPC6 264 aa14.74□□□□□ -0.05
HDAC4-216ENST00000544989 TNRC18O15417 2968 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-216ENST00000544989 CNTNAP1P78357 1384 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 FOXN1O15353 648 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 CIAO1O76071 339 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 PDE8BO95263 885 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 KLRK1P26718 216 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 HIBADHP31937 336 aaKnown RBP14.73□□□□□ -0.05
HDAC4-216ENST00000544989 GTF2IP78347 998 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 CAVIN4Q5BKX8 364 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 RBM26Q5T8P6 1007 aaKnown RBP14.73□□□□□ -0.05
HDAC4-216ENST00000544989 KRT26Q7Z3Y9 468 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 VPS37DQ86XT2 251 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 SULF1Q8IWU6 871 aa14.73□□□□□ -0.05
HDAC4-216ENST00000544989 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
HDAC4-216ENST00000544989 PUS3Q9BZE2 481 aaKnown RBP14.73□□□□□ -0.05
HDAC4-216ENST00000544989 PITPNM2Q9BZ72 1349 aa14.72□□□□□ -0.05
HDAC4-216ENST00000544989 SHTN1A0MZ66 631 aa14.72□□□□□ -0.05
HDAC4-216ENST00000544989 RASSF10A6NK89 507 aa14.72□□□□□ -0.05
HDAC4-216ENST00000544989 EYA2O00167 538 aa14.72□□□□□ -0.05
HDAC4-216ENST00000544989 SASH1O94885 1247 aa14.72□□□□□ -0.05
HDAC4-216ENST00000544989 IFIT1P09914 478 aaKnown RBP14.72□□□□□ -0.05
HDAC4-216ENST00000544989 MS4A1P11836 297 aa14.72□□□□□ -0.05
HDAC4-216ENST00000544989 PUM3Q15397 648 aaKnown RBP14.72□□□□□ -0.05
HDAC4-216ENST00000544989 MEIS3Q99687 375 aa14.72□□□□□ -0.05
HDAC4-216ENST00000544989 ABT1Q9ULW3 272 aaKnown RBP14.72□□□□□ -0.05
HDAC4-216ENST00000544989 LRRFIP2Q9Y608 721 aaKnown RBP14.72□□□□□ -0.05
HDAC4-216ENST00000544989 A0A1B0GUL6 1792 aa14.71□□□□□ -0.05
HDAC4-216ENST00000544989 CELF2O95319 508 aaKnown RBP14.71□□□□□ -0.05
HDAC4-216ENST00000544989 GNAI2P04899 355 aa14.71□□□□□ -0.05
HDAC4-216ENST00000544989 RFX5P48382 616 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-216ENST00000544989 PTPN12Q05209 780 aaKnown RBP14.71□□□□□ -0.05
HDAC4-216ENST00000544989 SCARF1Q14162 830 aa14.71□□□□□ -0.05
HDAC4-216ENST00000544989 DEFB115Q30KQ5 88 aa14.71□□□□□ -0.05
HDAC4-216ENST00000544989 LRRC24Q50LG9 513 aa14.71□□□□□ -0.05
HDAC4-216ENST00000544989 HHIPL1Q96JK4 782 aa14.71□□□□□ -0.05
HDAC4-216ENST00000544989 GLIS2Q9BZE0 524 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-216ENST00000544989 TRPM7Q96QT4 1865 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 SNAP23O00161 211 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 TRAF5O00463 557 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 SLC5A1P13866 664 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 IL15P40933 162 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-216ENST00000544989 ECE1P42892 770 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 MTX1Q13505 466 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 USP48Q86UV5 1035 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 VGLL2Q8N8G2 317 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 TDRD7Q8NHU6 1098 aaKnown RBP14.7□□□□□ -0.06
HDAC4-216ENST00000544989 LPIN2Q92539 896 aa14.7□□□□□ -0.06
HDAC4-216ENST00000544989 FAM84BQ96KN1 310 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms