RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 DCAF8Q5TAQ9 597 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 ZNF804AQ7Z570 1209 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 PODNQ7Z5L7 613 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 NIM1KQ8IY84 436 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 COA1Q9GZY4 146 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 EXOC6BQ9Y2D4 811 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 ZBTB22O15209 634 aa14.48□□□□□ -0.09
SNHG1-221ENST00000544983 AOC3Q16853 763 aa14.48□□□□□ -0.09
SNHG1-221ENST00000544983 C9orf131Q5VYM1 1079 aa14.48□□□□□ -0.09
SNHG1-221ENST00000544983 CLASRPQ8N2M8 674 aaKnown RBP14.48□□□□□ -0.09
SNHG1-221ENST00000544983 RHPN1Q8TCX5 695 aa14.48□□□□□ -0.09
SNHG1-221ENST00000544983 RNF181Q9P0P0 153 aa14.48□□□□□ -0.09
SNHG1-221ENST00000544983 ZNRF3Q9ULT6 936 aa14.48□□□□□ -0.09
SNHG1-221ENST00000544983 CHD4Q14839 1912 aa14.48□□□□□ -0.09
SNHG1-221ENST00000544983 DICER1Q9UPY3 1922 aaKnown RBP14.48□□□□□ -0.09
SNHG1-221ENST00000544983 A0A1B0GUL6 1792 aa14.47□□□□□ -0.09
SNHG1-221ENST00000544983 SLC51AQ86UW1 340 aa14.47□□□□□ -0.09
SNHG1-221ENST00000544983 VPS37DQ86XT2 251 aa14.47□□□□□ -0.09
SNHG1-221ENST00000544983 LRRCC1Q9C099 1032 aa14.47□□□□□ -0.09
SNHG1-221ENST00000544983 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
SNHG1-221ENST00000544983 IRS2Q9Y4H2 1338 aa14.46□□□□□ -0.09
SNHG1-221ENST00000544983 A0A1B0GUL7 405 aa14.46□□□□□ -0.09
SNHG1-221ENST00000544983 HIBADHP31937 336 aaKnown RBP14.46□□□□□ -0.09
SNHG1-221ENST00000544983 TNNI3KQ59H18 835 aa14.46□□□□□ -0.09
SNHG1-221ENST00000544983 GNL3LQ9NVN8 582 aaKnown RBP14.46□□□□□ -0.09
SNHG1-221ENST00000544983 FPGT-TNNI3KV9GXZ4 949 aa14.46□□□□□ -0.09
SNHG1-221ENST00000544983 FZD9O00144 591 aa14.45□□□□□ -0.1
SNHG1-221ENST00000544983 RIMBP2O15034 1052 aa14.45□□□□□ -0.1
SNHG1-221ENST00000544983 PRELPP51888 382 aa14.45□□□□□ -0.1
SNHG1-221ENST00000544983 EIF6P56537 245 aaKnown RBP14.45□□□□□ -0.1
SNHG1-221ENST00000544983 CCDC88AQ3V6T2 1871 aa14.45□□□□□ -0.1
SNHG1-221ENST00000544983 DPY19L2Q6NUT2 758 aa14.45□□□□□ -0.1
SNHG1-221ENST00000544983 FBXO33Q7Z6M2 555 aa14.45□□□□□ -0.1
SNHG1-221ENST00000544983 SMC5Q8IY18 1101 aa14.45□□□□□ -0.1
SNHG1-221ENST00000544983 FAM84BQ96KN1 310 aaPredicted RBP14.45□□□□□ -0.1
SNHG1-221ENST00000544983 ZNF609O15014 1411 aa14.44□□□□□ -0.1
SNHG1-221ENST00000544983 SNAP23O00161 211 aa14.44□□□□□ -0.1
SNHG1-221ENST00000544983 SEMA3EO15041 775 aa14.44□□□□□ -0.1
SNHG1-221ENST00000544983 ECE2O60344 883 aa14.44□□□□□ -0.1
SNHG1-221ENST00000544983 IL1R1P14778 569 aa14.44□□□□□ -0.1
SNHG1-221ENST00000544983 TNIP1Q15025 636 aa14.44□□□□□ -0.1
SNHG1-221ENST00000544983 GORABQ5T7V8 394 aa14.44□□□□□ -0.1
SNHG1-221ENST00000544983 NEUROD6Q96NK8 337 aa14.44□□□□□ -0.1
SNHG1-221ENST00000544983 WTIPA6NIX2 430 aaPredicted RBP14.43□□□□□ -0.1
SNHG1-221ENST00000544983 TIMM10P62072 90 aa14.43□□□□□ -0.1
SNHG1-221ENST00000544983 TXNRD3Q86VQ6 643 aa14.43□□□□□ -0.1
SNHG1-221ENST00000544983 TDRD7Q8NHU6 1098 aaKnown RBP14.43□□□□□ -0.1
SNHG1-221ENST00000544983 XAGE2Q96GT9 111 aa14.43□□□□□ -0.1
SNHG1-221ENST00000544983 GPR101Q96P66 508 aaPredicted RBP14.43□□□□□ -0.1
SNHG1-221ENST00000544983 CD209Q9NNX6 404 aa14.43□□□□□ -0.1
SNHG1-221ENST00000544983 APBB1O00213 710 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 IGHDP01880 384 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 IFIT2P09913 472 aaKnown RBP14.42□□□□□ -0.1
SNHG1-221ENST00000544983 UQCRFS1P1P0C7P4 283 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 KLRK1P26718 216 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 GYG1P46976 350 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 MMP14P50281 582 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 DOK7Q18PE1 504 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 CCDC158Q5M9N0 1113 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 AACSQ86V21 672 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 EAF2Q96CJ1 260 aaPredicted RBP14.42□□□□□ -0.1
SNHG1-221ENST00000544983 ZNF512BQ96KM6 892 aaPredicted RBP14.42□□□□□ -0.1
SNHG1-221ENST00000544983 DBNDD1Q9H9R9 158 aa14.42□□□□□ -0.1
SNHG1-221ENST00000544983 ARAP2Q8WZ64 1704 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 USP17L3A6NCW0 530 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 USP17L4A6NCW7 530 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 FRAT2O75474 233 aaPredicted RBP14.41□□□□□ -0.1
SNHG1-221ENST00000544983 BCAMP50895 628 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 FKBP1AP62942 108 aaKnown RBP14.41□□□□□ -0.1
SNHG1-221ENST00000544983 STRIP1Q5VSL9 837 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 CCDC102BQ68D86 513 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 CIAPIN1Q6FI81 312 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 USP17L1Q7RTZ2 530 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 GPC2Q8N158 579 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 IL1RAPL2Q9NP60 686 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 PDS5AQ29RF7 1337 aaKnown RBP14.41□□□□□ -0.1
SNHG1-221ENST00000544983 FAM205AQ6ZU69 1335 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 MYO3BQ8WXR4 1341 aa14.41□□□□□ -0.1
SNHG1-221ENST00000544983 GLTPD2A6NH11 291 aa14.4□□□□□ -0.1
SNHG1-221ENST00000544983 VIL1P09327 827 aaKnown RBP14.4□□□□□ -0.1
SNHG1-221ENST00000544983 RPS12P25398 132 aaKnown RBP14.4□□□□□ -0.1
SNHG1-221ENST00000544983 CXCL9Q07325 125 aa14.4□□□□□ -0.1
SNHG1-221ENST00000544983 ANKRD45Q5TZF3 282 aa14.4□□□□□ -0.1
SNHG1-221ENST00000544983 TTLL5Q6EMB2 1281 aa14.4□□□□□ -0.1
SNHG1-221ENST00000544983 TBC1D22AQ8WUA7 517 aa14.4□□□□□ -0.1
SNHG1-221ENST00000544983 DENND2AQ9ULE3 1009 aa14.4□□□□□ -0.1
SNHG1-221ENST00000544983 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.4□□□□□ -0.1
SNHG1-221ENST00000544983 KDM2BQ8NHM5 1336 aa14.4□□□□□ -0.1
SNHG1-221ENST00000544983 COL4A5P29400 1685 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 TIAM2Q8IVF5 1701 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 YDJCA8MPS7 323 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 IGSF3O75054 1194 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 ARID4AP29374 1257 aaPredicted RBP14.39□□□□□ -0.11
SNHG1-221ENST00000544983 ADORA1P30542 326 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 PHKA1P46020 1223 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 NUCB1Q02818 461 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 CENPQQ7L2Z9 268 aaPredicted RBP14.39□□□□□ -0.11
SNHG1-221ENST00000544983 WDR66Q8TBY9 1149 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms