RNA–Protein interactions for RNA: ENST00000544805.1

RNF10-222, Transcript of ring finger protein 10, human

TSL 2

Gene RNF10, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-222	ENST00000544805	SYT17	Q9BSW7	474 aa		10.85	□□□□□ -0.67
RNF10-222	ENST00000544805	RIPK4	P57078	832 aa		10.84	□□□□□ -0.67
RNF10-222	ENST00000544805	TAF7	Q15545	349 aa	Predicted RBP	10.84	□□□□□ -0.67
RNF10-222	ENST00000544805	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.84	□□□□□ -0.67
RNF10-222	ENST00000544805	TYW1B	Q6NUM6	668 aa		10.84	□□□□□ -0.67
RNF10-222	ENST00000544805	ZNF454	Q8N9F8	522 aa		10.84	□□□□□ -0.67
RNF10-222	ENST00000544805	TMX4	Q9H1E5	349 aa	Predicted RBP	10.84	□□□□□ -0.67
RNF10-222	ENST00000544805	TPX2	Q9ULW0	747 aa	Known RBP	10.84	□□□□□ -0.67
RNF10-222	ENST00000544805	SCN11A	Q9UI33	1791 aa		10.84	□□□□□ -0.67
RNF10-222	ENST00000544805	CCDC194	A0A1B0GVG4	234 aa		10.83	□□□□□ -0.68
RNF10-222	ENST00000544805	PSMC1	P62191	440 aa	Known RBP	10.83	□□□□□ -0.68
RNF10-222	ENST00000544805	ATL2	Q8NHH9	583 aa		10.83	□□□□□ -0.68
RNF10-222	ENST00000544805	SPOCK3	Q9BQ16	436 aa		10.83	□□□□□ -0.68
RNF10-222	ENST00000544805	IRF2BPL	Q9H1B7	796 aa		10.83	□□□□□ -0.68
RNF10-222	ENST00000544805	SWAP70	Q9UH65	585 aa		10.83	□□□□□ -0.68
RNF10-222	ENST00000544805	PARP3	Q9Y6F1	533 aa		10.83	□□□□□ -0.68
RNF10-222	ENST00000544805		A0A087WZG4	1122 aa		10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	NPHP1	O15259	732 aa		10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	ZMYND10	O75800	440 aa		10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	MMP10	P09238	476 aa		10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	CYP19A1	P11511	503 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	RUNDC1	Q96C34	613 aa		10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	ZNF496	Q96IT1	587 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	MIS18A	Q9NYP9	233 aa		10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	SMC3	Q9UQE7	1217 aa		10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	RRP7A	Q9Y3A4	280 aa	Known RBP	10.82	□□□□□ -0.68
RNF10-222	ENST00000544805	HEG1	Q9ULI3	1381 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	RBM47	A0AV96	593 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	GPR37	O15354	613 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	CBFA2T2	O43439	604 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	ST18	O60284	1047 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	SNRPA1	P09661	255 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	POU5F1	Q01860	360 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	HSP90B2P	Q58FF3	399 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	INTS5	Q6P9B9	1019 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	AMIGO3	Q86WK7	504 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	ZDHHC16	Q969W1	377 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	PLEKHF1	Q96S99	279 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	THUMPD2	Q9BTF0	503 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	SRP68	Q9UHB9	627 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	ADAMTS8	Q9UP79	889 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	CEP83	Q9Y592	693 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	TAF1L	Q8IZX4	1826 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	QSER1	Q2KHR3	1735 aa		10.81	□□□□□ -0.68
RNF10-222	ENST00000544805	MAP3K7	O43318	606 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	KCNQ3	O43525	872 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	TMPO	P42166	694 aa	Known RBP	10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	NEXN	Q0ZGT2	675 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	C4orf46	Q504U0	113 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	USPL1	Q5W0Q7	1092 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	RNF217	Q8TC41	542 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	CLUAP1	Q96AJ1	413 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	MRS2	Q9HD23	443 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	GNL3L	Q9NVN8	582 aa	Known RBP	10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	TSPYL4	Q9UJ04	414 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	MRC1	P22897	1456 aa		10.8	□□□□□ -0.68
RNF10-222	ENST00000544805	TUBGCP6	Q96RT7	1819 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	CEMIP	Q8WUJ3	1361 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	BICDL2	A1A5D9	508 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	WDHD1	O75717	1129 aa	Predicted RBP	10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	BDNF	P23560	247 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	ZNF662	Q6ZS27	426 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	PMM1	Q92871	262 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	WWC3	Q9ULE0	1092 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	ZBTB1	Q9Y2K1	713 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	CD2AP	Q9Y5K6	639 aa		10.79	□□□□□ -0.68
RNF10-222	ENST00000544805	IPO8	O15397	1037 aa	Known RBP	10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	A1BG	P04217	495 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	GYS1	P13807	737 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	YY1	P25490	414 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	CD151	P48509	253 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	BICDL1	Q6ZP65	573 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	NGEF	Q8N5V2	710 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	NLGN2	Q8NFZ4	835 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	EFCC1	Q9HA90	598 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	CDHR5	Q9HBB8	845 aa		10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	FBXO9	Q9UK97	447 aa	Predicted RBP	10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	USP42	Q9H9J4	1324 aa	Known RBP	10.78	□□□□□ -0.68
RNF10-222	ENST00000544805	COL15A1	P39059	1388 aa		10.77	□□□□□ -0.68
RNF10-222	ENST00000544805	COQ9	O75208	318 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	VDR	P11473	427 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	GYS2	P54840	703 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	ICE2	Q659A1	982 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	CCDC94	Q9BW85	323 aa	Predicted RBP	10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	ADAM33	Q9BZ11	813 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	NARF	Q9UHQ1	456 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	TBC1D2B	Q9UPU7	963 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	USP16	Q9Y5T5	823 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	KCP	Q6ZWJ8	1503 aa		10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	SOS1	Q07889	1333 aa	Predicted RBP	10.77	□□□□□ -0.69
RNF10-222	ENST00000544805	UBR3	Q6ZT12	1888 aa		10.76	□□□□□ -0.69
RNF10-222	ENST00000544805	ZNF831	Q5JPB2	1677 aa		10.76	□□□□□ -0.69
RNF10-222	ENST00000544805	PPP1R12A	O14974	1030 aa	Predicted RBP	10.76	□□□□□ -0.69
RNF10-222	ENST00000544805	GRIN3B	O60391	1043 aa		10.76	□□□□□ -0.69
RNF10-222	ENST00000544805	IL6ST	P40189	918 aa	Predicted RBP	10.76	□□□□□ -0.69
RNF10-222	ENST00000544805	PIP4K2A	P48426	406 aa	Predicted RBP	10.76	□□□□□ -0.69
RNF10-222	ENST00000544805	HDLBP	Q00341	1268 aa	Known RBP	10.76	□□□□□ -0.69

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