RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 CDHR2Q9BYE9 1310 aa15.28■□□□□ 0.04
CPSF7-223ENST00000544669 TCHHQ07283 1943 aa15.28■□□□□ 0.04
CPSF7-223ENST00000544669 PTPDC1A2A3K4 754 aa15.28■□□□□ 0.04
CPSF7-223ENST00000544669 ZNF165P49910 485 aa15.28■□□□□ 0.04
CPSF7-223ENST00000544669 IFIT5Q13325 482 aaKnown RBP15.28■□□□□ 0.04
CPSF7-223ENST00000544669 TTLL7Q6ZT98 887 aa15.28■□□□□ 0.04
CPSF7-223ENST00000544669 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
CPSF7-223ENST00000544669 TMOD3Q9NYL9 352 aa15.28■□□□□ 0.04
CPSF7-223ENST00000544669 SOS2Q07890 1332 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-223ENST00000544669 KINO60870 393 aaKnown RBP15.27■□□□□ 0.04
CPSF7-223ENST00000544669 CSF1RP07333 972 aa15.27■□□□□ 0.04
CPSF7-223ENST00000544669 GTF2F1P35269 517 aaKnown RBP eCLIP15.27■□□□□ 0.045e-10■■■■■ 57.2
CPSF7-223ENST00000544669 STX1AQ16623 288 aa15.27■□□□□ 0.04
CPSF7-223ENST00000544669 CCDC129Q6ZRS4 1044 aa15.27■□□□□ 0.04
CPSF7-223ENST00000544669 BRAPQ7Z569 592 aa15.27■□□□□ 0.04
CPSF7-223ENST00000544669 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-223ENST00000544669 KIAA1524Q8TCG1 905 aa15.27■□□□□ 0.04
CPSF7-223ENST00000544669 APPBP2Q92624 585 aa15.27■□□□□ 0.04
CPSF7-223ENST00000544669 JARID2Q92833 1246 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-223ENST00000544669 MAST3O60307 1309 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 JAK2O60674 1132 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 PDIA3P30101 505 aaKnown RBP15.27■□□□□ 0.03
CPSF7-223ENST00000544669 EVA1CP58658 441 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 ANO6Q4KMQ2 910 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 SARM1Q6SZW1 724 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 NCOA7Q8NI08 942 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 ANO10Q9NW15 660 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 TAF6LQ9Y6J9 622 aa15.27■□□□□ 0.03
CPSF7-223ENST00000544669 KCPQ6ZWJ8 1503 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 COL5A2P05997 1499 aaPredicted RBP15.26■□□□□ 0.03
CPSF7-223ENST00000544669 GLI3P10071 1580 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 A0A1W2PQ27 194 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 A0A1W2PQ64 194 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 A0A1W2PQD8 194 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 A1BGP04217 495 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 PIP4K2AP48426 406 aaPredicted RBP15.26■□□□□ 0.03
CPSF7-223ENST00000544669 FAM160A1Q05DH4 1040 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 TRDNQ13061 729 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 CAMK4Q16566 473 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 CPLX2Q6PUV4 134 aaKnown RBP15.26■□□□□ 0.03
CPSF7-223ENST00000544669 RALYLQ86SE5 291 aaKnown RBP15.26■□□□□ 0.03
CPSF7-223ENST00000544669 KCNG4Q8TDN1 519 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 ZBTB3Q9H5J0 574 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 CBX8Q9HC52 389 aa15.26■□□□□ 0.03
CPSF7-223ENST00000544669 SALL1Q9NSC2 1324 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 CDKL5O76039 1030 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
CPSF7-223ENST00000544669 STOX1Q6ZVD7 989 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 BRINP3Q76B58 766 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 DRC7Q8IY82 874 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 DDX11Q96FC9 970 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 PGBD1Q96JS3 809 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 AK7Q96M32 723 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 TRIM5Q9C035 493 aa15.25■□□□□ 0.03
CPSF7-223ENST00000544669 PAPPAQ13219 1627 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 ZNF213O14771 459 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 NR1I2O75469 434 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPSF7-223ENST00000544669 APOBRQ0VD83 1088 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 TPRNQ4KMQ1 711 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 LRRC24Q50LG9 513 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 FAM173BQ6P4H8 233 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 CCAR1Q8IX12 1150 aaKnown RBP15.24■□□□□ 0.03
CPSF7-223ENST00000544669 DDX17Q92841 729 aaKnown RBP15.24■□□□□ 0.03
CPSF7-223ENST00000544669 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 TTC12Q9H892 705 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-223ENST00000544669 RTEL1Q9NZ71 1219 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 NUP188Q5SRE5 1749 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 YEATS4O95619 227 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 ADALQ6DHV7 355 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 MRFAP1L1Q96HT8 127 aa15.24■□□□□ 0.03
CPSF7-223ENST00000544669 BECN2A8MW95 431 aa15.23■□□□□ 0.03
CPSF7-223ENST00000544669 CPLX1O14810 134 aa15.23■□□□□ 0.03
CPSF7-223ENST00000544669 UQCRFS1P1P0C7P4 283 aa15.23■□□□□ 0.03
CPSF7-223ENST00000544669 ADD1P35611 737 aaKnown RBP15.23■□□□□ 0.03
CPSF7-223ENST00000544669 ZNF75DP51815 510 aa15.23■□□□□ 0.03
CPSF7-223ENST00000544669 TPM4P67936 248 aa15.23■□□□□ 0.03
CPSF7-223ENST00000544669 GIGYF2Q6Y7W6 1299 aaKnown RBP15.23■□□□□ 0.03
CPSF7-223ENST00000544669 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
CPSF7-223ENST00000544669 ANKRD18BA2A2Z9 1011 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 CEP57L1Q8IYX8 460 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 POLR3EQ9NVU0 708 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 MAP3K15Q6ZN16 1313 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 CARMIL3Q8ND23 1372 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 CTDNEP1O95476 244 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 ME1P48163 572 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 UBE3CQ15386 1083 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 SF3A1Q15459 793 aaKnown RBP15.22■□□□□ 0.03
CPSF7-223ENST00000544669 SYNE3Q6ZMZ3 975 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 LUZP1Q86V48 1076 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 MRPS27Q92552 414 aaKnown RBP15.22■□□□□ 0.03
CPSF7-223ENST00000544669 C8orf76Q96K31 380 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 TBC1D2BQ9UPU7 963 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 NDUFB9Q9Y6M9 179 aa15.22■□□□□ 0.03
CPSF7-223ENST00000544669 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
CPSF7-223ENST00000544669 JMYQ8N9B5 988 aa15.21■□□□□ 0.03
CPSF7-223ENST00000544669 OSBP2Q969R2 916 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms