RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	FAM35A	Q86V20	835 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	NCAPG2	Q86XI2	1143 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	CEP120	Q8N960	986 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	GIPC2	Q8TF65	315 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	NPHS2	Q9NP85	383 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	LATS2	Q9NRM7	1088 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	STARD13	Q9Y3M8	1113 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	SPDYE3	A6NKU9	549 aa		7.32	□□□□□ -1.24
RAP1B-231	ENST00000544639	CPB1	P15086	417 aa		7.32	□□□□□ -1.24
RAP1B-231	ENST00000544639	ACPP	P15309	386 aa		7.32	□□□□□ -1.24
RAP1B-231	ENST00000544639	ZNF16	P17020	682 aa	Predicted RBP	7.32	□□□□□ -1.24
RAP1B-231	ENST00000544639	EIF2AK2	P19525	551 aa	Known RBP	7.32	□□□□□ -1.24
RAP1B-231	ENST00000544639	FGD1	P98174	961 aa		7.32	□□□□□ -1.24
RAP1B-231	ENST00000544639	PLVAP	Q9BX97	442 aa		7.32	□□□□□ -1.24
RAP1B-231	ENST00000544639	GHRH	P01286	108 aa		7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639	PERM1	Q5SV97	790 aa		7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639	KIAA0319	Q5VV43	1072 aa		7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639	PI16	Q6UXB8	463 aa		7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639	EPS8L3	Q8TE67	593 aa	Known RBP	7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639	SPACA7	Q96KW9	195 aa		7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639	LPIN3	Q9BQK8	851 aa		7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639	PRDM6	Q9NQX0	595 aa		7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639	FRRS1L	Q9P0K9	344 aa		7.31	□□□□□ -1.24
RAP1B-231	ENST00000544639		A0A1W2PP55	124 aa		7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	ATP11A	P98196	1134 aa		7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	ZNF326	Q5BKZ1	582 aa	Known RBP	7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	PSAPL1	Q6NUJ1	521 aa		7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	PLD4	Q96BZ4	506 aa		7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	DUSP9	Q99956	384 aa	Known RBP	7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	ZKSCAN3	Q9BRR0	538 aa		7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	RBSN	Q9H1K0	784 aa		7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	DZANK1	Q9NVP4	752 aa		7.3	□□□□□ -1.24
RAP1B-231	ENST00000544639	NFKBIE	O00221	500 aa		7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	ALB	P02768	609 aa		7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	ELMSAN1	Q6PJG2	1045 aa		7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	C20orf204	Q6ZNR8	217 aa		7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	OSMR	Q99650	979 aa		7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	SMG9	Q9H0W8	520 aa	Known RBP	7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	RASSF4	Q9H2L5	321 aa		7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	RNF19A	Q9NV58	838 aa		7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	NLRP2	Q9NX02	1062 aa		7.29	□□□□□ -1.24
RAP1B-231	ENST00000544639	GADD45B	O75293	160 aa	Predicted RBP	7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	TRPA1	O75762	1119 aa		7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	GNA15	P30679	374 aa		7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	GATA4	P43694	442 aa		7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	PRRT3	Q5FWE3	981 aa		7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	TTC9	Q92623	222 aa		7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	HHIP	Q96QV1	700 aa		7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	PBX4	Q9BYU1	374 aa		7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	PARP2	Q9UGN5	583 aa		7.28	□□□□□ -1.24
RAP1B-231	ENST00000544639	MICALL1	Q8N3F8	863 aa		7.27	□□□□□ -1.25
RAP1B-231	ENST00000544639	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.27	□□□□□ -1.25
RAP1B-231	ENST00000544639	NUDT8	Q8WV74	236 aa		7.27	□□□□□ -1.25
RAP1B-231	ENST00000544639	FRMD6	Q96NE9	622 aa		7.27	□□□□□ -1.25
RAP1B-231	ENST00000544639	TCF12	Q99081	682 aa		7.27	□□□□□ -1.25
RAP1B-231	ENST00000544639	BHLHE41	Q9C0J9	482 aa	Predicted RBP	7.27	□□□□□ -1.25
RAP1B-231	ENST00000544639	LIN7B	Q9HAP6	207 aa		7.27	□□□□□ -1.25
RAP1B-231	ENST00000544639	SPG7	Q9UQ90	795 aa		7.27	□□□□□ -1.25
RAP1B-231	ENST00000544639	RGS9	O75916	674 aa	Predicted RBP	7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	DAB2	P98082	770 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	COL9A3	Q14050	684 aa	Predicted RBP	7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	GRM2	Q14416	872 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	CEP135	Q66GS9	1140 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	PRPF40B	Q6NWY9	871 aa	Known RBP	7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	TMC4	Q7Z404	712 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	CCNJL	Q8IV13	435 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	GLIS3	Q8NEA6	775 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	NXPE3	Q969Y0	559 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	POP1	Q99575	1024 aa	Known RBP	7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	BCO2	Q9BYV7	579 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	EHD4	Q9H223	541 aa		7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639	JPH1	Q9HDC5	661 aa	Predicted RBP	7.26	□□□□□ -1.25
RAP1B-231	ENST00000544639		M0R082	166 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	PDE2A	O00408	941 aa	Predicted RBP	7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	GIPC1	O14908	333 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	XPC	Q01831	940 aa	Predicted RBP	7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	GRIK5	Q16478	980 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	C8orf86	Q6ZUL3	223 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639		Q8N3U1	123 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	ZNF417	Q8TAU3	575 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	ZNF428	Q96B54	188 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	FAM161B	Q96MY7	647 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	OSBPL7	Q9BZF2	842 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	C12orf49	Q9H741	205 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	TRIM33	Q9UPN9	1127 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	TRAK1	Q9UPV9	953 aa		7.25	□□□□□ -1.25
RAP1B-231	ENST00000544639	UNCX	A6NJT0	531 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	LILRB5	O75023	590 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	APBA3	O96018	575 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	AFF1	P51825	1210 aa	Known RBP	7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	PSMD2	Q13200	908 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	DOC2B	Q14184	412 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	NXPE4	Q6UWF7	544 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	ADAMTSL4	Q6UY14	1074 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	NACC1	Q96RE7	527 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	ABCB6	Q9NP58	842 aa		7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms