RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 GPRC5DQ9NZD1 345 aa7.02□□□□□ -1.29
CLSTN3-215ENST00000544584 POLLQ9UGP5 575 aa7.02□□□□□ -1.29
CLSTN3-215ENST00000544584 HDAC9Q9UKV0 1011 aa7.02□□□□□ -1.29
CLSTN3-215ENST00000544584 MINPP1Q9UNW1 487 aa7.02□□□□□ -1.29
CLSTN3-215ENST00000544584 TLL2Q9Y6L7 1015 aa7.02□□□□□ -1.29
CLSTN3-215ENST00000544584 MROH5Q6ZUA9 1318 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 ZNF541Q9H0D2 1346 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 USP17L3A6NCW0 530 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 USP17L4A6NCW7 530 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 F6X3S4 739 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 AOC2O75106 756 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 RAD17O75943 681 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 UBTFL1P0CB47 393 aaPredicted RBP7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 GMPSP49915 693 aaPredicted RBP7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 CAVIN4Q5BKX8 364 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 MAP1SQ66K74 1059 aaPredicted RBP7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 LMBR1LQ6UX01 489 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 USP17L1Q7RTZ2 530 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 FTSJ3Q8IY81 847 aaKnown RBP7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 TRMT2AQ8IZ69 625 aaKnown RBP7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 SSH1Q8WYL5 1049 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 DCPSQ96C86 337 aaKnown RBP7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 CNOT7Q9UIV1 285 aaKnown RBP7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 FBXO3Q9UK99 471 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 ZNF804BA4D1E1 1349 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 PITPNM2Q9BZ72 1349 aa7.01□□□□□ -1.29
CLSTN3-215ENST00000544584 MED23Q9ULK4 1368 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 TRIOBPQ9H2D6 2365 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 PSMD14O00487 310 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 MYO1BO43795 1136 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 FRAT2O75474 233 aaPredicted RBP7□□□□□ -1.29
CLSTN3-215ENST00000544584 VIL1P09327 827 aaKnown RBP7□□□□□ -1.29
CLSTN3-215ENST00000544584 CHRNDQ07001 517 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 STRIP1Q5VSL9 837 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 CDC37L1Q7L3B6 337 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 POTEDQ86YR6 584 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 MICALL2Q8IY33 904 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 MIER1Q8N108 512 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 JARID2Q92833 1246 aaPredicted RBP7□□□□□ -1.29
CLSTN3-215ENST00000544584 FBXW7Q969H0 707 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 HHIPL1Q96JK4 782 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 DBNDD1Q9H9R9 158 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 RBBP6Q7Z6E9 1792 aaKnown RBP7□□□□□ -1.29
CLSTN3-215ENST00000544584 UTYO14607 1347 aa7□□□□□ -1.29
CLSTN3-215ENST00000544584 IFIT1P09914 478 aaKnown RBP6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 USP17L8P0C7I0 530 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 NF2P35240 595 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 EPS15P42566 896 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 SCNN1DP51172 638 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 RARSP54136 660 aaKnown RBP6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 CASP7P55210 303 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 UBE4AQ14139 1066 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 DOK7Q18PE1 504 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 CST9Q5W186 159 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 TTLL5Q6EMB2 1281 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 RSBN1LQ6PCB5 846 aaPredicted RBP6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 PAXIP1Q6ZW49 1069 aaPredicted RBP6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 SULF1Q8IWU6 871 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 CDCA7LQ96GN5 454 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 GNL3LQ9NVN8 582 aaKnown RBP6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 NOB1Q9ULX3 412 aaKnown RBP6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 ZBED9Q6R2W3 1325 aa6.99□□□□□ -1.29
CLSTN3-215ENST00000544584 FOXO4P98177 505 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 GRM1Q13255 1194 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 KIF4BQ2VIQ3 1234 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 METTL24Q5JXM2 366 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 ZKSCAN2Q63HK3 967 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 C15orf52Q6ZUT6 534 aaKnown RBP6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 SAPCD2Q86UD0 394 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 TBC1D22AQ8WUA7 517 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 FRAT1Q92837 279 aaPredicted RBP6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 CEP126Q9P2H0 1117 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 SNED1Q8TER0 1413 aa6.98□□□□□ -1.29
CLSTN3-215ENST00000544584 LAMB2P55268 1798 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 YDJCA8MPS7 323 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 PLIN1O60240 522 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 NBPF7P0C2Y1 421 aaPredicted RBP6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 SLC5A1P13866 664 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 FKBP1AP62942 108 aaKnown RBP6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 FMR1Q06787 632 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 PUM3Q15397 648 aaKnown RBP6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 RABL6Q3YEC7 729 aaPredicted RBP6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 ATF7IPQ6VMQ6 1270 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 KRT26Q7Z3Y9 468 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 C2orf69Q8N8R5 385 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 USP44Q9H0E7 712 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 BICC1Q9H694 974 aaKnown RBP6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 SAGE1Q9NXZ1 904 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 PGAP2Q9UHJ9 254 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 AKAP2Q9Y2D5 859 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 MYH3P11055 1940 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 MAST3O60307 1309 aa6.97□□□□□ -1.29
CLSTN3-215ENST00000544584 DDX60Q8IY21 1712 aaKnown RBP6.96□□□□□ -1.29
CLSTN3-215ENST00000544584 SASH1O94885 1247 aa6.96□□□□□ -1.3
CLSTN3-215ENST00000544584 GNAI2P04899 355 aa6.96□□□□□ -1.3
CLSTN3-215ENST00000544584 HIBADHP31937 336 aaKnown RBP6.96□□□□□ -1.3
CLSTN3-215ENST00000544584 IL15P40933 162 aaPredicted RBP6.96□□□□□ -1.3
CLSTN3-215ENST00000544584 FKBP1BP68106 108 aa6.96□□□□□ -1.3
CLSTN3-215ENST00000544584 TNFAIP1Q13829 316 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms