RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 EVI5LQ96CN4 794 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 ZNF594Q96JF6 807 aaPredicted RBP17.81■□□□□ 0.44
CHFR-223ENST00000544268 PRIMPOLQ96LW4 560 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 TAF1LQ8IZX4 1826 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 IRS4O14654 1257 aaPredicted RBP17.81■□□□□ 0.44
CHFR-223ENST00000544268 GNPATO15228 680 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 ME3Q16798 604 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 AMIGO3Q86WK7 504 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 TEX2Q8IWB9 1127 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 FSD1Q9BTV5 496 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 RPS6KA4O75676 772 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 TFCP2Q12800 502 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 MPNDQ8N594 471 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 LRRC4BQ9NT99 713 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 NIP7Q9Y221 180 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHFR-223ENST00000544268 BCORQ6W2J9 1755 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 CSF1RP07333 972 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 GJB2P29033 226 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 GTF2F1P35269 517 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHFR-223ENST00000544268 KCNJ4P48050 445 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 HMGN5P82970 282 aaKnown RBP17.8■□□□□ 0.44
CHFR-223ENST00000544268 GPATCH3Q96I76 525 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 DBNLQ9UJU6 430 aaKnown RBP17.8■□□□□ 0.44
CHFR-223ENST00000544268 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
CHFR-223ENST00000544268 WDR33Q9C0J8 1336 aaKnown RBP17.79■□□□□ 0.44
CHFR-223ENST00000544268 FIBPO43427 364 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 STX6O43752 255 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 CCDC129Q6ZRS4 1044 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
CHFR-223ENST00000544268 CCDC57Q2TAC2 916 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 ZNF710Q8N1W2 664 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 SEC62Q99442 399 aaKnown RBP17.79■□□□□ 0.44
CHFR-223ENST00000544268 SMC3Q9UQE7 1217 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 ZNF652Q9Y2D9 606 aa17.79■□□□□ 0.44
CHFR-223ENST00000544268 CTSWP56202 376 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 CBX1P83916 185 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 FAM173BQ6P4H8 233 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
CHFR-223ENST00000544268 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 ZSWIM6Q9HCJ5 1215 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 SLC27A2O14975 620 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 PARP10Q53GL7 1025 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 CLEC4GQ6UXB4 293 aa17.78■□□□□ 0.44
CHFR-223ENST00000544268 UTP14AQ9BVJ6 771 aaKnown RBP17.78■□□□□ 0.44
CHFR-223ENST00000544268 C4BP0C0L5 1744 aa17.77■□□□□ 0.44
CHFR-223ENST00000544268 SECISBP2LQ93073 1101 aaKnown RBP17.77■□□□□ 0.44
CHFR-223ENST00000544268 PUS3Q9BZE2 481 aaKnown RBP17.77■□□□□ 0.44
CHFR-223ENST00000544268 GREM2Q9H772 168 aa17.77■□□□□ 0.44
CHFR-223ENST00000544268 SRP68Q9UHB9 627 aaKnown RBP17.77■□□□□ 0.44
CHFR-223ENST00000544268 RTCBQ9Y3I0 505 aaKnown RBP17.77■□□□□ 0.44
CHFR-223ENST00000544268 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
CHFR-223ENST00000544268 MYH3P11055 1940 aa17.77■□□□□ 0.44
CHFR-223ENST00000544268 SH3TC1Q8TE82 1336 aa17.77■□□□□ 0.43
CHFR-223ENST00000544268 EYA2O00167 538 aa17.77■□□□□ 0.43
CHFR-223ENST00000544268 EPB41L2O43491 1005 aaKnown RBP17.77■□□□□ 0.43
CHFR-223ENST00000544268 PDE8AO60658 829 aa17.77■□□□□ 0.43
CHFR-223ENST00000544268 DNM1Q05193 864 aaKnown RBP17.77■□□□□ 0.43
CHFR-223ENST00000544268 TNNI3KQ59H18 835 aa17.77■□□□□ 0.43
CHFR-223ENST00000544268 MAP4K1Q92918 833 aa17.77■□□□□ 0.43
CHFR-223ENST00000544268 BCL2L12Q9HB09 334 aa17.77■□□□□ 0.43
CHFR-223ENST00000544268 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.43
CHFR-223ENST00000544268 NTSR2O95665 410 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 MBD3O95983 291 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 HCLS1P14317 486 aaPredicted RBP17.76■□□□□ 0.43
CHFR-223ENST00000544268 IFIT5Q13325 482 aaKnown RBP17.76■□□□□ 0.43
CHFR-223ENST00000544268 TAF3Q5VWG9 929 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 USPL1Q5W0Q7 1092 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 DNAJC2Q99543 621 aaKnown RBP17.76■□□□□ 0.43
CHFR-223ENST00000544268 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 RXRBP28702 533 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 STK3Q13188 491 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 FERMT3Q86UX7 667 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 NARFQ9UHQ1 456 aa17.76■□□□□ 0.43
CHFR-223ENST00000544268 VPS37CA5D8V6 355 aaPredicted RBP17.75■□□□□ 0.43
CHFR-223ENST00000544268 F13A1P00488 732 aa17.75■□□□□ 0.43
CHFR-223ENST00000544268 ITGA6P23229 1130 aa17.75■□□□□ 0.43
CHFR-223ENST00000544268 IL15P40933 162 aaPredicted RBP17.75■□□□□ 0.43
CHFR-223ENST00000544268 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
CHFR-223ENST00000544268 RGS17Q9UGC6 210 aaPredicted RBP17.75■□□□□ 0.43
CHFR-223ENST00000544268 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
CHFR-223ENST00000544268 SCN7AQ01118 1682 aa17.75■□□□□ 0.43
CHFR-223ENST00000544268 CIAO1O76071 339 aa17.74■□□□□ 0.43
CHFR-223ENST00000544268 DNTTIP2Q5QJE6 756 aaKnown RBP17.74■□□□□ 0.43
CHFR-223ENST00000544268 ARHGEF1Q92888 912 aaKnown RBP17.74■□□□□ 0.43
CHFR-223ENST00000544268 PHF14O94880 888 aa17.74■□□□□ 0.43
CHFR-223ENST00000544268 TBC1D9BQ66K14 1250 aa17.74■□□□□ 0.43
CHFR-223ENST00000544268 BICDL1Q6ZP65 573 aa17.74■□□□□ 0.43
CHFR-223ENST00000544268 DDX46Q7L014 1031 aaKnown RBP17.74■□□□□ 0.43
CHFR-223ENST00000544268 KCNB2Q92953 911 aa17.74■□□□□ 0.43
CHFR-223ENST00000544268 AK7Q96M32 723 aa17.74■□□□□ 0.43
CHFR-223ENST00000544268 ATP2B3Q16720 1220 aa17.73■□□□□ 0.43
CHFR-223ENST00000544268 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms