RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 PDE8BO95263 885 aa12.51□□□□□ -0.41
LDHC-208ENST00000544105 IFIT1P09914 478 aaKnown RBP12.51□□□□□ -0.41
LDHC-208ENST00000544105 ANKRD18AQ8IVF6 992 aa12.51□□□□□ -0.41
LDHC-208ENST00000544105 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
LDHC-208ENST00000544105 HAUS7Q99871 368 aa12.51□□□□□ -0.41
LDHC-208ENST00000544105 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
LDHC-208ENST00000544105 SLC5A1P13866 664 aa12.5□□□□□ -0.41
LDHC-208ENST00000544105 PSEN1P49768 467 aa12.5□□□□□ -0.41
LDHC-208ENST00000544105 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
LDHC-208ENST00000544105 SMIM5Q71RC9 77 aa12.5□□□□□ -0.41
LDHC-208ENST00000544105 HSCBQ8IWL3 235 aa12.5□□□□□ -0.41
LDHC-208ENST00000544105 IL27Q8NEV9 243 aa12.5□□□□□ -0.41
LDHC-208ENST00000544105 XAGE2Q96GT9 111 aa12.5□□□□□ -0.41
LDHC-208ENST00000544105 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
LDHC-208ENST00000544105 DNAJC2Q99543 621 aaKnown RBP12.5□□□□□ -0.41
LDHC-208ENST00000544105 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
LDHC-208ENST00000544105 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.5□□□□□ -0.41
LDHC-208ENST00000544105 CARMIL3Q8ND23 1372 aa12.5□□□□□ -0.41
LDHC-208ENST00000544105 TAF1LQ8IZX4 1826 aa12.49□□□□□ -0.41
LDHC-208ENST00000544105 UQCRFS1P1P0C7P4 283 aa12.49□□□□□ -0.41
LDHC-208ENST00000544105 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
LDHC-208ENST00000544105 RABEP1Q15276 862 aa12.49□□□□□ -0.41
LDHC-208ENST00000544105 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
LDHC-208ENST00000544105 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
LDHC-208ENST00000544105 LPIN2Q92539 896 aa12.49□□□□□ -0.41
LDHC-208ENST00000544105 MYH3P11055 1940 aa12.49□□□□□ -0.41
LDHC-208ENST00000544105 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 ZNF609O15014 1411 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 RAD50Q92878 1312 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 SGSM2O43147 1006 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
LDHC-208ENST00000544105 ST5P78524 1137 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 NFIXQ14938 502 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 CNBD1Q8NA66 436 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 SEC31BQ9NQW1 1179 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
LDHC-208ENST00000544105 RFX7Q2KHR2 1363 aa12.47□□□□□ -0.41
LDHC-208ENST00000544105 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
LDHC-208ENST00000544105 G3V3G9 751 aa12.47□□□□□ -0.41
LDHC-208ENST00000544105 ANAPC15P60006 121 aa12.47□□□□□ -0.41
LDHC-208ENST00000544105 FKBP4Q02790 459 aaKnown RBP eCLIP12.47□□□□□ -0.41
LDHC-208ENST00000544105 TTF1Q15361 905 aaPredicted RBP12.47□□□□□ -0.41
LDHC-208ENST00000544105 NLGN1Q8N2Q7 840 aa12.47□□□□□ -0.41
LDHC-208ENST00000544105 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
LDHC-208ENST00000544105 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
LDHC-208ENST00000544105 GOLIM4O00461 696 aa12.46□□□□□ -0.41
LDHC-208ENST00000544105 GYS1P13807 737 aa12.46□□□□□ -0.41
LDHC-208ENST00000544105 KCNJ4P48050 445 aa12.46□□□□□ -0.41
LDHC-208ENST00000544105 RPS8P62241 208 aaKnown RBP12.46□□□□□ -0.41
LDHC-208ENST00000544105 ZSCAN25Q6NSZ9 544 aa12.46□□□□□ -0.41
LDHC-208ENST00000544105 SNX21Q969T3 373 aa12.46□□□□□ -0.41
LDHC-208ENST00000544105 ZNF512BQ96KM6 892 aaPredicted RBP12.46□□□□□ -0.41
LDHC-208ENST00000544105 ANKRD2Q9GZV1 360 aa12.46□□□□□ -0.41
LDHC-208ENST00000544105 RGS17Q9UGC6 210 aaPredicted RBP12.46□□□□□ -0.41
LDHC-208ENST00000544105 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
LDHC-208ENST00000544105 SERPINB2P05120 415 aa12.45□□□□□ -0.42
LDHC-208ENST00000544105 ZFYP08048 801 aaPredicted RBP12.45□□□□□ -0.42
LDHC-208ENST00000544105 NMIQ13287 307 aaPredicted RBP12.45□□□□□ -0.42
LDHC-208ENST00000544105 VGLL2Q8N8G2 317 aa12.45□□□□□ -0.42
LDHC-208ENST00000544105 HELBQ8NG08 1087 aaPredicted RBP12.45□□□□□ -0.42
LDHC-208ENST00000544105 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
LDHC-208ENST00000544105 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.45□□□□□ -0.42
LDHC-208ENST00000544105 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
LDHC-208ENST00000544105 LAMB2P55268 1798 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 TM4SF1P30408 202 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 ADORA1P30542 326 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 CHRNDQ07001 517 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
LDHC-208ENST00000544105 MCMDC2Q4G0Z9 681 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 CAVIN4Q5BKX8 364 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 RNF20Q5VTR2 975 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 AMIGO3Q86WK7 504 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
LDHC-208ENST00000544105 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 HELLSQ9NRZ9 838 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 RIC1Q4ADV7 1423 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
LDHC-208ENST00000544105 DDX60Q8IY21 1712 aaKnown RBP12.43□□□□□ -0.42
LDHC-208ENST00000544105 RNF113AO15541 343 aaKnown RBP12.43□□□□□ -0.42
LDHC-208ENST00000544105 TAF5LO75529 589 aa12.43□□□□□ -0.42
LDHC-208ENST00000544105 HSP90AA1P07900 732 aaKnown RBP12.43□□□□□ -0.42
LDHC-208ENST00000544105 ZKSCAN1P17029 563 aaPredicted RBP12.43□□□□□ -0.42
LDHC-208ENST00000544105 FGFR2P21802 821 aa12.43□□□□□ -0.42
LDHC-208ENST00000544105 HSPA4P34932 840 aa12.43□□□□□ -0.42
LDHC-208ENST00000544105 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
LDHC-208ENST00000544105 MCM2P49736 904 aa12.43□□□□□ -0.42
LDHC-208ENST00000544105 UBE4AQ14139 1066 aa12.43□□□□□ -0.42
LDHC-208ENST00000544105 CCDC102BQ68D86 513 aa12.43□□□□□ -0.42
LDHC-208ENST00000544105 RBM17Q96I25 401 aaKnown RBP12.43□□□□□ -0.42
LDHC-208ENST00000544105 STK32BQ9NY57 414 aa12.43□□□□□ -0.42
LDHC-208ENST00000544105 BAG6P46379 1132 aa12.42□□□□□ -0.42
LDHC-208ENST00000544105 PRR5LQ6MZQ0 368 aa12.42□□□□□ -0.42
LDHC-208ENST00000544105 VPS37DQ86XT2 251 aa12.42□□□□□ -0.42
LDHC-208ENST00000544105 EDC3Q96F86 508 aaKnown RBP12.42□□□□□ -0.42
LDHC-208ENST00000544105 FAM227BQ96M60 508 aa12.42□□□□□ -0.42
LDHC-208ENST00000544105 LSG1Q9H089 658 aaKnown RBP12.42□□□□□ -0.42
LDHC-208ENST00000544105 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
LDHC-208ENST00000544105 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms