RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CASP8AP2Q9UKL3 1982 aa29.01■■■□□ 2.23
CDKN3-207ENST00000543789 SLC4A2P04920 1241 aa29■■■□□ 2.23
CDKN3-207ENST00000543789 RASAL3Q86YV0 1011 aa29■■■□□ 2.23
CDKN3-207ENST00000543789 OGFOD1Q8N543 542 aa29■■■□□ 2.23
CDKN3-207ENST00000543789 CCDC27Q2M243 656 aa28.99■■■□□ 2.23
CDKN3-207ENST00000543789 TWISTNBQ3B726 338 aaPredicted RBP28.99■■■□□ 2.23
CDKN3-207ENST00000543789 DACT2Q5SW24 774 aa28.99■■■□□ 2.23
CDKN3-207ENST00000543789 G2E3Q7L622 706 aa28.99■■■□□ 2.23
CDKN3-207ENST00000543789 UBE3BQ7Z3V4 1068 aa28.99■■■□□ 2.23
CDKN3-207ENST00000543789 MXD3Q9BW11 206 aa28.99■■■□□ 2.23
CDKN3-207ENST00000543789 COA1Q9GZY4 146 aa28.99■■■□□ 2.23
CDKN3-207ENST00000543789 LEMD3Q9Y2U8 911 aa28.99■■■□□ 2.23
CDKN3-207ENST00000543789 POLR2AP24928 1970 aaKnown RBP28.99■■■□□ 2.23
CDKN3-207ENST00000543789 IGHMBP2P38935 993 aaKnown RBP28.98■■■□□ 2.23
CDKN3-207ENST00000543789 NBPF9Q3BBW0 867 aa28.98■■■□□ 2.23
CDKN3-207ENST00000543789 STRIP1Q5VSL9 837 aa28.98■■■□□ 2.23
CDKN3-207ENST00000543789 WWC1Q8IX03 1113 aa28.98■■■□□ 2.23
CDKN3-207ENST00000543789 FBXW7Q969H0 707 aa28.98■■■□□ 2.23
CDKN3-207ENST00000543789 SCAF8Q9UPN6 1271 aaKnown RBP28.98■■■□□ 2.23
CDKN3-207ENST00000543789 MYO3BQ8WXR4 1341 aa28.96■■■□□ 2.23
CDKN3-207ENST00000543789 UBE2Q2LH0YL09 131 aa28.95■■■□□ 2.22
CDKN3-207ENST00000543789 MMP14P50281 582 aa28.95■■■□□ 2.22
CDKN3-207ENST00000543789 GCKRQ14397 625 aa28.95■■■□□ 2.22
CDKN3-207ENST00000543789 PRAMEF18Q5VWM3 479 aa28.95■■■□□ 2.22
CDKN3-207ENST00000543789 MOB2Q70IA6 237 aa28.95■■■□□ 2.22
CDKN3-207ENST00000543789 TXNRD3Q86VQ6 643 aa28.95■■■□□ 2.22
CDKN3-207ENST00000543789 PLA2G12BQ9BX93 195 aa28.95■■■□□ 2.22
CDKN3-207ENST00000543789 ANKRD2Q9GZV1 360 aa28.95■■■□□ 2.22
CDKN3-207ENST00000543789 WNT10BO00744 389 aa28.94■■■□□ 2.22
CDKN3-207ENST00000543789 ITGA6P23229 1130 aa28.94■■■□□ 2.22
CDKN3-207ENST00000543789 CCDC184Q52MB2 194 aa28.94■■■□□ 2.22
CDKN3-207ENST00000543789 MPHOSPH8Q99549 860 aa28.94■■■□□ 2.22
CDKN3-207ENST00000543789 TTLL5Q6EMB2 1281 aa28.93■■■□□ 2.22
CDKN3-207ENST00000543789 ZNF804BA4D1E1 1349 aa28.93■■■□□ 2.22
CDKN3-207ENST00000543789 FLIIQ13045 1269 aa28.92■■■□□ 2.22
CDKN3-207ENST00000543789 TTLL12Q14166 644 aaPredicted RBP28.92■■■□□ 2.22
CDKN3-207ENST00000543789 MYH16Q9H6N6 1097 aa28.92■■■□□ 2.22
CDKN3-207ENST00000543789 IL16Q14005 1332 aa28.92■■■□□ 2.22
CDKN3-207ENST00000543789 CSF1RP07333 972 aa28.91■■■□□ 2.22
CDKN3-207ENST00000543789 NF2P35240 595 aa28.9■■■□□ 2.22
CDKN3-207ENST00000543789 CASP7P55210 303 aa28.9■■■□□ 2.22
CDKN3-207ENST00000543789 CTU1Q7Z7A3 348 aaKnown RBP28.9■■■□□ 2.22
CDKN3-207ENST00000543789 DNAAF4Q8WXU2 420 aa28.9■■■□□ 2.22
CDKN3-207ENST00000543789 HDAC9Q9UKV0 1011 aa28.9■■■□□ 2.22
CDKN3-207ENST00000543789 KLRK1P26718 216 aa28.89■■■□□ 2.22
CDKN3-207ENST00000543789 FKBP5Q13451 457 aaPredicted RBP28.89■■■□□ 2.22
CDKN3-207ENST00000543789 SASH1O94885 1247 aa28.88■■■□□ 2.21
CDKN3-207ENST00000543789 KCNJ4P48050 445 aa28.88■■■□□ 2.21
CDKN3-207ENST00000543789 NCBP3Q53F19 620 aaKnown RBP28.88■■■□□ 2.21
CDKN3-207ENST00000543789 LINS1Q8NG48 757 aa28.88■■■□□ 2.21
CDKN3-207ENST00000543789 GTF2IP78347 998 aa28.87■■■□□ 2.21
CDKN3-207ENST00000543789 KIAA0825Q8IV33 1275 aa28.87■■■□□ 2.21
CDKN3-207ENST00000543789 PAPPA2Q9BXP8 1791 aa28.87■■■□□ 2.21
CDKN3-207ENST00000543789 SLC34A2O95436 690 aa28.86■■■□□ 2.21
CDKN3-207ENST00000543789 CHRNDQ07001 517 aa28.86■■■□□ 2.21
CDKN3-207ENST00000543789 ANKRD18BA2A2Z9 1011 aa28.85■■■□□ 2.21
CDKN3-207ENST00000543789 TM4SF4P48230 202 aa28.85■■■□□ 2.21
CDKN3-207ENST00000543789 APOBEC3FQ8IUX4 373 aaKnown RBP28.85■■■□□ 2.21
CDKN3-207ENST00000543789 CD209Q9NNX6 404 aa28.85■■■□□ 2.21
CDKN3-207ENST00000543789 TBC1D8O95759 1140 aa28.84■■■□□ 2.21
CDKN3-207ENST00000543789 ARMC9Q7Z3E5 817 aa28.84■■■□□ 2.21
CDKN3-207ENST00000543789 PSME4Q14997 1843 aa28.84■■■□□ 2.21
CDKN3-207ENST00000543789 VAMP4O75379 141 aa28.83■■■□□ 2.21
CDKN3-207ENST00000543789 SOX10P56693 466 aa28.83■■■□□ 2.21
CDKN3-207ENST00000543789 PTPN12Q05209 780 aaKnown RBP28.83■■■□□ 2.21
CDKN3-207ENST00000543789 ZBED3Q96IU2 234 aaPredicted RBP28.83■■■□□ 2.21
CDKN3-207ENST00000543789 FANCIQ9NVI1 1328 aa28.82■■■□□ 2.2
CDKN3-207ENST00000543789 MKRN3Q13064 507 aaKnown RBP28.81■■■□□ 2.2
CDKN3-207ENST00000543789 PRKG1Q13976 671 aa28.81■■■□□ 2.2
CDKN3-207ENST00000543789 PKN2Q16513 984 aaKnown RBP28.81■■■□□ 2.2
CDKN3-207ENST00000543789 ZNF296Q8WUU4 475 aaPredicted RBP28.81■■■□□ 2.2
CDKN3-207ENST00000543789 SNAP23O00161 211 aa28.8■■■□□ 2.2
CDKN3-207ENST00000543789 TAF5LO75529 589 aa28.8■■■□□ 2.2
CDKN3-207ENST00000543789 IFIT5Q13325 482 aaKnown RBP28.8■■■□□ 2.2
CDKN3-207ENST00000543789 DLGAP5Q15398 846 aa28.8■■■□□ 2.2
CDKN3-207ENST00000543789 FOXO4P98177 505 aa28.79■■■□□ 2.2
CDKN3-207ENST00000543789 SREBF2Q12772 1141 aa28.79■■■□□ 2.2
CDKN3-207ENST00000543789 C15orf52Q6ZUT6 534 aaKnown RBP28.79■■■□□ 2.2
CDKN3-207ENST00000543789 WDR63Q8IWG1 891 aa28.79■■■□□ 2.2
CDKN3-207ENST00000543789 HELBQ8NG08 1087 aaPredicted RBP28.79■■■□□ 2.2
CDKN3-207ENST00000543789 LDLRAD1Q5T700 205 aa28.78■■■□□ 2.2
CDKN3-207ENST00000543789 DEFB129Q9H1M3 183 aa28.78■■■□□ 2.2
CDKN3-207ENST00000543789 HPS5Q9UPZ3 1129 aa28.78■■■□□ 2.2
CDKN3-207ENST00000543789 CHMP3Q9Y3E7 222 aa28.78■■■□□ 2.2
CDKN3-207ENST00000543789 SALL2Q9Y467 1007 aaPredicted RBP28.78■■■□□ 2.2
CDKN3-207ENST00000543789 AKAP11Q9UKA4 1901 aa28.77■■■□□ 2.2
CDKN3-207ENST00000543789 GPR25O00155 361 aa28.77■■■□□ 2.2
CDKN3-207ENST00000543789 EXOSC9Q06265 439 aaKnown RBP28.77■■■□□ 2.2
CDKN3-207ENST00000543789 NOM1Q5C9Z4 860 aaKnown RBP28.77■■■□□ 2.2
CDKN3-207ENST00000543789 CERS5Q8N5B7 392 aa28.77■■■□□ 2.2
CDKN3-207ENST00000543789 ANGEL1Q9UNK9 670 aaKnown RBP28.77■■■□□ 2.2
CDKN3-207ENST00000543789 IRS2Q9Y4H2 1338 aa28.76■■■□□ 2.19
CDKN3-207ENST00000543789 F6X3S4 739 aa28.76■■■□□ 2.19
CDKN3-207ENST00000543789 BEND3Q5T5X7 828 aa28.76■■■□□ 2.19
CDKN3-207ENST00000543789 MTMR14Q8NCE2 650 aa28.76■■■□□ 2.19
CDKN3-207ENST00000543789 MRS2Q9HD23 443 aa28.76■■■□□ 2.19
CDKN3-207ENST00000543789 SPRYD7Q5W111 196 aa28.75■■■□□ 2.19
CDKN3-207ENST00000543789 ZNF804AQ7Z570 1209 aa28.75■■■□□ 2.19
CDKN3-207ENST00000543789 MYH3P11055 1940 aa28.75■■■□□ 2.19
CDKN3-207ENST00000543789 IL1R1P14778 569 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms