RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 APOBRQ0VD83 1088 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 SCARF1Q14162 830 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 SMARCC2Q8TAQ2 1214 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 DDX11Q96FC9 970 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 SPATA32Q96LK8 384 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 AGXT2Q9BYV1 514 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 CCDC39Q9UFE4 941 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
PTPN6-222ENST00000543744 LRP6O75581 1613 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 GIMAP6Q6P9H5 292 aa21■□□□□ 0.95
PTPN6-222ENST00000543744 ANO8Q9HCE9 1232 aaPredicted RBP21■□□□□ 0.95
PTPN6-222ENST00000543744 CNNM1Q9NRU3 951 aa21■□□□□ 0.95
PTPN6-222ENST00000543744 RIC1Q4ADV7 1423 aa21■□□□□ 0.95
PTPN6-222ENST00000543744 TFIP11Q9UBB9 837 aaKnown RBP21■□□□□ 0.95
PTPN6-222ENST00000543744 GOLGA6L4A6NEF3 574 aa20.99■□□□□ 0.95
PTPN6-222ENST00000543744 ERVV-1B6SEH8 477 aa20.99■□□□□ 0.95
PTPN6-222ENST00000543744 HCLS1P14317 486 aaPredicted RBP20.99■□□□□ 0.95
PTPN6-222ENST00000543744 TTLL5Q6EMB2 1281 aa20.99■□□□□ 0.95
PTPN6-222ENST00000543744 NAP1L5Q96NT1 182 aaPredicted RBP20.99■□□□□ 0.95
PTPN6-222ENST00000543744 IL6STP40189 918 aaPredicted RBP20.99■□□□□ 0.95
PTPN6-222ENST00000543744 DZIP3Q86Y13 1208 aaKnown RBP20.99■□□□□ 0.95
PTPN6-222ENST00000543744 NSUN7Q8NE18 718 aaKnown RBP20.99■□□□□ 0.95
PTPN6-222ENST00000543744 APPBP2Q92624 585 aa20.99■□□□□ 0.95
PTPN6-222ENST00000543744 FUCA2Q9BTY2 467 aa20.99■□□□□ 0.95
PTPN6-222ENST00000543744 ZSCAN16Q9H4T2 348 aaPredicted RBP20.99■□□□□ 0.95
PTPN6-222ENST00000543744 HMGN5P82970 282 aaKnown RBP20.98■□□□□ 0.95
PTPN6-222ENST00000543744 RESTQ13127 1097 aa20.98■□□□□ 0.95
PTPN6-222ENST00000543744 IMMTQ16891 758 aaKnown RBP20.98■□□□□ 0.95
PTPN6-222ENST00000543744 LEO1Q8WVC0 666 aaPredicted RBP20.98■□□□□ 0.95
PTPN6-222ENST00000543744 TBC1D2BQ9UPU7 963 aa20.98■□□□□ 0.95
PTPN6-222ENST00000543744 KIF3AQ9Y496 699 aa20.98■□□□□ 0.95
PTPN6-222ENST00000543744 LAMA4Q16363 1823 aa20.98■□□□□ 0.95
PTPN6-222ENST00000543744 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.97■□□□□ 0.95
PTPN6-222ENST00000543744 PDE8AO60658 829 aa20.97■□□□□ 0.95
PTPN6-222ENST00000543744 PI16Q6UXB8 463 aa20.97■□□□□ 0.95
PTPN6-222ENST00000543744 CHMP4CQ96CF2 233 aa20.97■□□□□ 0.95
PTPN6-222ENST00000543744 ZNF274Q96GC6 653 aaPredicted RBP20.97■□□□□ 0.95
PTPN6-222ENST00000543744 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.97■□□□□ 0.95
PTPN6-222ENST00000543744 NAP1L2Q9ULW6 460 aaPredicted RBP20.97■□□□□ 0.95
PTPN6-222ENST00000543744 PLCH1Q4KWH8 1693 aa20.96■□□□□ 0.95
PTPN6-222ENST00000543744 PTPDC1A2A3K4 754 aa20.96■□□□□ 0.95
PTPN6-222ENST00000543744 CCT2P78371 535 aaKnown RBP20.96■□□□□ 0.95
PTPN6-222ENST00000543744 CHST3Q7LGC8 479 aa20.96■□□□□ 0.95
PTPN6-222ENST00000543744 ZNF512BQ96KM6 892 aaPredicted RBP20.96■□□□□ 0.95
PTPN6-222ENST00000543744 PUS7LQ9H0K6 701 aaKnown RBP20.96■□□□□ 0.95
PTPN6-222ENST00000543744 ZKSCAN5Q9Y2L8 839 aa20.96■□□□□ 0.95
PTPN6-222ENST00000543744 FOXP2O15409 715 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 CTDNEP1O95476 244 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 FGAP02671 866 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 LIG1P18858 919 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 PDIA3P30101 505 aaKnown RBP20.95■□□□□ 0.94
PTPN6-222ENST00000543744 MCM5P33992 734 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 MCAMP43121 646 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 NAA16Q6N069 864 aaPredicted RBP20.95■□□□□ 0.94
PTPN6-222ENST00000543744 FBXL16Q8N461 479 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 VGLL2Q8N8G2 317 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 NUP62CLQ9H1M0 184 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.95■□□□□ 0.94
PTPN6-222ENST00000543744 PTMAP06454 111 aaKnown RBP20.95■□□□□ 0.94
PTPN6-222ENST00000543744 ZSCAN25Q6NSZ9 544 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 CFAP45Q9UL16 551 aa20.95■□□□□ 0.94
PTPN6-222ENST00000543744 ANKRD36CQ5JPF3 1778 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 PDE8BO95263 885 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 CCDC192P0DO97 292 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 HAND2P61296 217 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 ZNF34Q8IZ26 560 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 USP25Q9UHP3 1055 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 KAT6BQ8WYB5 2073 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 GPAA1O43292 621 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 TTF1Q15361 905 aaPredicted RBP20.94■□□□□ 0.94
PTPN6-222ENST00000543744 MAP3K11Q16584 847 aa20.94■□□□□ 0.94
PTPN6-222ENST00000543744 CDCA7Q9BWT1 371 aaPredicted RBP20.94■□□□□ 0.94
PTPN6-222ENST00000543744 NCOA5Q9HCD5 579 aaKnown RBP20.94■□□□□ 0.94
PTPN6-222ENST00000543744 UBN2Q6ZU65 1347 aa20.93■□□□□ 0.94
PTPN6-222ENST00000543744 COL16A1Q07092 1604 aaPredicted RBP20.93■□□□□ 0.94
PTPN6-222ENST00000543744 DACT1Q9NYF0 836 aa20.93■□□□□ 0.94
PTPN6-222ENST00000543744 ZNF500O60304 480 aaPredicted RBP20.92■□□□□ 0.94
PTPN6-222ENST00000543744 EVCP57679 992 aa20.92■□□□□ 0.94
PTPN6-222ENST00000543744 DDX19AQ9NUU7 478 aaKnown RBP20.92■□□□□ 0.94
PTPN6-222ENST00000543744 ROBO1Q9Y6N7 1651 aa20.92■□□□□ 0.94
PTPN6-222ENST00000543744 COL22A1Q8NFW1 1626 aaPredicted RBP20.92■□□□□ 0.94
PTPN6-222ENST00000543744 CAMK4Q16566 473 aa20.92■□□□□ 0.94
PTPN6-222ENST00000543744 SLC9C2Q5TAH2 1124 aa20.92■□□□□ 0.94
PTPN6-222ENST00000543744 AK7Q96M32 723 aa20.92■□□□□ 0.94
PTPN6-222ENST00000543744 SALL1Q9NSC2 1324 aa20.91■□□□□ 0.94
PTPN6-222ENST00000543744 NUP98P52948 1817 aa20.91■□□□□ 0.94
PTPN6-222ENST00000543744 ZNF213O14771 459 aa20.91■□□□□ 0.94
PTPN6-222ENST00000543744 KDM4AO75164 1064 aa20.91■□□□□ 0.94
PTPN6-222ENST00000543744 ADD2P35612 726 aa20.91■□□□□ 0.94
PTPN6-222ENST00000543744 TNMDQ9H2S6 317 aa20.91■□□□□ 0.94
PTPN6-222ENST00000543744 MYH3P11055 1940 aa20.91■□□□□ 0.94
PTPN6-222ENST00000543744 ADCY5O95622 1261 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 FOSBP53539 338 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 EIF5P55010 431 aaKnown RBP20.9■□□□□ 0.94
PTPN6-222ENST00000543744 CCDC102BQ68D86 513 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 NCOA7Q8NI08 942 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 BICD2Q8TD16 824 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 PGBD1Q96JS3 809 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 MROH5Q6ZUA9 1318 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 AHDC1Q5TGY3 1603 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms