RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	PSMA5	P28066	241 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	RNF20	Q5VTR2	975 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	PRPF40B	Q6NWY9	871 aa	Known RBP	13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	KIF6	Q6ZMV9	814 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	BICDL1	Q6ZP65	573 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	ATG9A	Q7Z3C6	839 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	FAM227B	Q96M60	508 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	PLA2G12B	Q9BX93	195 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	ZBTB3	Q9H5J0	574 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	HMG20B	Q9P0W2	317 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	CYP46A1	Q9Y6A2	500 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	LAMB2	P55268	1798 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	EYA2	O00167	538 aa		13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	SLC27A2	O14975	620 aa		13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	TSGA10IP	Q3SY00	556 aa		13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	NOL8	Q76FK4	1167 aa	Known RBP	13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	RUFY3	Q7L099	469 aa		13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	JAKMIP1	Q96N16	626 aa	Known RBP	13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	DBNDD2	Q9BQY9	259 aa		13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	GRPEL1	Q9HAV7	217 aa		13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	PDRG1	Q9NUG6	133 aa		13.46	□□□□□ -0.25
LDHA-222	ENST00000543695	CDHR2	Q9BYE9	1310 aa		13.45	□□□□□ -0.26
LDHA-222	ENST00000543695		H0YIN7	160 aa		13.45	□□□□□ -0.26
LDHA-222	ENST00000543695	PCCA	P05165	728 aa	Predicted RBP	13.45	□□□□□ -0.26
LDHA-222	ENST00000543695	KCNJ4	P48050	445 aa		13.45	□□□□□ -0.26
LDHA-222	ENST00000543695	ZNF445	P59923	1031 aa		13.45	□□□□□ -0.26
LDHA-222	ENST00000543695	HSP90AB3P	Q58FF7	597 aa		13.45	□□□□□ -0.26
LDHA-222	ENST00000543695	CHMP3	Q9Y3E7	222 aa		13.45	□□□□□ -0.26
LDHA-222	ENST00000543695	MYH15	Q9Y2K3	1946 aa		13.45	□□□□□ -0.26
LDHA-222	ENST00000543695	MAP3K15	Q6ZN16	1313 aa		13.44	□□□□□ -0.26
LDHA-222	ENST00000543695	SH3TC1	Q8TE82	1336 aa		13.44	□□□□□ -0.26
LDHA-222	ENST00000543695	MBD3	O95983	291 aa		13.44	□□□□□ -0.26
LDHA-222	ENST00000543695	ADCK5	Q3MIX3	580 aa		13.44	□□□□□ -0.26
LDHA-222	ENST00000543695	C9orf131	Q5VYM1	1079 aa		13.44	□□□□□ -0.26
LDHA-222	ENST00000543695	TBC1D9B	Q66K14	1250 aa		13.44	□□□□□ -0.26
LDHA-222	ENST00000543695	SETDB2	Q96T68	719 aa		13.44	□□□□□ -0.26
LDHA-222	ENST00000543695	AKAP11	Q9UKA4	1901 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	NPHP1	O15259	732 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	TAF5L	O75529	589 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	PDIA4	P13667	645 aa	Known RBP	13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	KRT32	Q14532	448 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	ANKRD1	Q15327	319 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	DZIP3	Q86Y13	1208 aa	Known RBP	13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	C2CD5	Q86YS7	1000 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	TTLL6	Q8N841	843 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	KBTBD3	Q8NAB2	608 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695		U3KPZ7	1027 aa	Predicted RBP	13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	KIF13B	Q9NQT8	1826 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	ABCC12	Q96J65	1359 aa		13.43	□□□□□ -0.26
LDHA-222	ENST00000543695	PRPF40A	O75400	957 aa	Known RBP	13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	CAMTA2	O94983	1202 aa		13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	PDE6B	P35913	854 aa		13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	MCMDC2	Q4G0Z9	681 aa		13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	CLEC4G	Q6UXB4	293 aa		13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	BRIP1	Q9BX63	1249 aa		13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	HELLS	Q9NRZ9	838 aa		13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	SMC3	Q9UQE7	1217 aa		13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	BCOR	Q6W2J9	1755 aa		13.42	□□□□□ -0.26
LDHA-222	ENST00000543695	CSF1R	P07333	972 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	RPS6KB1	P23443	525 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	BLOC1S2	Q6QNY1	142 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	GAS2L3	Q86XJ1	694 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	TMEM87A	Q8NBN3	555 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	EDC3	Q96F86	508 aa	Known RBP	13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	DNAJC2	Q99543	621 aa	Known RBP	13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	CEP126	Q9P2H0	1117 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	AKAP2	Q9Y2D5	859 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	ZNF652	Q9Y2D9	606 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	CARMIL3	Q8ND23	1372 aa		13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	DDX60	Q8IY21	1712 aa	Known RBP	13.41	□□□□□ -0.26
LDHA-222	ENST00000543695	KIF3C	O14782	793 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	LARGE1	O95461	756 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	ZSCAN22	P10073	491 aa	Predicted RBP	13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	CPA1	P15085	419 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	CCDC57	Q2TAC2	916 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	LRRC24	Q50LG9	513 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	PRR5L	Q6MZQ0	368 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	CAVIN1	Q6NZI2	390 aa	Known RBP	13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	FAM43A	Q8N2R8	423 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	CNBD1	Q8NA66	436 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	GPT2	Q8TD30	523 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	NEUROD6	Q96NK8	337 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	PAG1	Q9NWQ8	432 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	RNF181	Q9P0P0	153 aa		13.4	□□□□□ -0.26
LDHA-222	ENST00000543695	DOCK2	Q92608	1830 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695		A0A1B0GUL7	405 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	ERVV-1	B6SEH8	477 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	STX6	O43752	255 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	NCL	P19338	710 aa	Known RBP	13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	ST5	P78524	1137 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	ZSCAN23	Q3MJ62	389 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	ZMYM1	Q5SVZ6	1142 aa		13.39	□□□□□ -0.27

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