RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 HSPD1P10809 573 aaKnown RBP16.51■□□□□ 0.23
MSH2-206ENST00000543555 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
MSH2-206ENST00000543555 POTEAQ6S8J7 498 aa16.51■□□□□ 0.23
MSH2-206ENST00000543555 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
MSH2-206ENST00000543555 TTLL11Q8NHH1 800 aa16.51■□□□□ 0.23
MSH2-206ENST00000543555 CDCA7Q9BWT1 371 aaPredicted RBP16.51■□□□□ 0.23
MSH2-206ENST00000543555 TSPY26PQ9H489 355 aa16.51■□□□□ 0.23
MSH2-206ENST00000543555 WNK3Q9BYP7 1800 aa16.5■□□□□ 0.23
MSH2-206ENST00000543555 CLCN1P35523 988 aa16.5■□□□□ 0.23
MSH2-206ENST00000543555 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
MSH2-206ENST00000543555 ANKRD36CQ5JPF3 1778 aa16.5■□□□□ 0.23
MSH2-206ENST00000543555 CCDC183Q5T5S1 534 aa16.5■□□□□ 0.23
MSH2-206ENST00000543555 ITGA6P23229 1130 aa16.49■□□□□ 0.23
MSH2-206ENST00000543555 CTSWP56202 376 aa16.49■□□□□ 0.23
MSH2-206ENST00000543555 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
MSH2-206ENST00000543555 GREM2Q9H772 168 aa16.49■□□□□ 0.23
MSH2-206ENST00000543555 RIPOR2Q9Y4F9 1068 aa16.49■□□□□ 0.23
MSH2-206ENST00000543555 M0R2C6 588 aa16.49■□□□□ 0.23
MSH2-206ENST00000543555 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
MSH2-206ENST00000543555 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
MSH2-206ENST00000543555 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 HSP90B1P14625 803 aaKnown RBP16.48■□□□□ 0.23
MSH2-206ENST00000543555 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
MSH2-206ENST00000543555 BRF1Q92994 677 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 PDLIM2Q96JY6 352 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 IRS4O14654 1257 aaPredicted RBP16.48■□□□□ 0.23
MSH2-206ENST00000543555 SCARF1Q14162 830 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 METTL24Q5JXM2 366 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 LDHAL6AQ6ZMR3 332 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 OSBP2Q969R2 916 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 TRMT112Q9UI30 125 aaKnown RBP16.48■□□□□ 0.23
MSH2-206ENST00000543555 ANKRD18BA2A2Z9 1011 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 ZFYP08048 801 aaPredicted RBP16.48■□□□□ 0.23
MSH2-206ENST00000543555 DZIP3Q86Y13 1208 aaKnown RBP16.48■□□□□ 0.23
MSH2-206ENST00000543555 LRRC2Q9BYS8 371 aa16.48■□□□□ 0.23
MSH2-206ENST00000543555 DOT1LQ8TEK3 1739 aa16.47■□□□□ 0.23
MSH2-206ENST00000543555 FGD1P98174 961 aa16.47■□□□□ 0.23
MSH2-206ENST00000543555 FERMT3Q86UX7 667 aa16.47■□□□□ 0.23
MSH2-206ENST00000543555 E7EWF7 191 aa16.47■□□□□ 0.23
MSH2-206ENST00000543555 JAK2O60674 1132 aa16.47■□□□□ 0.23
MSH2-206ENST00000543555 LETM1O95202 739 aaPredicted RBP16.47■□□□□ 0.23
MSH2-206ENST00000543555 KRT85P78386 507 aa16.47■□□□□ 0.23
MSH2-206ENST00000543555 RNF214Q8ND24 703 aa16.47■□□□□ 0.23
MSH2-206ENST00000543555 LAMA4Q16363 1823 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 ZAP70P43403 619 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
MSH2-206ENST00000543555 AGXT2Q9BYV1 514 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 TBC1D2BQ9UPU7 963 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 ATRNO75882 1429 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 TPRNQ4KMQ1 711 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 UBN2Q6ZU65 1347 aa16.46■□□□□ 0.23
MSH2-206ENST00000543555 PDE8AO60658 829 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 TRIM37O94972 964 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 SCRN1Q12765 414 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
MSH2-206ENST00000543555 NUP98P52948 1817 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 PFKFB2O60825 505 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 ZNF34Q8IZ26 560 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 ZNF772Q68DY9 489 aaPredicted RBP16.45■□□□□ 0.22
MSH2-206ENST00000543555 FAM173BQ6P4H8 233 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 TTC6Q86TZ1 520 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 VGLL2Q8N8G2 317 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 APPBP2Q92624 585 aa16.45■□□□□ 0.22
MSH2-206ENST00000543555 MYH3P11055 1940 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 ELP1O95163 1332 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 RXRBP28702 533 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 ATP6V1AP38606 617 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 SMARCC2Q8TAQ2 1214 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 LLPHQ9BRT6 129 aaKnown RBP16.44■□□□□ 0.22
MSH2-206ENST00000543555 FOXP2O15409 715 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 TTLL5Q6EMB2 1281 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 KRT27Q7Z3Y8 459 aa16.44■□□□□ 0.22
MSH2-206ENST00000543555 MCAMP43121 646 aa16.43■□□□□ 0.22
MSH2-206ENST00000543555 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
MSH2-206ENST00000543555 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
MSH2-206ENST00000543555 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
MSH2-206ENST00000543555 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
MSH2-206ENST00000543555 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
MSH2-206ENST00000543555 HS1BP3Q53T59 392 aa16.43■□□□□ 0.22
MSH2-206ENST00000543555 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
MSH2-206ENST00000543555 PDE8BO95263 885 aa16.43■□□□□ 0.22
MSH2-206ENST00000543555 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
MSH2-206ENST00000543555 ZSCAN30Q86W11 494 aa16.42■□□□□ 0.22
MSH2-206ENST00000543555 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
MSH2-206ENST00000543555 SCAND2PQ9GZW5 306 aaPredicted RBP16.42■□□□□ 0.22
MSH2-206ENST00000543555 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
MSH2-206ENST00000543555 LRP5O75197 1615 aa16.42■□□□□ 0.22
MSH2-206ENST00000543555 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
MSH2-206ENST00000543555 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
MSH2-206ENST00000543555 CCDC87Q9NVE4 849 aa16.42■□□□□ 0.22
MSH2-206ENST00000543555 ONECUT3O60422 494 aaPredicted RBP16.41■□□□□ 0.22
MSH2-206ENST00000543555 IMMTQ16891 758 aaKnown RBP16.41■□□□□ 0.22
MSH2-206ENST00000543555 AK7Q96M32 723 aa16.41■□□□□ 0.22
MSH2-206ENST00000543555 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.41■□□□□ 0.225e-9■■■■□ 20.5
MSH2-206ENST00000543555 LOC102724428A0A0B4J2F2 783 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms