RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 GDPD2Q9HCC8 539 aa24.45■■□□□ 1.5
ME3-212ENST00000543262 MCAMP43121 646 aa24.44■■□□□ 1.5
ME3-212ENST00000543262 ZNF445P59923 1031 aa24.44■■□□□ 1.5
ME3-212ENST00000543262 Q6ZUG5 572 aa24.44■■□□□ 1.5
ME3-212ENST00000543262 BCL9LQ86UU0 1499 aa24.44■■□□□ 1.5
ME3-212ENST00000543262 MBD3O95983 291 aa24.44■■□□□ 1.5
ME3-212ENST00000543262 WASHC4Q2M389 1173 aa24.44■■□□□ 1.5
ME3-212ENST00000543262 PARP10Q53GL7 1025 aa24.44■■□□□ 1.5
ME3-212ENST00000543262 MTMR6Q9Y217 621 aa24.44■■□□□ 1.5
ME3-212ENST00000543262 MYH7P12883 1935 aa24.43■■□□□ 1.5
ME3-212ENST00000543262 A0A0G2JLW4 131 aa24.43■■□□□ 1.5
ME3-212ENST00000543262 STK3Q13188 491 aa24.43■■□□□ 1.5
ME3-212ENST00000543262 VPS72Q15906 364 aa24.43■■□□□ 1.5
ME3-212ENST00000543262 USP48Q86UV5 1035 aa24.43■■□□□ 1.5
ME3-212ENST00000543262 NIP7Q9Y221 180 aaKnown RBP eCLIP24.43■■□□□ 1.5
ME3-212ENST00000543262 COL5A3P25940 1745 aaPredicted RBP24.43■■□□□ 1.5
ME3-212ENST00000543262 ZNF512BQ96KM6 892 aaPredicted RBP24.43■■□□□ 1.5
ME3-212ENST00000543262 HELBQ8NG08 1087 aaPredicted RBP24.42■■□□□ 1.5
ME3-212ENST00000543262 DDX60Q8IY21 1712 aaKnown RBP24.42■■□□□ 1.5
ME3-212ENST00000543262 MROH5Q6ZUA9 1318 aa24.42■■□□□ 1.5
ME3-212ENST00000543262 HMGB1P09429 215 aaKnown RBP24.41■■□□□ 1.5
ME3-212ENST00000543262 TMEM63CQ9P1W3 806 aa24.41■■□□□ 1.5
ME3-212ENST00000543262 LRP5O75197 1615 aa24.41■■□□□ 1.5
ME3-212ENST00000543262 CNPY2Q9Y2B0 182 aa24.41■■□□□ 1.5
ME3-212ENST00000543262 NTSR2O95665 410 aa24.4■■□□□ 1.5
ME3-212ENST00000543262 LARP1BQ659C4 914 aaKnown RBP24.4■■□□□ 1.5
ME3-212ENST00000543262 DHX32Q7L7V1 743 aaKnown RBP24.4■■□□□ 1.5
ME3-212ENST00000543262 LRRC2Q9BYS8 371 aa24.4■■□□□ 1.5
ME3-212ENST00000543262 SEC31BQ9NQW1 1179 aa24.4■■□□□ 1.5
ME3-212ENST00000543262 ATP6V1DQ9Y5K8 247 aa24.4■■□□□ 1.5
ME3-212ENST00000543262 GADD45BO75293 160 aaPredicted RBP24.4■■□□□ 1.5
ME3-212ENST00000543262 PUM3Q15397 648 aaKnown RBP24.4■■□□□ 1.5
ME3-212ENST00000543262 APPBP2Q92624 585 aa24.4■■□□□ 1.5
ME3-212ENST00000543262 VPS37CA5D8V6 355 aaPredicted RBP24.39■■□□□ 1.5
ME3-212ENST00000543262 E7EWF7 191 aa24.39■■□□□ 1.5
ME3-212ENST00000543262 CCDC102BQ68D86 513 aa24.39■■□□□ 1.5
ME3-212ENST00000543262 TTLL5Q6EMB2 1281 aa24.39■■□□□ 1.5
ME3-212ENST00000543262 LINC00116Q8NCU8 138 aa24.39■■□□□ 1.5
ME3-212ENST00000543262 PUS7LQ9H0K6 701 aaKnown RBP24.39■■□□□ 1.5
ME3-212ENST00000543262 FGFR2P21802 821 aa24.39■■□□□ 1.49
ME3-212ENST00000543262 PHKA1P46020 1223 aa24.39■■□□□ 1.49
ME3-212ENST00000543262 TMEM87AQ8NBN3 555 aa24.39■■□□□ 1.49
ME3-212ENST00000543262 LPIN2Q92539 896 aa24.39■■□□□ 1.49
ME3-212ENST00000543262 FOXP2O15409 715 aa24.38■■□□□ 1.49
ME3-212ENST00000543262 KCNQ4P56696 695 aa24.38■■□□□ 1.49
ME3-212ENST00000543262 BRF1Q92994 677 aa24.38■■□□□ 1.49
ME3-212ENST00000543262 GTF3C6Q969F1 213 aa24.38■■□□□ 1.49
ME3-212ENST00000543262 MPHOSPH8Q99549 860 aa24.38■■□□□ 1.49
ME3-212ENST00000543262 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.38■■□□□ 1.49
ME3-212ENST00000543262 ZNF831Q5JPB2 1677 aa24.38■■□□□ 1.49
ME3-212ENST00000543262 MYO5AQ9Y4I1 1855 aaKnown RBP24.38■■□□□ 1.49
ME3-212ENST00000543262 HSP90B1P14625 803 aaKnown RBP24.38■■□□□ 1.49
ME3-212ENST00000543262 FGD1P98174 961 aa24.38■■□□□ 1.49
ME3-212ENST00000543262 EXOSC10Q01780 885 aaKnown RBP24.37■■□□□ 1.49
ME3-212ENST00000543262 CCDC152Q4G0S7 254 aa24.37■■□□□ 1.49
ME3-212ENST00000543262 ZNF652Q9Y2D9 606 aa24.37■■□□□ 1.49
ME3-212ENST00000543262 PDCP20941 246 aa24.36■■□□□ 1.49
ME3-212ENST00000543262 ARID4AP29374 1257 aaPredicted RBP24.36■■□□□ 1.49
ME3-212ENST00000543262 TTF1Q15361 905 aaPredicted RBP24.36■■□□□ 1.49
ME3-212ENST00000543262 BCORQ6W2J9 1755 aa24.36■■□□□ 1.49
ME3-212ENST00000543262 ARAP2Q8WZ64 1704 aa24.36■■□□□ 1.49
ME3-212ENST00000543262 PDIA4P13667 645 aaKnown RBP24.36■■□□□ 1.49
ME3-212ENST00000543262 PTF1AQ7RTS3 328 aa24.36■■□□□ 1.49
ME3-212ENST00000543262 PIH1D3Q9NQM4 214 aaKnown RBP24.36■■□□□ 1.49
ME3-212ENST00000543262 CTNNA3Q9UI47 895 aa24.36■■□□□ 1.49
ME3-212ENST00000543262 LAMB2P55268 1798 aa24.36■■□□□ 1.49
ME3-212ENST00000543262 UQCRFS1P1P0C7P4 283 aa24.35■■□□□ 1.49
ME3-212ENST00000543262 FNBP4Q8N3X1 1017 aaPredicted RBP24.35■■□□□ 1.49
ME3-212ENST00000543262 ADD2P35612 726 aa24.35■■□□□ 1.49
ME3-212ENST00000543262 SLC9C2Q5TAH2 1124 aa24.35■■□□□ 1.49
ME3-212ENST00000543262 ZSCAN25Q6NSZ9 544 aa24.35■■□□□ 1.49
ME3-212ENST00000543262 SNAP23O00161 211 aa24.34■■□□□ 1.49
ME3-212ENST00000543262 FGAP02671 866 aa24.34■■□□□ 1.49
ME3-212ENST00000543262 SLC5A1P13866 664 aa24.34■■□□□ 1.49
ME3-212ENST00000543262 DNM1Q05193 864 aaKnown RBP24.34■■□□□ 1.49
ME3-212ENST00000543262 CLEC4GQ6UXB4 293 aa24.34■■□□□ 1.49
ME3-212ENST00000543262 GPAA1O43292 621 aa24.34■■□□□ 1.49
ME3-212ENST00000543262 RTN4Q9NQC3 1192 aaKnown RBP24.34■■□□□ 1.49
ME3-212ENST00000543262 RTL9Q8NET4 1388 aa24.34■■□□□ 1.49
ME3-212ENST00000543262 SYCE3A1L190 88 aa24.33■■□□□ 1.49
ME3-212ENST00000543262 CDC37L1Q7L3B6 337 aa24.33■■□□□ 1.49
ME3-212ENST00000543262 AGXT2Q9BYV1 514 aa24.33■■□□□ 1.49
ME3-212ENST00000543262 FIBPO43427 364 aa24.33■■□□□ 1.48
ME3-212ENST00000543262 JAK2O60674 1132 aa24.33■■□□□ 1.48
ME3-212ENST00000543262 IDH1O75874 414 aaKnown RBP24.33■■□□□ 1.48
ME3-212ENST00000543262 IGHMBP2P38935 993 aaKnown RBP24.33■■□□□ 1.48
ME3-212ENST00000543262 IMMTQ16891 758 aaKnown RBP24.33■■□□□ 1.48
ME3-212ENST00000543262 HAND2P61296 217 aa24.32■■□□□ 1.48
ME3-212ENST00000543262 APOBRQ0VD83 1088 aa24.32■■□□□ 1.48
ME3-212ENST00000543262 SCRN1Q12765 414 aa24.32■■□□□ 1.48
ME3-212ENST00000543262 CHST3Q7LGC8 479 aa24.32■■□□□ 1.48
ME3-212ENST00000543262 PFKFB2O60825 505 aa24.32■■□□□ 1.48
ME3-212ENST00000543262 USP21Q9UK80 565 aa24.32■■□□□ 1.48
ME3-212ENST00000543262 NASPP49321 788 aaPredicted RBP24.31■■□□□ 1.48
ME3-212ENST00000543262 FERMT3Q86UX7 667 aa24.31■■□□□ 1.48
ME3-212ENST00000543262 UBE3CQ15386 1083 aa24.3■■□□□ 1.48
ME3-212ENST00000543262 LRSAM1Q6UWE0 723 aa24.3■■□□□ 1.48
ME3-212ENST00000543262 SPATA5Q8NB90 893 aa24.3■■□□□ 1.48
ME3-212ENST00000543262 SYAP1Q96A49 352 aaPredicted RBP24.3■■□□□ 1.48
ME3-212ENST00000543262 CNTNAP4Q9C0A0 1308 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms