RNA–Protein interactions for RNA: ENST00000542832.1

DDX47-208, Transcript of DEAD-box helicase 47, human

TSL 5

Gene DDX47, Length 554 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX47-208	ENST00000542832	MPHOSPH8	Q99549	860 aa		10.85	□□□□□ -0.67
DDX47-208	ENST00000542832	PCDHGA4	Q9Y5G9	962 aa		10.85	□□□□□ -0.67
DDX47-208	ENST00000542832	SCN7A	Q01118	1682 aa		10.85	□□□□□ -0.67
DDX47-208	ENST00000542832	QSER1	Q2KHR3	1735 aa		10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	AFDN	P55196	1824 aa	Known RBP	10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	ERC2	O15083	957 aa		10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	SASH1	O94885	1247 aa		10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	NUDT7	P0C024	238 aa		10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	HCLS1	P14317	486 aa	Predicted RBP	10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	RPS8	P62241	208 aa	Known RBP	10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	RTL5	Q5HYW3	569 aa	Predicted RBP	10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	DDX46	Q7L014	1031 aa	Known RBP	10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	ATG9A	Q7Z3C6	839 aa		10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	GPATCH3	Q96I76	525 aa		10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	GREM2	Q9H772	168 aa		10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	EXOC6B	Q9Y2D4	811 aa		10.84	□□□□□ -0.67
DDX47-208	ENST00000542832	PTGER2	P43116	358 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	BMP2KL	Q5H9B9	411 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	NUTM1	Q86Y26	1132 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	ANKRD18A	Q8IVF6	992 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	PLEKHM2	Q8IWE5	1019 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	SYNE4	Q8N205	404 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	JARID2	Q92833	1246 aa	Predicted RBP	10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	RBM17	Q96I25	401 aa	Known RBP	10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	LNPK	Q9C0E8	428 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	ANKRD2	Q9GZV1	360 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	CHMP3	Q9Y3E7	222 aa		10.83	□□□□□ -0.68
DDX47-208	ENST00000542832	PDE8B	O95263	885 aa		10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	MMP10	P09238	476 aa		10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	IFIT2	P09913	472 aa	Known RBP	10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	PDE1A	P54750	535 aa		10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	FAM161A	Q3B820	660 aa		10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	SMIM5	Q71RC9	77 aa		10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	MTFR1L	Q9H019	292 aa		10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	CNNM1	Q9NRU3	951 aa		10.82	□□□□□ -0.68
DDX47-208	ENST00000542832	FAM177B	A6PVY3	158 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	GLRX3	O76003	335 aa	Known RBP	10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	NPR1	P16066	1061 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	MX1	P20591	662 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	DDR1	Q08345	913 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	GRAP	Q13588	217 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	UBE4A	Q14139	1066 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	CC2D2B	Q6DHV5	1058 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	HS6ST3	Q8IZP7	471 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	GRAPL	Q8TC17	118 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	LHX6	Q9UPM6	363 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	PA2G4	Q9UQ80	394 aa	Known RBP	10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	SALL3	Q9BXA9	1300 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	C4A	P0C0L4	1744 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	COL24A1	Q17RW2	1714 aa		10.81	□□□□□ -0.68
DDX47-208	ENST00000542832	SRGN	P10124	158 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	POLD1	P28340	1107 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	TGFB2	P61812	414 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	TNNI3K	Q59H18	835 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	STYK1	Q6J9G0	422 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	LPIN2	Q92539	896 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	RPGR	Q92834	1020 aa	Known RBP	10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	EAF2	Q96CJ1	260 aa	Predicted RBP	10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	MASTL	Q96GX5	879 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	TMX4	Q9H1E5	349 aa	Predicted RBP	10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	ECHDC1	Q9NTX5	307 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	LEMD3	Q9Y2U8	911 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832	FPGT-TNNI3K	V9GXZ4	949 aa		10.8	□□□□□ -0.68
DDX47-208	ENST00000542832		H0YIN7	160 aa		10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	ATP5J	P18859	108 aa		10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	PDE4A	P27815	886 aa		10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	LSM11	P83369	360 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	TFCP2	Q12800	502 aa		10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	PUM3	Q15397	648 aa	Known RBP	10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	CCDC158	Q5M9N0	1113 aa		10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	TMED8	Q6PL24	325 aa	Predicted RBP	10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	SP8	Q8IXZ3	490 aa		10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	VGLL2	Q8N8G2	317 aa		10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	CNKSR1	Q969H4	720 aa		10.79	□□□□□ -0.68
DDX47-208	ENST00000542832	ABCC12	Q96J65	1359 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	MYH3	P11055	1940 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	EPB41L2	O43491	1005 aa	Known RBP	10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	IFIT1	P09914	478 aa	Known RBP	10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	FGFR2	P21802	821 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	RGS3	P49796	1198 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	LRRC24	Q50LG9	513 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	METTL24	Q5JXM2	366 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	C15orf52	Q6ZUT6	534 aa	Known RBP	10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	AACS	Q86V21	672 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	KLHDC4	Q8TBB5	520 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	ZNF594	Q96JF6	807 aa	Predicted RBP	10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	SIL1	Q9H173	461 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	SEC31B	Q9NQW1	1179 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	PODXL2	Q9NZ53	605 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	MINPP1	Q9UNW1	487 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832	NRXN2	Q9P2S2	1712 aa		10.78	□□□□□ -0.68
DDX47-208	ENST00000542832		A0A1B0GUL7	405 aa		10.77	□□□□□ -0.69
DDX47-208	ENST00000542832	PBX2	P40425	430 aa		10.77	□□□□□ -0.69
DDX47-208	ENST00000542832	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.77	□□□□□ -0.69
DDX47-208	ENST00000542832	TTC22	Q5TAA0	569 aa		10.77	□□□□□ -0.69
DDX47-208	ENST00000542832	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.77	□□□□□ -0.69
DDX47-208	ENST00000542832	IL27	Q8NEV9	243 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms