RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 CCDC102BQ68D86 513 aa9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 OLFM4Q6UX06 510 aa9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 RTKN2Q8IZC4 609 aa9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 TBC1D16Q8TBP0 767 aa9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 PI4K2BQ8TCG2 481 aa9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 EYA3Q99504 573 aa9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 FHDC1Q9C0D6 1143 aaPredicted RBP9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 BOLA2Q9H3K6 86 aa9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 TNRC6CQ9HCJ0 1690 aaKnown RBP9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 ZNF609O15014 1411 aa9.79□□□□□ -0.84
MRPL40P1-201ENST00000542687 WTIPA6NIX2 430 aaPredicted RBP9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 TRIM6-TRIM34B2RNG4 842 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 HIBADHP31937 336 aaKnown RBP9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 GYG1P46976 350 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 BCAMP50895 628 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 CCDC93Q567U6 631 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 BMP2KLQ5H9B9 411 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 C15orf52Q6ZUT6 534 aaKnown RBP9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 FBXO33Q7Z6M2 555 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 SUPT20HQ8NEM7 779 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 NLGN2Q8NFZ4 835 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 ZNF512BQ96KM6 892 aaPredicted RBP9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 FAM84BQ96KN1 310 aaPredicted RBP9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 ZC3H12CQ9C0D7 883 aaKnown RBP9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 POLLQ9UGP5 575 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 LAMB2P55268 1798 aa9.78□□□□□ -0.84
MRPL40P1-201ENST00000542687 FRAT2O75474 233 aaPredicted RBP9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 MAP4K4O95819 1239 aaPredicted RBP9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 GSPT1P15170 499 aaKnown RBP9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 KLRK1P26718 216 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 PHKA1P46020 1223 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 FKBP4Q02790 459 aaKnown RBP eCLIP9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 WASHC4Q2M389 1173 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 ZNF804AQ7Z570 1209 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 SLC51AQ86UW1 340 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 CNTROBQ8N137 903 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 RILPL2Q969X0 211 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 DNAJC2Q99543 621 aaKnown RBP9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 HAUS7Q99871 368 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 SYT17Q9BSW7 474 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 WWC3Q9ULE0 1092 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 BCS1LQ9Y276 419 aa9.77□□□□□ -0.85
MRPL40P1-201ENST00000542687 G3V3G9 751 aa9.76□□□□□ -0.85
MRPL40P1-201ENST00000542687 RIMBP2O15034 1052 aa9.76□□□□□ -0.85
MRPL40P1-201ENST00000542687 SDSP20132 328 aa9.76□□□□□ -0.85
MRPL40P1-201ENST00000542687 ARID4AP29374 1257 aaPredicted RBP9.76□□□□□ -0.85
MRPL40P1-201ENST00000542687 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
MRPL40P1-201ENST00000542687 EVI5LQ96CN4 794 aa9.76□□□□□ -0.85
MRPL40P1-201ENST00000542687 GPR101Q96P66 508 aaPredicted RBP9.76□□□□□ -0.85
MRPL40P1-201ENST00000542687 RTFDC1Q9BY42 306 aaPredicted RBP9.76□□□□□ -0.85
MRPL40P1-201ENST00000542687 COL4A1P02462 1669 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 SEMA3EO15041 775 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 MCAMP43121 646 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 CASC1Q6TDU7 716 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 TXNRD3Q86VQ6 643 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 SPATA5Q8NB90 893 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 PSMD1Q99460 953 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 COA1Q9GZY4 146 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 PAG1Q9NWQ8 432 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 DENND2AQ9ULE3 1009 aa9.75□□□□□ -0.85
MRPL40P1-201ENST00000542687 GOLGB1Q14789 3259 aaKnown RBP9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 GOLIM4O00461 696 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 ZAP70P43403 619 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 RASGRF1Q13972 1273 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 SCARF1Q14162 830 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 TTF1Q15361 905 aaPredicted RBP9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 FSD1Q9BTV5 496 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 VPS33BQ9H267 617 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 CD209Q9NNX6 404 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 HMG20BQ9P0W2 317 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 IQSEC3Q9UPP2 1182 aaPredicted RBP9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 IRS2Q9Y4H2 1338 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 MYH3P11055 1940 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 MED23Q9ULK4 1368 aa9.74□□□□□ -0.85
MRPL40P1-201ENST00000542687 ANKRD31Q8N7Z5 1873 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 HIP1O00291 1037 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 ZBTB22O15209 634 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 PPIP5K2O43314 1243 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 CDC45O75419 566 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 IL1R1P14778 569 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 KIAA2012Q0VF49 1180 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 CHAF1AQ13111 956 aaPredicted RBP9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 DOK7Q18PE1 504 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 LRRFIP1Q32MZ4 808 aaKnown RBP9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 PI16Q6UXB8 463 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 PODNQ7Z5L7 613 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 TICAM2Q86XR7 235 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 TDRD7Q8NHU6 1098 aaKnown RBP9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 EDC3Q96F86 508 aaKnown RBP9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 TAOK3Q9H2K8 898 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 NDUFB9Q9Y6M9 179 aa9.73□□□□□ -0.85
MRPL40P1-201ENST00000542687 EIF5BO60841 1220 aaKnown RBP9.72□□□□□ -0.85
MRPL40P1-201ENST00000542687 CYP2E1P05181 493 aaPredicted RBP9.72□□□□□ -0.85
MRPL40P1-201ENST00000542687 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
MRPL40P1-201ENST00000542687 ZGPATQ8N5A5 531 aaKnown RBP9.72□□□□□ -0.85
MRPL40P1-201ENST00000542687 KBTBD3Q8NAB2 608 aa9.72□□□□□ -0.85
MRPL40P1-201ENST00000542687 WDR66Q8TBY9 1149 aa9.72□□□□□ -0.85
MRPL40P1-201ENST00000542687 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms