RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 ZNF592Q92610 1267 aa11.89□□□□□ -0.51
TOP3A-208ENST00000542570 TNMDQ9H2S6 317 aa11.89□□□□□ -0.51
TOP3A-208ENST00000542570 ZNF532Q9HCE3 1301 aa11.89□□□□□ -0.51
TOP3A-208ENST00000542570 CMTR1Q8N1G2 835 aaKnown RBP11.88□□□□□ -0.51
TOP3A-208ENST00000542570 NYXQ9GZU5 481 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
TOP3A-208ENST00000542570 MCM5P33992 734 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 METAP2P50579 478 aaKnown RBP eCLIP11.88□□□□□ -0.51
TOP3A-208ENST00000542570 PARP10Q53GL7 1025 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 CCDC102BQ68D86 513 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 MAGEB6P1A0A0J9YX57 407 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-208ENST00000542570 PCCAP05165 728 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-208ENST00000542570 SSBP05455 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
TOP3A-208ENST00000542570 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 TRIM5Q9C035 493 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 ZHX3Q9H4I2 956 aa11.88□□□□□ -0.51
TOP3A-208ENST00000542570 IARSP41252 1262 aaKnown RBP11.87□□□□□ -0.51
TOP3A-208ENST00000542570 CCDC96Q2M329 555 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 UIMC1Q96RL1 719 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 RICTORQ6R327 1708 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 CRB1P82279 1406 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 MBD3O95983 291 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 TPM4P67936 248 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 CHRNDQ07001 517 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 JAK2O60674 1132 aa11.87□□□□□ -0.51
TOP3A-208ENST00000542570 IL6STP40189 918 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-208ENST00000542570 CTCFLQ8NI51 663 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-208ENST00000542570 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-208ENST00000542570 MARCKSP29966 332 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-208ENST00000542570 TCP10Q12799 353 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 LPIN2Q92539 896 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 VEZTQ9HBM0 779 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 ADCY9O60503 1353 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-208ENST00000542570 RBM25P49756 843 aaKnown RBP11.86□□□□□ -0.51
TOP3A-208ENST00000542570 GIMAP6Q6P9H5 292 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 SPATA5Q8NB90 893 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-208ENST00000542570 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 TCEAL9Q9UHQ7 104 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 LDHBP07195 334 aaKnown RBP11.86□□□□□ -0.51
TOP3A-208ENST00000542570 WTAPQ15007 396 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-208ENST00000542570 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
TOP3A-208ENST00000542570 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-208ENST00000542570 CYP19A1P11511 503 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-208ENST00000542570 ATP5JP18859 108 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 SYT1P21579 422 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 HSP90AA4PQ58FG1 418 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 RUFY3Q7L099 469 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 IQGAP1P46940 1657 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 ZBTB43O43298 467 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 BAG3O95817 575 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 MRE11P49959 708 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 CRNKL1Q9BZJ0 848 aaKnown RBP11.85□□□□□ -0.51
TOP3A-208ENST00000542570 TSPY26PQ9H489 355 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 PDE8BO95263 885 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 GTF2IP78347 998 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 TMOD2Q9NZR1 351 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 DEPDC5O75140 1603 aa11.85□□□□□ -0.51
TOP3A-208ENST00000542570 HMGB1P09429 215 aaKnown RBP11.84□□□□□ -0.51
TOP3A-208ENST00000542570 SCNN1DP51172 638 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 SOGA3Q5TF21 947 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 DHX32Q7L7V1 743 aaKnown RBP11.84□□□□□ -0.51
TOP3A-208ENST00000542570 USP48Q86UV5 1035 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 PHKBQ93100 1093 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 MYO5BQ9ULV0 1848 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 FAM47AQ5JRC9 791 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 KLHL10Q6JEL2 608 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 PTF1AQ7RTS3 328 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 CATIPQ7Z7H3 387 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 GPHNQ9NQX3 736 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-208ENST00000542570 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
TOP3A-208ENST00000542570 ZC3H13Q5T200 1668 aaKnown RBP11.83□□□□□ -0.51
TOP3A-208ENST00000542570 TECPR2O15040 1411 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 PRKAB2O43741 272 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 NLRP5P59047 1200 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 APPBP2Q92624 585 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 NUP62CLQ9H1M0 184 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-208ENST00000542570 RAD50Q92878 1312 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 CDKL5O76039 1030 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 TSPY3P0CV98 308 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 TSPY8P0CW00 308 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-208ENST00000542570 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
TOP3A-208ENST00000542570 IFIT1BQ5T764 474 aaKnown RBP11.83□□□□□ -0.52
TOP3A-208ENST00000542570 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 ALG1Q9BT22 464 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 RNF41Q9H4P4 317 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms