RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 CHRNDQ07001 517 aa25.59■■□□□ 1.69
DDB1-220ENST00000542337 LMBR1LQ6UX01 489 aa25.59■■□□□ 1.69
DDB1-220ENST00000542337 SULF1Q8IWU6 871 aa25.59■■□□□ 1.69
DDB1-220ENST00000542337 TNS4Q8IZW8 715 aa25.59■■□□□ 1.69
DDB1-220ENST00000542337 CTCFP49711 727 aaPredicted RBP25.58■■□□□ 1.69
DDB1-220ENST00000542337 CYP4F22Q6NT55 531 aa25.58■■□□□ 1.69
DDB1-220ENST00000542337 SAPCD2Q86UD0 394 aa25.58■■□□□ 1.69
DDB1-220ENST00000542337 WBP1LQ9NX94 342 aa25.58■■□□□ 1.69
DDB1-220ENST00000542337 ZNF609O15014 1411 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 CCER2I3L3R5 266 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 FOXN1O15353 648 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 SLFN5Q08AF3 891 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 STRIP1Q5VSL9 837 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 OGFOD1Q8N543 542 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 MRPL50Q8N5N7 158 aaKnown RBP25.57■■□□□ 1.68
DDB1-220ENST00000542337 HHIPL1Q96JK4 782 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 BEGAINQ9BUH8 593 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 PTPRCP08575 1304 aa25.57■■□□□ 1.68
DDB1-220ENST00000542337 GMLQ99445 158 aa25.56■■□□□ 1.68
DDB1-220ENST00000542337 MYOZ2Q9NPC6 264 aa25.56■■□□□ 1.68
DDB1-220ENST00000542337 MYO3BQ8WXR4 1341 aa25.56■■□□□ 1.68
DDB1-220ENST00000542337 MMP14P50281 582 aa25.55■■□□□ 1.68
DDB1-220ENST00000542337 SCARF1Q14162 830 aa25.55■■□□□ 1.68
DDB1-220ENST00000542337 LDHAL6AQ6ZMR3 332 aa25.55■■□□□ 1.68
DDB1-220ENST00000542337 C2orf69Q8N8R5 385 aa25.55■■□□□ 1.68
DDB1-220ENST00000542337 CNNM1Q9NRU3 951 aa25.55■■□□□ 1.68
DDB1-220ENST00000542337 GGA3Q9NZ52 723 aa25.55■■□□□ 1.68
DDB1-220ENST00000542337 TRPM7Q96QT4 1865 aa25.54■■□□□ 1.68
DDB1-220ENST00000542337 MAP2K2P36507 400 aa25.54■■□□□ 1.68
DDB1-220ENST00000542337 DACT2Q5SW24 774 aa25.54■■□□□ 1.68
DDB1-220ENST00000542337 TTLL5Q6EMB2 1281 aa25.54■■□□□ 1.68
DDB1-220ENST00000542337 TXNRD3Q86VQ6 643 aa25.54■■□□□ 1.68
DDB1-220ENST00000542337 ADM5C9JUS6 153 aa25.53■■□□□ 1.68
DDB1-220ENST00000542337 EPHA10Q5JZY3 1008 aa25.53■■□□□ 1.68
DDB1-220ENST00000542337 PRDM10Q9NQV6 1147 aa25.53■■□□□ 1.68
DDB1-220ENST00000542337 TAF5LO75529 589 aa25.52■■□□□ 1.68
DDB1-220ENST00000542337 HUNKP57058 714 aa25.52■■□□□ 1.68
DDB1-220ENST00000542337 ANGEL2Q5VTE6 544 aaKnown RBP25.52■■□□□ 1.68
DDB1-220ENST00000542337 HELBQ8NG08 1087 aaPredicted RBP25.52■■□□□ 1.68
DDB1-220ENST00000542337 SSH1Q8WYL5 1049 aa25.52■■□□□ 1.68
DDB1-220ENST00000542337 SCN9AQ15858 1988 aa25.52■■□□□ 1.68
DDB1-220ENST00000542337 ALDH1L2Q3SY69 923 aa25.51■■□□□ 1.67
DDB1-220ENST00000542337 GBA2Q9HCG7 927 aaPredicted RBP25.51■■□□□ 1.67
DDB1-220ENST00000542337 HDAC9Q9UKV0 1011 aa25.51■■□□□ 1.67
DDB1-220ENST00000542337 PLIN1O60240 522 aa25.5■■□□□ 1.67
DDB1-220ENST00000542337 KLRK1P26718 216 aa25.5■■□□□ 1.67
DDB1-220ENST00000542337 GTF2IP78347 998 aa25.5■■□□□ 1.67
DDB1-220ENST00000542337 ZNF804AQ7Z570 1209 aa25.5■■□□□ 1.67
DDB1-220ENST00000542337 CDCA7LQ96GN5 454 aa25.5■■□□□ 1.67
DDB1-220ENST00000542337 ZNF594Q96JF6 807 aaPredicted RBP25.5■■□□□ 1.67
DDB1-220ENST00000542337 MXD3Q9BW11 206 aa25.5■■□□□ 1.67
DDB1-220ENST00000542337 SPEF2Q9C093 1822 aa25.5■■□□□ 1.67
DDB1-220ENST00000542337 CD209Q9NNX6 404 aa25.5■■□□□ 1.67
DDB1-220ENST00000542337 NBPF7P0C2Y1 421 aaPredicted RBP25.49■■□□□ 1.67
DDB1-220ENST00000542337 DLK2Q6UY11 383 aa25.49■■□□□ 1.67
DDB1-220ENST00000542337 C15orf52Q6ZUT6 534 aaKnown RBP25.49■■□□□ 1.67
DDB1-220ENST00000542337 SUCLG2Q96I99 432 aa25.49■■□□□ 1.67
DDB1-220ENST00000542337 UTYO14607 1347 aa25.48■■□□□ 1.67
DDB1-220ENST00000542337 ASTN2O75129 1339 aaPredicted RBP25.48■■□□□ 1.67
DDB1-220ENST00000542337 PITPNM2Q9BZ72 1349 aa25.48■■□□□ 1.67
DDB1-220ENST00000542337 AOC2O75106 756 aa25.48■■□□□ 1.67
DDB1-220ENST00000542337 SMC4Q9NTJ3 1288 aa25.48■■□□□ 1.67
DDB1-220ENST00000542337 CT47B1P0C2W7 299 aaPredicted RBP25.47■■□□□ 1.67
DDB1-220ENST00000542337 LBX1P52954 281 aa25.47■■□□□ 1.67
DDB1-220ENST00000542337 CDCA5Q96FF9 252 aa25.47■■□□□ 1.67
DDB1-220ENST00000542337 SNAP23O00161 211 aa25.46■■□□□ 1.67
DDB1-220ENST00000542337 NOGQ13253 232 aa25.46■■□□□ 1.67
DDB1-220ENST00000542337 RGMBQ6NW40 437 aa25.45■■□□□ 1.66
DDB1-220ENST00000542337 KIAA0825Q8IV33 1275 aa25.45■■□□□ 1.66
DDB1-220ENST00000542337 TRMT2AQ8IZ69 625 aaKnown RBP25.45■■□□□ 1.66
DDB1-220ENST00000542337 CCDC102AQ96A19 550 aa25.45■■□□□ 1.66
DDB1-220ENST00000542337 NBPF9Q3BBW0 867 aa25.44■■□□□ 1.66
DDB1-220ENST00000542337 BICC1Q9H694 974 aaKnown RBP25.44■■□□□ 1.66
DDB1-220ENST00000542337 CA12O43570 354 aa25.43■■□□□ 1.66
DDB1-220ENST00000542337 HSPA8P11142 646 aaKnown RBP25.43■■□□□ 1.66
DDB1-220ENST00000542337 IL1R1P14778 569 aa25.43■■□□□ 1.66
DDB1-220ENST00000542337 BRPF1P55201 1214 aaPredicted RBP25.43■■□□□ 1.66
DDB1-220ENST00000542337 UBE4AQ14139 1066 aa25.43■■□□□ 1.66
DDB1-220ENST00000542337 KAZALD1Q96I82 304 aa25.43■■□□□ 1.66
DDB1-220ENST00000542337 PSME4Q14997 1843 aa25.42■■□□□ 1.66
DDB1-220ENST00000542337 MROH5Q6ZUA9 1318 aa25.42■■□□□ 1.66
DDB1-220ENST00000542337 WNT10BO00744 389 aa25.42■■□□□ 1.66
DDB1-220ENST00000542337 ZNF157P51786 506 aaPredicted RBP25.42■■□□□ 1.66
DDB1-220ENST00000542337 RABL6Q3YEC7 729 aaPredicted RBP25.42■■□□□ 1.66
DDB1-220ENST00000542337 IRS2Q9Y4H2 1338 aa25.41■■□□□ 1.66
DDB1-220ENST00000542337 FKBP1BP68106 108 aa25.41■■□□□ 1.66
DDB1-220ENST00000542337 CAPN15O75808 1086 aa25.4■■□□□ 1.66
DDB1-220ENST00000542337 NF2P35240 595 aa25.4■■□□□ 1.66
DDB1-220ENST00000542337 DLGAP5Q15398 846 aa25.4■■□□□ 1.66
DDB1-220ENST00000542337 USP44Q9H0E7 712 aa25.4■■□□□ 1.66
DDB1-220ENST00000542337 SASH1O94885 1247 aa25.39■■□□□ 1.66
DDB1-220ENST00000542337 HIBADHP31937 336 aaKnown RBP25.39■■□□□ 1.66
DDB1-220ENST00000542337 FKBP1AP62942 108 aaKnown RBP25.39■■□□□ 1.66
DDB1-220ENST00000542337 APOBEC3FQ8IUX4 373 aaKnown RBP25.39■■□□□ 1.66
DDB1-220ENST00000542337 PUS3Q9BZE2 481 aaKnown RBP25.39■■□□□ 1.66
DDB1-220ENST00000542337 RIPOR2Q9Y4F9 1068 aa25.39■■□□□ 1.66
DDB1-220ENST00000542337 METTL24Q5JXM2 366 aa25.38■■□□□ 1.65
DDB1-220ENST00000542337 VPS37DQ86XT2 251 aa25.38■■□□□ 1.65
DDB1-220ENST00000542337 ANKRD44Q8N8A2 993 aa25.38■■□□□ 1.65
DDB1-220ENST00000542337 API5Q9BZZ5 524 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms