RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	MRS2	Q9HD23	443 aa		13.58	□□□□□ -0.24
ARAP1-215	ENST00000542264	TSKS	Q9UJT2	592 aa		13.58	□□□□□ -0.24
ARAP1-215	ENST00000542264	PITPNM2	Q9BZ72	1349 aa		13.58	□□□□□ -0.24
ARAP1-215	ENST00000542264	FAM155A	B1AL88	458 aa	Predicted RBP	13.57	□□□□□ -0.24
ARAP1-215	ENST00000542264	ANP32C	O43423	234 aa		13.57	□□□□□ -0.24
ARAP1-215	ENST00000542264	CSF1R	P07333	972 aa		13.57	□□□□□ -0.24
ARAP1-215	ENST00000542264	KIF23	Q02241	960 aa	Predicted RBP	13.57	□□□□□ -0.24
ARAP1-215	ENST00000542264	DNAAF4	Q8WXU2	420 aa		13.57	□□□□□ -0.24
ARAP1-215	ENST00000542264	SAGE1	Q9NXZ1	904 aa		13.57	□□□□□ -0.24
ARAP1-215	ENST00000542264	MYO3B	Q8WXR4	1341 aa		13.57	□□□□□ -0.24
ARAP1-215	ENST00000542264	MED23	Q9ULK4	1368 aa		13.57	□□□□□ -0.24
ARAP1-215	ENST00000542264	ZNF609	O15014	1411 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	LAMB2	P55268	1798 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	CCDC85C	A6NKD9	419 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	VAMP4	O75379	141 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	ITGA6	P23229	1130 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	DACT2	Q5SW24	774 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	TTLL5	Q6EMB2	1281 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	ZIC5	Q96T25	663 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	ZNF804B	A4D1E1	1349 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	LRRC37A	A6NMS7	1700 aa		13.56	□□□□□ -0.24
ARAP1-215	ENST00000542264	WTIP	A6NIX2	430 aa	Predicted RBP	13.55	□□□□□ -0.24
ARAP1-215	ENST00000542264	KCNJ4	P48050	445 aa		13.55	□□□□□ -0.24
ARAP1-215	ENST00000542264	HDAC9	Q9UKV0	1011 aa		13.55	□□□□□ -0.24
ARAP1-215	ENST00000542264	ASTN2	O75129	1339 aa	Predicted RBP	13.55	□□□□□ -0.24
ARAP1-215	ENST00000542264	DDX60	Q8IY21	1712 aa	Known RBP	13.55	□□□□□ -0.24
ARAP1-215	ENST00000542264	TAF1	P21675	1872 aa		13.55	□□□□□ -0.24
ARAP1-215	ENST00000542264	PDE4DIP	Q5VU43	2346 aa		13.55	□□□□□ -0.24
ARAP1-215	ENST00000542264	ANKRD18B	A2A2Z9	1011 aa		13.54	□□□□□ -0.24
ARAP1-215	ENST00000542264	SLC10A3	P09131	477 aa		13.54	□□□□□ -0.24
ARAP1-215	ENST00000542264	CASP7	P55210	303 aa		13.54	□□□□□ -0.24
ARAP1-215	ENST00000542264	FBXW7	Q969H0	707 aa		13.54	□□□□□ -0.24
ARAP1-215	ENST00000542264	CSRNP1	Q96S65	589 aa		13.54	□□□□□ -0.24
ARAP1-215	ENST00000542264	MCOLN1	Q9GZU1	580 aa		13.54	□□□□□ -0.24
ARAP1-215	ENST00000542264	TRPM7	Q96QT4	1865 aa		13.54	□□□□□ -0.24
ARAP1-215	ENST00000542264	TRPA1	O75762	1119 aa		13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	NF2	P35240	595 aa		13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	RGS19	P49795	217 aa		13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	EXOSC9	Q06265	439 aa	Known RBP	13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	IFIT5	Q13325	482 aa	Known RBP	13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	DGKZ	Q13574	1117 aa		13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	FAM161A	Q3B820	660 aa		13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	NBPF9	Q3BBW0	867 aa		13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	RNF186	Q9NXI6	227 aa		13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	SALL2	Q9Y467	1007 aa	Predicted RBP	13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	FANCI	Q9NVI1	1328 aa		13.53	□□□□□ -0.24
ARAP1-215	ENST00000542264	WNT10B	O00744	389 aa		13.52	□□□□□ -0.25
ARAP1-215	ENST00000542264	TXNRD3	Q86VQ6	643 aa		13.52	□□□□□ -0.25
ARAP1-215	ENST00000542264	GTF2I	P78347	998 aa		13.51	□□□□□ -0.25
ARAP1-215	ENST00000542264	MLLT1	Q03111	559 aa	Predicted RBP	13.51	□□□□□ -0.25
ARAP1-215	ENST00000542264	CHRND	Q07001	517 aa		13.51	□□□□□ -0.25
ARAP1-215	ENST00000542264	TTLL12	Q14166	644 aa	Predicted RBP	13.51	□□□□□ -0.25
ARAP1-215	ENST00000542264	BEND3	Q5T5X7	828 aa		13.51	□□□□□ -0.25
ARAP1-215	ENST00000542264	C15orf52	Q6ZUT6	534 aa	Known RBP	13.51	□□□□□ -0.25
ARAP1-215	ENST00000542264	MXD3	Q9BW11	206 aa		13.51	□□□□□ -0.25
ARAP1-215	ENST00000542264	CD209	Q9NNX6	404 aa		13.51	□□□□□ -0.25
ARAP1-215	ENST00000542264	COL4A1	P02462	1669 aa		13.5	□□□□□ -0.25
ARAP1-215	ENST00000542264	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.5	□□□□□ -0.25
ARAP1-215	ENST00000542264	UBE2Q2L	H0YL09	131 aa		13.5	□□□□□ -0.25
ARAP1-215	ENST00000542264	FOXO4	P98177	505 aa		13.5	□□□□□ -0.25
ARAP1-215	ENST00000542264	CCDC57	Q2TAC2	916 aa		13.5	□□□□□ -0.25
ARAP1-215	ENST00000542264	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.5	□□□□□ -0.25
ARAP1-215	ENST00000542264	KIAA0825	Q8IV33	1275 aa		13.5	□□□□□ -0.25
ARAP1-215	ENST00000542264	THSD7B	Q9C0I4	1608 aa		13.5	□□□□□ -0.25
ARAP1-215	ENST00000542264	DLGAP5	Q15398	846 aa		13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264	TAF7L	Q5H9L4	462 aa		13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264	PRAMEF18	Q5VWM3	479 aa		13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264	LMBR1L	Q6UX01	489 aa		13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264	LDHAL6A	Q6ZMR3	332 aa		13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264	ARMC9	Q7Z3E5	817 aa		13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264	RASAL3	Q86YV0	1011 aa		13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264	CHMP3	Q9Y3E7	222 aa		13.49	□□□□□ -0.25
ARAP1-215	ENST00000542264		F6X3S4	739 aa		13.48	□□□□□ -0.25
ARAP1-215	ENST00000542264	GRM8	O00222	908 aa		13.48	□□□□□ -0.25
ARAP1-215	ENST00000542264	ALDH1L1	O75891	902 aa		13.48	□□□□□ -0.25
ARAP1-215	ENST00000542264	TM4SF4	P48230	202 aa		13.48	□□□□□ -0.25
ARAP1-215	ENST00000542264	FKBP1A	P62942	108 aa	Known RBP	13.48	□□□□□ -0.25
ARAP1-215	ENST00000542264	ZNF804A	Q7Z570	1209 aa		13.48	□□□□□ -0.25
ARAP1-215	ENST00000542264	MTMR14	Q8NCE2	650 aa		13.48	□□□□□ -0.25
ARAP1-215	ENST00000542264	MYO1B	O43795	1136 aa		13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	TAF5L	O75529	589 aa		13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	SASH1	O94885	1247 aa		13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	IL1R1	P14778	569 aa		13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	KLRK1	P26718	216 aa		13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	MOB2	Q70IA6	237 aa		13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	HELB	Q8NG08	1087 aa	Predicted RBP	13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	ZBED3	Q96IU2	234 aa	Predicted RBP	13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	CNNM1	Q9NRU3	951 aa		13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	SCAF8	Q9UPN6	1271 aa	Known RBP	13.47	□□□□□ -0.25
ARAP1-215	ENST00000542264	INHBE	P58166	350 aa		13.46	□□□□□ -0.25
ARAP1-215	ENST00000542264	PKN2	Q16513	984 aa	Known RBP	13.46	□□□□□ -0.25
ARAP1-215	ENST00000542264	SLC4A10	Q6U841	1118 aa		13.46	□□□□□ -0.25
ARAP1-215	ENST00000542264	FAM9B	Q8IZU0	186 aa		13.46	□□□□□ -0.25
ARAP1-215	ENST00000542264	SRCIN1	Q9C0H9	1055 aa		13.46	□□□□□ -0.25
ARAP1-215	ENST00000542264	DEFB129	Q9H1M3	183 aa		13.46	□□□□□ -0.25
ARAP1-215	ENST00000542264	SCN9A	Q15858	1988 aa		13.45	□□□□□ -0.26
ARAP1-215	ENST00000542264	UNCX	A6NJT0	531 aa		13.45	□□□□□ -0.26
ARAP1-215	ENST00000542264	PPP1R12B	O60237	982 aa	Predicted RBP	13.45	□□□□□ -0.26
ARAP1-215	ENST00000542264	PTPN12	Q05209	780 aa	Known RBP	13.45	□□□□□ -0.26

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