RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 FAM227BQ96M60 508 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 ARID3AQ99856 593 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 SNRKQ9NRH2 765 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 ARAP2Q8WZ64 1704 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 CHGBP05060 677 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 UQCRFS1P1P0C7P4 283 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 PHKA1P46020 1223 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 NMIQ13287 307 aaPredicted RBP10.47□□□□□ -0.73
THBS3-210ENST00000541576 TBC1D2Q9BYX2 928 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 UBE4AQ14139 1066 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 SCARF1Q14162 830 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 KIAA1211Q6ZU35 1233 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 RBM17Q96I25 401 aaKnown RBP10.47□□□□□ -0.73
THBS3-210ENST00000541576 ANKRD2Q9GZV1 360 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 ZMYND15Q9H091 742 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 RAD50Q92878 1312 aa10.47□□□□□ -0.73
THBS3-210ENST00000541576 EPB41L2O43491 1005 aaKnown RBP10.46□□□□□ -0.73
THBS3-210ENST00000541576 ARID4AP29374 1257 aaPredicted RBP10.46□□□□□ -0.73
THBS3-210ENST00000541576 MCAMP43121 646 aa10.46□□□□□ -0.73
THBS3-210ENST00000541576 CCDC125Q86Z20 511 aa10.46□□□□□ -0.73
THBS3-210ENST00000541576 BRIP1Q9BX63 1249 aa10.46□□□□□ -0.73
THBS3-210ENST00000541576 KLRG2A4D1S0 409 aaPredicted RBP10.46□□□□□ -0.73
THBS3-210ENST00000541576 ZAP70P43403 619 aa10.46□□□□□ -0.73
THBS3-210ENST00000541576 TICAM2Q86XR7 235 aa10.46□□□□□ -0.73
THBS3-210ENST00000541576 ANTXR1Q9H6X2 564 aa10.46□□□□□ -0.73
THBS3-210ENST00000541576 A0A1B0GUL6 1792 aa10.46□□□□□ -0.74
THBS3-210ENST00000541576 QSER1Q2KHR3 1735 aa10.46□□□□□ -0.74
THBS3-210ENST00000541576 NRXN2Q9P2S2 1712 aa10.46□□□□□ -0.74
THBS3-210ENST00000541576 A0A0D9SFI3 127 aa10.46□□□□□ -0.74
THBS3-210ENST00000541576 WTIPA6NIX2 430 aaPredicted RBP10.46□□□□□ -0.74
THBS3-210ENST00000541576 MCCP23508 829 aa10.46□□□□□ -0.74
THBS3-210ENST00000541576 KCNJ4P48050 445 aa10.46□□□□□ -0.74
THBS3-210ENST00000541576 GLIPR1L2Q4G1C9 344 aa10.46□□□□□ -0.74
THBS3-210ENST00000541576 PI16Q6UXB8 463 aa10.46□□□□□ -0.74
THBS3-210ENST00000541576 LSG1Q9H089 658 aaKnown RBP10.46□□□□□ -0.74
THBS3-210ENST00000541576 HOXA10P31260 410 aaPredicted RBP10.45□□□□□ -0.74
THBS3-210ENST00000541576 PALD1Q9ULE6 856 aa10.45□□□□□ -0.74
THBS3-210ENST00000541576 AKAP11Q9UKA4 1901 aa10.45□□□□□ -0.74
THBS3-210ENST00000541576 BCAMP50895 628 aa10.45□□□□□ -0.74
THBS3-210ENST00000541576 LRRFIP1Q32MZ4 808 aaKnown RBP10.45□□□□□ -0.74
THBS3-210ENST00000541576 SLFNL1Q499Z3 407 aa10.45□□□□□ -0.74
THBS3-210ENST00000541576 CD2BP2O95400 341 aaKnown RBP10.45□□□□□ -0.74
THBS3-210ENST00000541576 PTH1RQ03431 593 aa10.45□□□□□ -0.74
THBS3-210ENST00000541576 BECN1Q14457 450 aa10.45□□□□□ -0.74
THBS3-210ENST00000541576 TTF1Q15361 905 aaPredicted RBP10.44□□□□□ -0.74
THBS3-210ENST00000541576 CRAMP1Q96RY5 1269 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 HMG20BQ9P0W2 317 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 ANKRD31Q8N7Z5 1873 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 BBOX1O75936 387 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 PDE6BP35913 854 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 RASGRF1Q13972 1273 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 CAVIN4Q5BKX8 364 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 SPATA5Q8NB90 893 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 ANKIB1Q9P2G1 1089 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 MED23Q9ULK4 1368 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
THBS3-210ENST00000541576 RNF113AO15541 343 aaKnown RBP10.43□□□□□ -0.74
THBS3-210ENST00000541576 CYP2E1P05181 493 aaPredicted RBP10.43□□□□□ -0.74
THBS3-210ENST00000541576 GYG1P46976 350 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
THBS3-210ENST00000541576 VPS37DQ86XT2 251 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 FAM43AQ8N2R8 423 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 SEC62Q99442 399 aaKnown RBP10.43□□□□□ -0.74
THBS3-210ENST00000541576 GNL3LQ9NVN8 582 aaKnown RBP10.43□□□□□ -0.74
THBS3-210ENST00000541576 CCDC171Q6TFL3 1326 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 HSP90AA2PQ14568 343 aaPredicted RBP10.43□□□□□ -0.74
THBS3-210ENST00000541576 MCMDC2Q4G0Z9 681 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 SNX21Q969T3 373 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 XDHP47989 1333 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 ZFYP08048 801 aaPredicted RBP10.43□□□□□ -0.74
THBS3-210ENST00000541576 SRGNP10124 158 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 HSPA4P34932 840 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 RABEP1Q15276 862 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 SLC51AQ86UW1 340 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 PANK2Q9BZ23 570 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.43□□□□□ -0.74
THBS3-210ENST00000541576 HELLSQ9NRZ9 838 aa10.43□□□□□ -0.74
THBS3-210ENST00000541576 NPR1P16066 1061 aa10.42□□□□□ -0.74
THBS3-210ENST00000541576 ANAPC15P60006 121 aa10.42□□□□□ -0.74
THBS3-210ENST00000541576 ZMYM1Q5SVZ6 1142 aa10.42□□□□□ -0.74
THBS3-210ENST00000541576 FAM84BQ96KN1 310 aaPredicted RBP10.42□□□□□ -0.74
THBS3-210ENST00000541576 PDGFDQ9GZP0 370 aaPredicted RBP10.42□□□□□ -0.74
THBS3-210ENST00000541576 LEMD3Q9Y2U8 911 aa10.42□□□□□ -0.74
THBS3-210ENST00000541576 KLRK1P26718 216 aa10.42□□□□□ -0.74
THBS3-210ENST00000541576 TMC4Q7Z404 712 aa10.42□□□□□ -0.74
THBS3-210ENST00000541576 PIH1D3Q9NQM4 214 aaKnown RBP10.42□□□□□ -0.74
THBS3-210ENST00000541576 IDH1O75874 414 aaKnown RBP10.41□□□□□ -0.74
THBS3-210ENST00000541576 ZSCAN25Q6NSZ9 544 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 CCDC129Q6ZRS4 1044 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 RASEFQ8IZ41 740 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 IQSEC3Q9UPP2 1182 aaPredicted RBP10.41□□□□□ -0.74
THBS3-210ENST00000541576 FBXO33Q7Z6M2 555 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 MAP4K1Q92918 833 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 MASTLQ96GX5 879 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 NSFL1CQ9UNZ2 370 aaKnown RBP10.41□□□□□ -0.74
THBS3-210ENST00000541576 MYH7P12883 1935 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 PPEF1O14829 653 aaPredicted RBP10.41□□□□□ -0.74
THBS3-210ENST00000541576 ALDH1B1P30837 517 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 HIBADHP31937 336 aaKnown RBP10.41□□□□□ -0.74
THBS3-210ENST00000541576 GPSM2P81274 684 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms