RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SAMD9LQ8IVG5 1584 aa7.02□□□□□ -1.29
DDB1-219ENST00000541513 MYOM3Q5VTT5 1437 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 ABCC1P33527 1531 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 PLEKHH2Q8IVE3 1493 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 ATAD2Q6PL18 1390 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 EIF1AYO14602 144 aaKnown RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 OPLAHO14841 1288 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 NRDCO43847 1150 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 ZNF500O60304 480 aaPredicted RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 PTPREP23469 700 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 CTHP32929 405 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 IFRD2Q12894 506 aaPredicted RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 TCEA2Q15560 299 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 DALRD3Q5D0E6 543 aaKnown RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 DZIP3Q86Y13 1208 aaKnown RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 SVIPQ8NHG7 77 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 EMID1Q96A84 441 aaPredicted RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 MYO19Q96H55 970 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 USB1Q9BQ65 265 aaKnown RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 INO80BQ9C086 356 aaPredicted RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 FAM8A1Q9UBU6 413 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 NRBP1Q9UHY1 535 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 VPS9D1Q9Y2B5 631 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 EFR3BQ9Y2G0 817 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 SLC27A5Q9Y2P5 690 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 SALL2Q9Y467 1007 aaPredicted RBP7.01□□□□□ -1.29
DDB1-219ENST00000541513 MRVI1Q9Y6F6 885 aa7.01□□□□□ -1.29
DDB1-219ENST00000541513 ADGRL1O94910 1474 aa7□□□□□ -1.29
DDB1-219ENST00000541513 WASLO00401 505 aaPredicted RBP7□□□□□ -1.29
DDB1-219ENST00000541513 BPNT1O95861 308 aa7□□□□□ -1.29
DDB1-219ENST00000541513 JUNDP17535 347 aa7□□□□□ -1.29
DDB1-219ENST00000541513 LMOD3Q0VAK6 560 aa7□□□□□ -1.29
DDB1-219ENST00000541513 NBPF20Q3BBV1 942 aa7□□□□□ -1.29
DDB1-219ENST00000541513 TNNI3KQ59H18 835 aa7□□□□□ -1.29
DDB1-219ENST00000541513 SH3BP5LQ7L8J4 393 aa7□□□□□ -1.29
DDB1-219ENST00000541513 RUNDC1Q96C34 613 aa7□□□□□ -1.29
DDB1-219ENST00000541513 RSRP1Q9BUV0 290 aa7□□□□□ -1.29
DDB1-219ENST00000541513 NOC4LQ9BVI4 516 aaKnown RBP7□□□□□ -1.29
DDB1-219ENST00000541513 SLC4A5Q9BY07 1137 aa7□□□□□ -1.29
DDB1-219ENST00000541513 KBTBD4Q9NVX7 518 aa7□□□□□ -1.29
DDB1-219ENST00000541513 ZNF69Q9UC07 566 aa7□□□□□ -1.29
DDB1-219ENST00000541513 R3HCC1Q9Y3T6 440 aaKnown RBP7□□□□□ -1.29
DDB1-219ENST00000541513 PTPN23Q9H3S7 1636 aa7□□□□□ -1.29
DDB1-219ENST00000541513 KIAA1107Q9UPP5 1409 aa7□□□□□ -1.29
DDB1-219ENST00000541513 FRMPD1Q5SYB0 1578 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 DENND4BO75064 1496 aaPredicted RBP6.99□□□□□ -1.29
DDB1-219ENST00000541513 CDC27P30260 824 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 EPHA4P54764 986 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 MCL1Q07820 350 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 ORC1Q13415 861 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 THSD4Q6ZMP0 1018 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 ZBTB33Q86T24 672 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 NKX2-3Q8TAU0 364 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 THAP3Q8WTV1 239 aaPredicted RBP6.99□□□□□ -1.29
DDB1-219ENST00000541513 OSBPL7Q9BZF2 842 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 SRCIN1Q9C0H9 1055 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 GINM1Q9NU53 330 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 CFDP1Q9UEE9 299 aaPredicted RBP6.99□□□□□ -1.29
DDB1-219ENST00000541513 ADAMTS1Q9UHI8 967 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 LEMD3Q9Y2U8 911 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 ZMYM4Q5VZL5 1548 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 FGD6Q6ZV73 1430 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 KDM5CP41229 1560 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 ARHGEF5Q12774 1597 aa6.99□□□□□ -1.29
DDB1-219ENST00000541513 CAMSAP2Q08AD1 1489 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 TCOF1Q13428 1488 aaKnown RBP6.98□□□□□ -1.29
DDB1-219ENST00000541513 COL17A1Q9UMD9 1497 aaPredicted RBP6.98□□□□□ -1.29
DDB1-219ENST00000541513 SYCP2Q9BX26 1530 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 ARHGEF12Q9NZN5 1544 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 A6NJY4 79 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 TMEM229AB2RXF0 380 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 ZBTB39O15060 712 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 PDPK1O15530 556 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 SCGB1D2O95969 90 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 PDGFAP04085 211 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 STAT3P40763 770 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.98□□□□□ -1.29
DDB1-219ENST00000541513 PPP4R4Q6NUP7 873 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 DDX42Q86XP3 938 aaKnown RBP eCLIP6.98□□□□□ -1.29
DDB1-219ENST00000541513 THNSL2Q86YJ6 484 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 IFNL3Q8IZI9 196 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 PAGR1Q9BTK6 254 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 FAM126AQ9BYI3 521 aaPredicted RBP6.98□□□□□ -1.29
DDB1-219ENST00000541513 EVA1BQ9NVM1 165 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 POGZQ7Z3K3 1410 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 SCAPERQ9BY12 1400 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 ZNF518AQ6AHZ1 1483 aa6.98□□□□□ -1.29
DDB1-219ENST00000541513 CCDC163A0A0D9SF12 145 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 CCDC85CA6NKD9 419 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 BHMG1C9JSJ3 638 aaPredicted RBP6.97□□□□□ -1.29
DDB1-219ENST00000541513 BACH1O14867 736 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 COPB2P35606 906 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 POU5F1Q01860 360 aaKnown RBP6.97□□□□□ -1.29
DDB1-219ENST00000541513 PWP1Q13610 501 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 MORC3Q14149 939 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 DDR2Q16832 855 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 KMT5BQ4FZB7 885 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 TM4SF20Q53R12 229 aa6.97□□□□□ -1.29
DDB1-219ENST00000541513 RNF19BQ6ZMZ0 732 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms