RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 POLRMTO00411 1230 aaKnown RBP6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 ZBTB7BO15156 539 aaPredicted RBP6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 RGS20O76081 388 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 PCCAP05165 728 aaPredicted RBP6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 CWF19L2Q2TBE0 894 aaKnown RBP6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 PPP1R42Q7Z4L9 355 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 ITPRIPQ8IWB1 547 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 KRI1Q8N9T8 703 aaKnown RBP6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 UTP14AQ9BVJ6 771 aaKnown RBP6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 PDGFDQ9GZP0 370 aaPredicted RBP6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 NYXQ9GZU5 481 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 MTFR1LQ9H019 292 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 USP44Q9H0E7 712 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 HDAC5Q9UQL6 1122 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 CDHR2Q9BYE9 1310 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 NTSR2O95665 410 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 GNAI3P08754 354 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 MMP10P09238 476 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 HSP90B1P14625 803 aaKnown RBP6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 GPTP24298 496 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 CASP7P55210 303 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 KCNC4Q03721 635 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 DDR1Q08345 913 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 SLC10A5Q5PT55 438 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 SUSD4Q5VX71 490 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 CCDC102AQ96A19 550 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 MEIS3Q99687 375 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 PLA2G12BQ9BX93 195 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 ZBTB40Q9NUA8 1239 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 COG6Q9Y2V7 657 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 NUP188Q5SRE5 1749 aa6.27□□□□□ -1.41
SPARCL1-209ENST00000541496 SH3TC1Q8TE82 1336 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 RIC1Q4ADV7 1423 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 KLRG2A4D1S0 409 aaPredicted RBP6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 SERPINB2P05120 415 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 NBPF7P0C2Y1 421 aaPredicted RBP6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 UBTFL1P0CB47 393 aaPredicted RBP6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 MTX1Q13505 466 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 RABL6Q3YEC7 729 aaPredicted RBP6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 ERICH6BQ5W0A0 696 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 PRR5LQ6MZQ0 368 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 BICDL1Q6ZP65 573 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 UBE3BQ7Z3V4 1068 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 NBPF5PQ86XG9 351 aaPredicted RBP6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 CNBD1Q8NA66 436 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 CRBNQ96SW2 442 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 C9orf78Q9NZ63 289 aaPredicted RBP6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 TRMT112Q9UI30 125 aaKnown RBP6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 PARP3Q9Y6F1 533 aa6.26□□□□□ -1.41
SPARCL1-209ENST00000541496 IRS4O14654 1257 aaPredicted RBP6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 ACTN4O43707 911 aaKnown RBP6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 PDE8AO60658 829 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 ZBTB7AO95365 584 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 GNAI2P04899 355 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 CFHP08603 1231 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 POLD1P28340 1107 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 CLCN1P35523 988 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 APLP1P51693 650 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 CRY2Q49AN0 593 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 MSL1Q68DK7 614 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 FAM89AQ96GI7 184 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 KAZALD1Q96I82 304 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 PHOX2BQ99453 314 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 BRIP1Q9BX63 1249 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 IL21Q9HBE4 155 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 PDZRN3Q9UPQ7 1066 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 SCN7AQ01118 1682 aa6.25□□□□□ -1.41
SPARCL1-209ENST00000541496 MYH14Q7Z406 1995 aaKnown RBP6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 RTL9Q8NET4 1388 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 ABCC12Q96J65 1359 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 NEFLP07196 543 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 CSF1RP07333 972 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 GTF2E1P29083 439 aaPredicted RBP6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 CTSWP56202 376 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 ST5P78524 1137 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 FOXO4P98177 505 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 SF3B3Q15393 1217 aaKnown RBP6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 ERFEQ4G0M1 354 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 NUTM1Q86Y26 1132 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 RPAP2Q8IXW5 612 aaPredicted RBP6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 SYNE4Q8N205 404 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 EXOC6Q8TAG9 804 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 SUCLG2Q96I99 432 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 SPON1Q9HCB6 807 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 PCDHB3Q9Y5E6 796 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 VIRMAQ69YN4 1812 aaKnown RBP6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 TAF1LQ8IZX4 1826 aa6.24□□□□□ -1.41
SPARCL1-209ENST00000541496 DDX11L8A8MPP1 907 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 SLC10A3P09131 477 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 HCLS1P14317 486 aaPredicted RBP6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 PDE6BP35913 854 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 TJAP1Q5JTD0 557 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 EPHA10Q5JZY3 1008 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 CEP85Q6P2H3 762 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 ANKRD44Q8N8A2 993 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 RDH13Q8NBN7 331 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 TTLL11Q8NHH1 800 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 NLRP3Q96P20 1036 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 MTRQ99707 1265 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms