RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 WNT10BO00744 389 aa15.36■□□□□ 0.05
COPA-205ENST00000541366 LMOD3Q0VAK6 560 aa15.36■□□□□ 0.05
COPA-205ENST00000541366 NOM1Q5C9Z4 860 aaKnown RBP15.36■□□□□ 0.05
COPA-205ENST00000541366 RIC3Q7Z5B4 369 aa15.36■□□□□ 0.05
COPA-205ENST00000541366 FBXW7Q969H0 707 aa15.36■□□□□ 0.05
COPA-205ENST00000541366 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
COPA-205ENST00000541366 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
COPA-205ENST00000541366 TRIM35Q9UPQ4 493 aa15.36■□□□□ 0.05
COPA-205ENST00000541366 XDHP47989 1333 aa15.36■□□□□ 0.05
COPA-205ENST00000541366 CCDC152Q4G0S7 254 aa15.35■□□□□ 0.05
COPA-205ENST00000541366 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
COPA-205ENST00000541366 DUSP27Q5VZP5 1158 aa15.35■□□□□ 0.05
COPA-205ENST00000541366 PODNQ7Z5L7 613 aa15.35■□□□□ 0.05
COPA-205ENST00000541366 GCC1Q96CN9 775 aa15.35■□□□□ 0.05
COPA-205ENST00000541366 ZNF646O15015 1829 aaPredicted RBP15.35■□□□□ 0.05
COPA-205ENST00000541366 ATP2B4P23634 1241 aa15.34■□□□□ 0.05
COPA-205ENST00000541366 SREBF2Q12772 1141 aa15.34■□□□□ 0.05
COPA-205ENST00000541366 ANKRD18AQ8IVF6 992 aa15.34■□□□□ 0.05
COPA-205ENST00000541366 CFHR5Q9BXR6 569 aa15.34■□□□□ 0.05
COPA-205ENST00000541366 TRIM17Q9Y577 477 aa15.34■□□□□ 0.05
COPA-205ENST00000541366 PDE8AO60658 829 aa15.33■□□□□ 0.04
COPA-205ENST00000541366 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.04
COPA-205ENST00000541366 HOXB7P09629 217 aa15.33■□□□□ 0.04
COPA-205ENST00000541366 NF2P35240 595 aa15.33■□□□□ 0.04
COPA-205ENST00000541366 SPRYD7Q5W111 196 aa15.33■□□□□ 0.04
COPA-205ENST00000541366 OTOP1Q7RTM1 612 aa15.33■□□□□ 0.04
COPA-205ENST00000541366 TXNRD3Q86VQ6 643 aa15.33■□□□□ 0.04
COPA-205ENST00000541366 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
COPA-205ENST00000541366 LDLRAD1Q5T700 205 aa15.32■□□□□ 0.04
COPA-205ENST00000541366 ARMC9Q7Z3E5 817 aa15.32■□□□□ 0.04
COPA-205ENST00000541366 OGFOD1Q8N543 542 aa15.32■□□□□ 0.04
COPA-205ENST00000541366 ANGEL1Q9UNK9 670 aaKnown RBP15.32■□□□□ 0.04
COPA-205ENST00000541366 SPEF2Q9C093 1822 aa15.31■□□□□ 0.04
COPA-205ENST00000541366 IGF2BP3O00425 579 aaKnown RBP eCLIP15.31■□□□□ 0.04
COPA-205ENST00000541366 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
COPA-205ENST00000541366 CLMNQ96JQ2 1002 aa15.31■□□□□ 0.04
COPA-205ENST00000541366 MINPP1Q9UNW1 487 aa15.31■□□□□ 0.04
COPA-205ENST00000541366 MED23Q9ULK4 1368 aa15.31■□□□□ 0.04
COPA-205ENST00000541366 SZT2Q5T011 3432 aa15.31■□□□□ 0.04
COPA-205ENST00000541366 KLRK1P26718 216 aa15.3■□□□□ 0.04
COPA-205ENST00000541366 CCT4P50991 539 aaKnown RBP15.3■□□□□ 0.04
COPA-205ENST00000541366 CAP1Q01518 475 aa15.3■□□□□ 0.04
COPA-205ENST00000541366 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
COPA-205ENST00000541366 KIAA0825Q8IV33 1275 aa15.3■□□□□ 0.04
COPA-205ENST00000541366 CCDC191Q8NCU4 936 aa15.3■□□□□ 0.04
COPA-205ENST00000541366 MBIPQ9NS73 344 aa15.3■□□□□ 0.04
COPA-205ENST00000541366 CWC25Q9NXE8 425 aaPredicted RBP15.3■□□□□ 0.04
COPA-205ENST00000541366 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
COPA-205ENST00000541366 EN2P19622 333 aaPredicted RBP15.29■□□□□ 0.04
COPA-205ENST00000541366 FXR1P51114 621 aaKnown RBP eCLIP15.29■□□□□ 0.047e-9■■■■□ 24.2
COPA-205ENST00000541366 STRIP1Q5VSL9 837 aa15.29■□□□□ 0.04
COPA-205ENST00000541366 CD99L2Q8TCZ2 262 aa15.29■□□□□ 0.04
COPA-205ENST00000541366 SLC10A4Q96EP9 437 aa15.29■□□□□ 0.04
COPA-205ENST00000541366 ZBED3Q96IU2 234 aaPredicted RBP15.29■□□□□ 0.04
COPA-205ENST00000541366 GREM2Q9H772 168 aa15.29■□□□□ 0.04
COPA-205ENST00000541366 PCDHAC2Q9Y5I4 1007 aa15.29■□□□□ 0.04
COPA-205ENST00000541366 CTSWP56202 376 aa15.28■□□□□ 0.04
COPA-205ENST00000541366 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
COPA-205ENST00000541366 APOBEC3FQ8IUX4 373 aaKnown RBP15.28■□□□□ 0.04
COPA-205ENST00000541366 TTLL11Q8NHH1 800 aa15.28■□□□□ 0.04
COPA-205ENST00000541366 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
COPA-205ENST00000541366 CEP290O15078 2479 aa15.28■□□□□ 0.04
COPA-205ENST00000541366 SSC5DA1L4H1 1573 aa15.28■□□□□ 0.04
COPA-205ENST00000541366 MANSC4A6NHS7 340 aaPredicted RBP15.27■□□□□ 0.04
COPA-205ENST00000541366 ALDH1A1P00352 501 aa15.27■□□□□ 0.04
COPA-205ENST00000541366 TTLL5Q6EMB2 1281 aa15.27■□□□□ 0.04
COPA-205ENST00000541366 WNK4Q96J92 1243 aa15.27■□□□□ 0.04
COPA-205ENST00000541366 CDC5LQ99459 802 aaKnown RBP15.27■□□□□ 0.04
COPA-205ENST00000541366 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
COPA-205ENST00000541366 COA1Q9GZY4 146 aa15.27■□□□□ 0.04
COPA-205ENST00000541366 DEFB129Q9H1M3 183 aa15.27■□□□□ 0.04
COPA-205ENST00000541366 BSDC1Q9NW68 430 aaPredicted RBP15.27■□□□□ 0.04
COPA-205ENST00000541366 PTPN22Q9Y2R2 807 aa15.27■□□□□ 0.04
COPA-205ENST00000541366 TRIOBPQ9H2D6 2365 aa15.26■□□□□ 0.03
COPA-205ENST00000541366 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
COPA-205ENST00000541366 GJA5P36382 358 aa15.26■□□□□ 0.03
COPA-205ENST00000541366 GTF2IP78347 998 aa15.26■□□□□ 0.03
COPA-205ENST00000541366 CRHR2Q13324 411 aa15.26■□□□□ 0.03
COPA-205ENST00000541366 INTS3Q68E01 1043 aaKnown RBP15.26■□□□□ 0.03
COPA-205ENST00000541366 RUNDC1Q96C34 613 aa15.26■□□□□ 0.03
COPA-205ENST00000541366 AOX1Q06278 1338 aa15.25■□□□□ 0.03
COPA-205ENST00000541366 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
COPA-205ENST00000541366 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
COPA-205ENST00000541366 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
COPA-205ENST00000541366 RBBP6Q7Z6E9 1792 aaKnown RBP15.25■□□□□ 0.03
COPA-205ENST00000541366 SNAP23O00161 211 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 ZNF853P0CG23 659 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 INHBEP58166 350 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 MAP3K11Q16584 847 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 C8orf58Q8NAV2 365 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 ARMC5Q96C12 935 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 PTPN18Q99952 460 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 EFCC1Q9HA90 598 aa15.24■□□□□ 0.03
COPA-205ENST00000541366 MYH3P11055 1940 aa15.23■□□□□ 0.03
COPA-205ENST00000541366 ZNF804BA4D1E1 1349 aa15.23■□□□□ 0.03
COPA-205ENST00000541366 CLRN2A0PK11 232 aa15.23■□□□□ 0.03
COPA-205ENST00000541366 F8W031 263 aaPredicted RBP15.23■□□□□ 0.03
COPA-205ENST00000541366 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
COPA-205ENST00000541366 CWF19L2Q2TBE0 894 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms