RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 ZNF853P0CG23 659 aa7.4□□□□□ -1.22
CDKN3-206ENST00000541304 BMP2P12643 396 aa7.4□□□□□ -1.22
CDKN3-206ENST00000541304 VEGFBP49765 207 aa7.4□□□□□ -1.22
CDKN3-206ENST00000541304 SLFN5Q08AF3 891 aa7.4□□□□□ -1.22
CDKN3-206ENST00000541304 TAF7Q15545 349 aaPredicted RBP7.4□□□□□ -1.22
CDKN3-206ENST00000541304 ZBTB33Q86T24 672 aa7.4□□□□□ -1.22
CDKN3-206ENST00000541304 SLC52A2Q9HAB3 445 aa7.4□□□□□ -1.22
CDKN3-206ENST00000541304 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.22
CDKN3-206ENST00000541304 RRP7AQ9Y3A4 280 aaKnown RBP7.4□□□□□ -1.22
CDKN3-206ENST00000541304 GPSM3Q9Y4H4 160 aa7.4□□□□□ -1.22
CDKN3-206ENST00000541304 SCN11AQ9UI33 1791 aa7.4□□□□□ -1.23
CDKN3-206ENST00000541304 DLG5Q8TDM6 1919 aa7.4□□□□□ -1.23
CDKN3-206ENST00000541304 SOBPA7XYQ1 873 aa7.39□□□□□ -1.23
CDKN3-206ENST00000541304 CHL1O00533 1208 aa7.39□□□□□ -1.23
CDKN3-206ENST00000541304 CABP4P57796 275 aa7.39□□□□□ -1.23
CDKN3-206ENST00000541304 PTK2Q05397 1052 aa7.39□□□□□ -1.23
CDKN3-206ENST00000541304 TRMT2AQ8IZ69 625 aaKnown RBP7.39□□□□□ -1.23
CDKN3-206ENST00000541304 TMOD3Q9NYL9 352 aa7.39□□□□□ -1.23
CDKN3-206ENST00000541304 PAPPAQ13219 1627 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 FANCIQ9NVI1 1328 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 RFC5P40937 340 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 DHX9Q08211 1270 aaKnown RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 PPP1R26Q5T8A7 1209 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 DUSP27Q5VZP5 1158 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 FAM196AQ6ZSG2 479 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 MCM10Q7L590 875 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 SEPT12Q8IYM1 358 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 TTC5Q8N0Z6 440 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 IL17REQ8NFR9 667 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 DDX54Q8TDD1 881 aaKnown RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 SMARCC1Q92922 1105 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 KCTD15Q96SI1 283 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 TSEN34Q9BSV6 310 aaKnown RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 GOPCQ9HD26 462 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 HMX1Q9NP08 348 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 TSPYL4Q9UJ04 414 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 SIPA1L3O60292 1781 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 NHSQ6T4R5 1651 aa7.38□□□□□ -1.23
CDKN3-206ENST00000541304 CICQ96RK0 1608 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-206ENST00000541304 RGS12O14924 1447 aa7.37□□□□□ -1.23
CDKN3-206ENST00000541304 BTBD11A6QL63 1104 aa7.37□□□□□ -1.23
CDKN3-206ENST00000541304 GMPRP36959 345 aa7.37□□□□□ -1.23
CDKN3-206ENST00000541304 NBPF20Q3BBV1 942 aa7.37□□□□□ -1.23
CDKN3-206ENST00000541304 MPRIPQ6WCQ1 1025 aa7.37□□□□□ -1.23
CDKN3-206ENST00000541304 KRT27Q7Z3Y8 459 aa7.37□□□□□ -1.23
CDKN3-206ENST00000541304 PCMTD1Q96MG8 357 aaPredicted RBP7.37□□□□□ -1.23
CDKN3-206ENST00000541304 KDM3BQ7LBC6 1761 aa7.37□□□□□ -1.23
CDKN3-206ENST00000541304 ZNF831Q5JPB2 1677 aa7.37□□□□□ -1.23
CDKN3-206ENST00000541304 DOT1LQ8TEK3 1739 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 ERBB4Q15303 1308 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 ALDH1L2Q3SY69 923 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 ZNF790Q6PG37 636 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 MARCH10Q8NA82 808 aaPredicted RBP7.36□□□□□ -1.23
CDKN3-206ENST00000541304 ADAM32Q8TC27 787 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 EPS8L1Q8TE68 723 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 FMNL2Q96PY5 1086 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 OCSTAMPQ9BR26 566 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 TEX13AQ9BXU3 409 aaPredicted RBP7.36□□□□□ -1.23
CDKN3-206ENST00000541304 MBIPQ9NS73 344 aa7.36□□□□□ -1.23
CDKN3-206ENST00000541304 TOGARAM1Q9Y4F4 1720 aa7.35□□□□□ -1.23
CDKN3-206ENST00000541304 KIF16BQ96L93 1317 aa7.35□□□□□ -1.23
CDKN3-206ENST00000541304 VSIG8P0DPA2 414 aa7.35□□□□□ -1.23
CDKN3-206ENST00000541304 DCTN1Q14203 1278 aa7.35□□□□□ -1.23
CDKN3-206ENST00000541304 INTS6LQ5JSJ4 861 aaKnown RBP7.35□□□□□ -1.23
CDKN3-206ENST00000541304 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.35□□□□□ -1.23
CDKN3-206ENST00000541304 LGR6Q9HBX8 967 aa7.35□□□□□ -1.23
CDKN3-206ENST00000541304 DNMT3LQ9UJW3 386 aa7.35□□□□□ -1.23
CDKN3-206ENST00000541304 UBR2Q8IWV8 1755 aa7.35□□□□□ -1.23
CDKN3-206ENST00000541304 HEG1Q9ULI3 1381 aa7.34□□□□□ -1.23
CDKN3-206ENST00000541304 RGPD3A6NKT7 1758 aaPredicted RBP7.34□□□□□ -1.23
CDKN3-206ENST00000541304 RGPD4Q7Z3J3 1758 aa7.34□□□□□ -1.23
CDKN3-206ENST00000541304 SNRPA1P09661 255 aaKnown RBP7.34□□□□□ -1.23
CDKN3-206ENST00000541304 BRPF1P55201 1214 aaPredicted RBP7.34□□□□□ -1.23
CDKN3-206ENST00000541304 TWISTNBQ3B726 338 aaPredicted RBP7.34□□□□□ -1.23
CDKN3-206ENST00000541304 Q6ZVU0 165 aa7.34□□□□□ -1.23
CDKN3-206ENST00000541304 NFATC2IPQ8NCF5 419 aa7.34□□□□□ -1.23
CDKN3-206ENST00000541304 THUMPD2Q9BTF0 503 aaKnown RBP7.34□□□□□ -1.23
CDKN3-206ENST00000541304 RGS17Q9UGC6 210 aaPredicted RBP7.34□□□□□ -1.23
CDKN3-206ENST00000541304 LAS1LQ9Y4W2 734 aaKnown RBP7.34□□□□□ -1.23
CDKN3-206ENST00000541304 VIRMAQ69YN4 1812 aaKnown RBP7.34□□□□□ -1.24
CDKN3-206ENST00000541304 LAMB4A4D0S4 1761 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 KCPQ6ZWJ8 1503 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 FAM181BA6NEQ2 426 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 TTLL8A6PVC2 850 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 EIF4A1P60842 406 aaKnown RBP7.33□□□□□ -1.24
CDKN3-206ENST00000541304 CBLBQ13191 982 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.33□□□□□ -1.24
CDKN3-206ENST00000541304 TMEM259Q4ZIN3 620 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 CCDC30Q5VVM6 783 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 CCDC125Q86Z20 511 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 STK31Q9BXU1 1019 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 RCAN3Q9UKA8 241 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 PALLDQ8WX93 1383 aa7.33□□□□□ -1.24
CDKN3-206ENST00000541304 IPO8O15397 1037 aaKnown RBP7.32□□□□□ -1.24
CDKN3-206ENST00000541304 STARD3NLO95772 234 aa7.32□□□□□ -1.24
CDKN3-206ENST00000541304 EXOSC9Q06265 439 aaKnown RBP7.32□□□□□ -1.24
CDKN3-206ENST00000541304 SLC27A3Q5K4L6 730 aa7.32□□□□□ -1.24
CDKN3-206ENST00000541304 POTEAQ6S8J7 498 aa7.32□□□□□ -1.24
CDKN3-206ENST00000541304 DZIP3Q86Y13 1208 aaKnown RBP7.32□□□□□ -1.24
CDKN3-206ENST00000541304 PIGBQ92521 554 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms