RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TAF5LO75529 589 aa16.41■□□□□ 0.22
LTBR-208ENST00000541005 APLP1P51693 650 aa16.41■□□□□ 0.22
LTBR-208ENST00000541005 EAPPQ56P03 285 aaPredicted RBP16.41■□□□□ 0.22
LTBR-208ENST00000541005 HELBQ8NG08 1087 aaPredicted RBP16.41■□□□□ 0.22
LTBR-208ENST00000541005 PUS3Q9BZE2 481 aaKnown RBP16.41■□□□□ 0.22
LTBR-208ENST00000541005 MTX1Q13505 466 aa16.4■□□□□ 0.22
LTBR-208ENST00000541005 UBE4AQ14139 1066 aa16.4■□□□□ 0.22
LTBR-208ENST00000541005 TMEM57Q8N5G2 664 aa16.4■□□□□ 0.22
LTBR-208ENST00000541005 VGLL2Q8N8G2 317 aa16.4■□□□□ 0.22
LTBR-208ENST00000541005 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
LTBR-208ENST00000541005 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
LTBR-208ENST00000541005 USP17L3A6NCW0 530 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 USP17L4A6NCW7 530 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 SNAP23O00161 211 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 PTPN12Q05209 780 aaKnown RBP16.39■□□□□ 0.21
LTBR-208ENST00000541005 LRRC24Q50LG9 513 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 RSBN1LQ6PCB5 846 aaPredicted RBP16.39■□□□□ 0.21
LTBR-208ENST00000541005 USP17L1Q7RTZ2 530 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 MICALL2Q8IY33 904 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
LTBR-208ENST00000541005 AGBL3Q8NEM8 1001 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 GMLQ99445 158 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 CNOT7Q9UIV1 285 aaKnown RBP16.39■□□□□ 0.21
LTBR-208ENST00000541005 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
LTBR-208ENST00000541005 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
LTBR-208ENST00000541005 EYA2O00167 538 aa16.38■□□□□ 0.21
LTBR-208ENST00000541005 CIAO1O76071 339 aa16.38■□□□□ 0.21
LTBR-208ENST00000541005 ITGBL1O95965 494 aaPredicted RBP16.38■□□□□ 0.21
LTBR-208ENST00000541005 RLBP1P12271 317 aa16.38■□□□□ 0.21
LTBR-208ENST00000541005 STRIP1Q5VSL9 837 aa16.38■□□□□ 0.21
LTBR-208ENST00000541005 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
LTBR-208ENST00000541005 KLHDC4Q8TBB5 520 aa16.38■□□□□ 0.21
LTBR-208ENST00000541005 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 H7C1D1 291 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 IL1R1P14778 569 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 ZNF280AP59817 542 aaPredicted RBP16.37■□□□□ 0.21
LTBR-208ENST00000541005 DACT2Q5SW24 774 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 ZNF804AQ7Z570 1209 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 TRPM4Q8TD43 1214 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 ZC3H15Q8WU90 426 aaKnown RBP16.37■□□□□ 0.21
LTBR-208ENST00000541005 CD209Q9NNX6 404 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 PGAP2Q9UHJ9 254 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 MYO3BQ8WXR4 1341 aa16.37■□□□□ 0.21
LTBR-208ENST00000541005 CEP350Q5VT06 3117 aa16.36■□□□□ 0.21
LTBR-208ENST00000541005 PLIN1O60240 522 aa16.36■□□□□ 0.21
LTBR-208ENST00000541005 PDE8BO95263 885 aa16.36■□□□□ 0.21
LTBR-208ENST00000541005 GNAI2P04899 355 aa16.36■□□□□ 0.21
LTBR-208ENST00000541005 METTL24Q5JXM2 366 aa16.36■□□□□ 0.21
LTBR-208ENST00000541005 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
LTBR-208ENST00000541005 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
LTBR-208ENST00000541005 CLEC11AQ9Y240 323 aa16.36■□□□□ 0.21
LTBR-208ENST00000541005 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
LTBR-208ENST00000541005 MAP1SQ66K74 1059 aaPredicted RBP16.35■□□□□ 0.21
LTBR-208ENST00000541005 ATG9AQ7Z3C6 839 aa16.35■□□□□ 0.21
LTBR-208ENST00000541005 CNTROBQ8N137 903 aa16.35■□□□□ 0.21
LTBR-208ENST00000541005 MS4A1P11836 297 aa16.34■□□□□ 0.21
LTBR-208ENST00000541005 FGFR2P21802 821 aa16.34■□□□□ 0.21
LTBR-208ENST00000541005 MMP14P50281 582 aa16.34■□□□□ 0.21
LTBR-208ENST00000541005 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
LTBR-208ENST00000541005 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
LTBR-208ENST00000541005 SRGAP3O43295 1099 aa16.33■□□□□ 0.2
LTBR-208ENST00000541005 USP17L8P0C7I0 530 aa16.33■□□□□ 0.2
LTBR-208ENST00000541005 FKBP1AP62942 108 aaKnown RBP16.33■□□□□ 0.2
LTBR-208ENST00000541005 TTLL5Q6EMB2 1281 aa16.33■□□□□ 0.2
LTBR-208ENST00000541005 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.2
LTBR-208ENST00000541005 FAM84BQ96KN1 310 aaPredicted RBP16.33■□□□□ 0.2
LTBR-208ENST00000541005 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
LTBR-208ENST00000541005 EGFRP00533 1210 aa16.32■□□□□ 0.2
LTBR-208ENST00000541005 HIBADHP31937 336 aaKnown RBP16.32■□□□□ 0.2
LTBR-208ENST00000541005 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
LTBR-208ENST00000541005 GTF2IP78347 998 aa16.32■□□□□ 0.2
LTBR-208ENST00000541005 KIF4BQ2VIQ3 1234 aa16.32■□□□□ 0.2
LTBR-208ENST00000541005 FAM205AQ6ZU69 1335 aa16.32■□□□□ 0.2
LTBR-208ENST00000541005 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
LTBR-208ENST00000541005 TDRD7Q8NHU6 1098 aaKnown RBP16.32■□□□□ 0.2
LTBR-208ENST00000541005 CREBZFQ9NS37 354 aa16.32■□□□□ 0.2
LTBR-208ENST00000541005 SASH1O94885 1247 aa16.31■□□□□ 0.2
LTBR-208ENST00000541005 GYG1P46976 350 aa16.31■□□□□ 0.2
LTBR-208ENST00000541005 TBC1D10BQ4KMP7 808 aaPredicted RBP16.31■□□□□ 0.2
LTBR-208ENST00000541005 DNAJC5GQ8N7S2 189 aa16.31■□□□□ 0.2
LTBR-208ENST00000541005 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
LTBR-208ENST00000541005 MXD3Q9BW11 206 aa16.31■□□□□ 0.2
LTBR-208ENST00000541005 SIL1Q9H173 461 aa16.31■□□□□ 0.2
LTBR-208ENST00000541005 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
LTBR-208ENST00000541005 PNMA6EA0A0J9YXQ4 647 aa16.3■□□□□ 0.2
LTBR-208ENST00000541005 CERS5Q8N5B7 392 aa16.3■□□□□ 0.2
LTBR-208ENST00000541005 LPIN2Q92539 896 aa16.3■□□□□ 0.2
LTBR-208ENST00000541005 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
LTBR-208ENST00000541005 MYOZ2Q9NPC6 264 aa16.3■□□□□ 0.2
LTBR-208ENST00000541005 ZBTB22O15209 634 aa16.29■□□□□ 0.2
LTBR-208ENST00000541005 IFIT1P09914 478 aaKnown RBP16.29■□□□□ 0.2
LTBR-208ENST00000541005 SLC5A1P13866 664 aa16.29■□□□□ 0.2
LTBR-208ENST00000541005 HTRA3P83110 453 aa16.29■□□□□ 0.2
LTBR-208ENST00000541005 POLA2Q14181 598 aa16.29■□□□□ 0.2
LTBR-208ENST00000541005 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
LTBR-208ENST00000541005 OGFOD1Q8N543 542 aa16.29■□□□□ 0.2
LTBR-208ENST00000541005 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
LTBR-208ENST00000541005 PITPNM2Q9BZ72 1349 aa16.28■□□□□ 0.2
LTBR-208ENST00000541005 THSD7BQ9C0I4 1608 aa16.28■□□□□ 0.2
LTBR-208ENST00000541005 TMEM88BA6NKF7 163 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms