RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 NEMFO60524 1076 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 CBX1P83916 185 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 APOBRQ0VD83 1088 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 LRRC8AQ8IWT6 810 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 GOLPH3LQ9H4A5 285 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 STRCP1A6NGW2 1772 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 MYH15Q9Y2K3 1946 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 LAMA4Q16363 1823 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 ZSCAN20P17040 1043 aaPredicted RBP14.41□□□□□ -0.1
NPC1-202ENST00000540608 UTP14CQ5TAP6 766 aaKnown RBP14.41□□□□□ -0.1
NPC1-202ENST00000540608 LMBR1LQ6UX01 489 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 CCDC73Q6ZRK6 1079 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 ENGASEQ8NFI3 743 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 PAG1Q9NWQ8 432 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 ARFGEF2Q9Y6D5 1785 aa14.41□□□□□ -0.1
NPC1-202ENST00000540608 CABP4P57796 275 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 RBM6P78332 1123 aaKnown RBP14.4□□□□□ -0.1
NPC1-202ENST00000540608 TPD52L1Q16890 204 aaPredicted RBP14.4□□□□□ -0.1
NPC1-202ENST00000540608 PLBD2Q8NHP8 589 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 CHMP4CQ96CF2 233 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 USP28Q96RU2 1077 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 GPR108Q9NPR9 543 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 PRDM10Q9NQV6 1147 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 ABCC6O95255 1503 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 SALL1Q9NSC2 1324 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 GOLIM4O00461 696 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 FOXO4P98177 505 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 DMTNQ08495 405 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 ZMYM1Q5SVZ6 1142 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 ZNF274Q96GC6 653 aaPredicted RBP14.4□□□□□ -0.1
NPC1-202ENST00000540608 FTOQ9C0B1 505 aaKnown RBP eCLIP14.4□□□□□ -0.15e-6■■■■□ 23.7
NPC1-202ENST00000540608 GLI3P10071 1580 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 PKD1L3Q7Z443 1732 aa14.4□□□□□ -0.1
NPC1-202ENST00000540608 KINO60870 393 aaKnown RBP14.39□□□□□ -0.11
NPC1-202ENST00000540608 FAM160A1Q05DH4 1040 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 ANO10Q9NW15 660 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 TNS3Q68CZ2 1445 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 E7EWF7 191 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 H7C1W4 665 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 PDIA3P30101 505 aaKnown RBP14.39□□□□□ -0.11
NPC1-202ENST00000540608 CCT2P78371 535 aaKnown RBP14.39□□□□□ -0.11
NPC1-202ENST00000540608 NCBP1Q09161 790 aaKnown RBP14.39□□□□□ -0.11
NPC1-202ENST00000540608 ATG9AQ7Z3C6 839 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 DHX40Q8IX18 779 aaKnown RBP14.39□□□□□ -0.11
NPC1-202ENST00000540608 NEUROD6Q96NK8 337 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 BECN2A8MW95 431 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 HSPD1P10809 573 aaKnown RBP14.39□□□□□ -0.11
NPC1-202ENST00000540608 FOSBP53539 338 aa14.39□□□□□ -0.11
NPC1-202ENST00000540608 SLFNL1Q499Z3 407 aa14.38□□□□□ -0.11
NPC1-202ENST00000540608 CCDC112Q8NEF3 446 aa14.38□□□□□ -0.11
NPC1-202ENST00000540608 NBPF26B4DH59 902 aa14.38□□□□□ -0.11
NPC1-202ENST00000540608 TIMM10P62072 90 aa14.38□□□□□ -0.11
NPC1-202ENST00000540608 NBPF14Q5TI25 921 aa14.38□□□□□ -0.11
NPC1-202ENST00000540608 NBPF10Q6P3W6 841 aaKnown RBP14.38□□□□□ -0.11
NPC1-202ENST00000540608 ILDR1Q86SU0 546 aaPredicted RBP14.38□□□□□ -0.11
NPC1-202ENST00000540608 FBXL16Q8N461 479 aa14.38□□□□□ -0.11
NPC1-202ENST00000540608 NBPF15Q8N660 670 aa14.38□□□□□ -0.11
NPC1-202ENST00000540608 FEZ1Q99689 392 aa14.38□□□□□ -0.11
NPC1-202ENST00000540608 NCOA5Q9HCD5 579 aaKnown RBP14.38□□□□□ -0.11
NPC1-202ENST00000540608 CCDC9Q9Y3X0 531 aaKnown RBP14.38□□□□□ -0.11
NPC1-202ENST00000540608 IL15P40933 162 aaPredicted RBP14.37□□□□□ -0.11
NPC1-202ENST00000540608 ME1P48163 572 aa14.37□□□□□ -0.11
NPC1-202ENST00000540608 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
NPC1-202ENST00000540608 FSIP1Q8NA03 581 aa14.37□□□□□ -0.11
NPC1-202ENST00000540608 RNF113AO15541 343 aaKnown RBP14.37□□□□□ -0.11
NPC1-202ENST00000540608 U2AF2P26368 475 aaKnown RBP eCLIP14.37□□□□□ -0.113e-11■■□□□ 13.6
NPC1-202ENST00000540608 GTPBP4Q9BZE4 634 aaKnown RBP14.37□□□□□ -0.11
NPC1-202ENST00000540608 NAT10Q9H0A0 1025 aaKnown RBP14.37□□□□□ -0.11
NPC1-202ENST00000540608 SPATA31A3Q5VYP0 1347 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 DCCP43146 1447 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 A0A0G2JLW4 131 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 EVCP57679 992 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 ARID5BQ14865 1188 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 RTEL1Q9NZ71 1219 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 SKILP12757 684 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 ADALQ6DHV7 355 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 CEP57L1Q8IYX8 460 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 FMR1NBQ8N0W7 255 aaPredicted RBP14.36□□□□□ -0.11
NPC1-202ENST00000540608 PCDHA7Q9UN72 937 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 CARMIL3Q8ND23 1372 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 PLEKHG2Q9H7P9 1386 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 LAMB4A4D0S4 1761 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 MAST3O60307 1309 aa14.36□□□□□ -0.11
NPC1-202ENST00000540608 A0A1W2PQ27 194 aa14.35□□□□□ -0.11
NPC1-202ENST00000540608 A0A1W2PQ64 194 aa14.35□□□□□ -0.11
NPC1-202ENST00000540608 A0A1W2PQD8 194 aa14.35□□□□□ -0.11
NPC1-202ENST00000540608 FDPSP14324 419 aaKnown RBP14.35□□□□□ -0.11
NPC1-202ENST00000540608 GUCY1B3Q02153 619 aa14.35□□□□□ -0.11
NPC1-202ENST00000540608 TTLL7Q6ZT98 887 aa14.35□□□□□ -0.11
NPC1-202ENST00000540608 MRPS27Q92552 414 aaKnown RBP14.35□□□□□ -0.11
NPC1-202ENST00000540608 NAP1L2Q9ULW6 460 aaPredicted RBP14.35□□□□□ -0.11
NPC1-202ENST00000540608 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
NPC1-202ENST00000540608 IFIT1P09914 478 aaKnown RBP14.35□□□□□ -0.11
NPC1-202ENST00000540608 NYAP1Q6ZVC0 841 aa14.35□□□□□ -0.11
NPC1-202ENST00000540608 KCND1Q9NSA2 647 aa14.35□□□□□ -0.11
NPC1-202ENST00000540608 CPDO75976 1380 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 CHST3Q7LGC8 479 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 CADPS2Q86UW7 1296 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms