RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 COL13A1Q5TAT6 717 aaPredicted RBP26.52■■□□□ 1.84
CHFR-217ENST00000540537 USP48Q86UV5 1035 aa26.52■■□□□ 1.84
CHFR-217ENST00000540537 TXNRD3Q86VQ6 643 aa26.52■■□□□ 1.84
CHFR-217ENST00000540537 SSH1Q8WYL5 1049 aa26.52■■□□□ 1.84
CHFR-217ENST00000540537 ZNF646O15015 1829 aaPredicted RBP26.51■■□□□ 1.83
CHFR-217ENST00000540537 A0A1B0GUL6 1792 aa26.51■■□□□ 1.83
CHFR-217ENST00000540537 UTYO14607 1347 aa26.51■■□□□ 1.83
CHFR-217ENST00000540537 KCNJ4P48050 445 aa26.51■■□□□ 1.83
CHFR-217ENST00000540537 KRT26Q7Z3Y9 468 aa26.51■■□□□ 1.83
CHFR-217ENST00000540537 SAPCD2Q86UD0 394 aa26.51■■□□□ 1.83
CHFR-217ENST00000540537 DCPSQ96C86 337 aaKnown RBP26.51■■□□□ 1.83
CHFR-217ENST00000540537 CDCA7LQ96GN5 454 aa26.51■■□□□ 1.83
CHFR-217ENST00000540537 THSD7BQ9C0I4 1608 aa26.5■■□□□ 1.83
CHFR-217ENST00000540537 USP17L8P0C7I0 530 aa26.5■■□□□ 1.83
CHFR-217ENST00000540537 DACT2Q5SW24 774 aa26.5■■□□□ 1.83
CHFR-217ENST00000540537 STRIP1Q5VSL9 837 aa26.5■■□□□ 1.83
CHFR-217ENST00000540537 TRMT2AQ8IZ69 625 aaKnown RBP26.5■■□□□ 1.83
CHFR-217ENST00000540537 CAPNS2Q96L46 248 aa26.5■■□□□ 1.83
CHFR-217ENST00000540537 KLRK1P26718 216 aa26.49■■□□□ 1.83
CHFR-217ENST00000540537 ALDH1L2Q3SY69 923 aa26.49■■□□□ 1.83
CHFR-217ENST00000540537 PAXIP1Q6ZW49 1069 aaPredicted RBP26.49■■□□□ 1.83
CHFR-217ENST00000540537 HHIPL1Q96JK4 782 aa26.49■■□□□ 1.83
CHFR-217ENST00000540537 ZNF408Q9H9D4 720 aa26.49■■□□□ 1.83
CHFR-217ENST00000540537 WBP1LQ9NX94 342 aa26.49■■□□□ 1.83
CHFR-217ENST00000540537 MYO3BQ8WXR4 1341 aa26.48■■□□□ 1.83
CHFR-217ENST00000540537 TAF7LQ5H9L4 462 aa26.48■■□□□ 1.83
CHFR-217ENST00000540537 C15orf52Q6ZUT6 534 aaKnown RBP26.48■■□□□ 1.83
CHFR-217ENST00000540537 AIDAQ96BJ3 306 aa26.48■■□□□ 1.83
CHFR-217ENST00000540537 SUCLG2Q96I99 432 aa26.48■■□□□ 1.83
CHFR-217ENST00000540537 MYOZ2Q9NPC6 264 aa26.48■■□□□ 1.83
CHFR-217ENST00000540537 GGA3Q9NZ52 723 aa26.48■■□□□ 1.83
CHFR-217ENST00000540537 IRS2Q9Y4H2 1338 aa26.47■■□□□ 1.83
CHFR-217ENST00000540537 FOXN1O15353 648 aa26.47■■□□□ 1.83
CHFR-217ENST00000540537 NBPF7P0C2Y1 421 aaPredicted RBP26.47■■□□□ 1.83
CHFR-217ENST00000540537 MAP2K1Q02750 393 aaPredicted RBP26.47■■□□□ 1.83
CHFR-217ENST00000540537 CYP4F22Q6NT55 531 aa26.47■■□□□ 1.83
CHFR-217ENST00000540537 TAF5LO75529 589 aa26.46■■□□□ 1.83
CHFR-217ENST00000540537 CT47B1P0C2W7 299 aaPredicted RBP26.46■■□□□ 1.83
CHFR-217ENST00000540537 LDHAL6AQ6ZMR3 332 aa26.46■■□□□ 1.83
CHFR-217ENST00000540537 HELBQ8NG08 1087 aaPredicted RBP26.46■■□□□ 1.83
CHFR-217ENST00000540537 FBXW7Q969H0 707 aa26.46■■□□□ 1.83
CHFR-217ENST00000540537 KAZALD1Q96I82 304 aa26.46■■□□□ 1.83
CHFR-217ENST00000540537 ZNF594Q96JF6 807 aaPredicted RBP26.46■■□□□ 1.83
CHFR-217ENST00000540537 ADM5C9JUS6 153 aa26.45■■□□□ 1.82
CHFR-217ENST00000540537 SCARF1Q14162 830 aa26.45■■□□□ 1.82
CHFR-217ENST00000540537 SULF1Q8IWU6 871 aa26.45■■□□□ 1.82
CHFR-217ENST00000540537 ASTN2O75129 1339 aaPredicted RBP26.44■■□□□ 1.82
CHFR-217ENST00000540537 SNAP23O00161 211 aa26.44■■□□□ 1.82
CHFR-217ENST00000540537 MMP14P50281 582 aa26.44■■□□□ 1.82
CHFR-217ENST00000540537 TTLL5Q6EMB2 1281 aa26.44■■□□□ 1.82
CHFR-217ENST00000540537 DLK2Q6UY11 383 aa26.44■■□□□ 1.82
CHFR-217ENST00000540537 MXD3Q9BW11 206 aa26.44■■□□□ 1.82
CHFR-217ENST00000540537 CD209Q9NNX6 404 aa26.44■■□□□ 1.82
CHFR-217ENST00000540537 CNNM1Q9NRU3 951 aa26.44■■□□□ 1.82
CHFR-217ENST00000540537 PITPNM2Q9BZ72 1349 aa26.43■■□□□ 1.82
CHFR-217ENST00000540537 CTCFP49711 727 aaPredicted RBP26.43■■□□□ 1.82
CHFR-217ENST00000540537 ANGEL2Q5VTE6 544 aaKnown RBP26.43■■□□□ 1.82
CHFR-217ENST00000540537 OGFOD1Q8N543 542 aa26.43■■□□□ 1.82
CHFR-217ENST00000540537 SMC4Q9NTJ3 1288 aa26.43■■□□□ 1.82
CHFR-217ENST00000540537 GRM1Q13255 1194 aa26.42■■□□□ 1.82
CHFR-217ENST00000540537 RABL6Q3YEC7 729 aaPredicted RBP26.42■■□□□ 1.82
CHFR-217ENST00000540537 BICC1Q9H694 974 aaKnown RBP26.42■■□□□ 1.82
CHFR-217ENST00000540537 MAP2K2P36507 400 aa26.41■■□□□ 1.82
CHFR-217ENST00000540537 GTF2IP78347 998 aa26.41■■□□□ 1.82
CHFR-217ENST00000540537 ZNF804AQ7Z570 1209 aa26.41■■□□□ 1.82
CHFR-217ENST00000540537 GBA2Q9HCG7 927 aaPredicted RBP26.41■■□□□ 1.82
CHFR-217ENST00000540537 HUNKP57058 714 aa26.4■■□□□ 1.82
CHFR-217ENST00000540537 TNS4Q8IZW8 715 aa26.4■■□□□ 1.82
CHFR-217ENST00000540537 PRDM10Q9NQV6 1147 aa26.4■■□□□ 1.82
CHFR-217ENST00000540537 IL1R1P14778 569 aa26.39■■□□□ 1.82
CHFR-217ENST00000540537 ANKRD44Q8N8A2 993 aa26.39■■□□□ 1.82
CHFR-217ENST00000540537 C2orf69Q8N8R5 385 aa26.39■■□□□ 1.82
CHFR-217ENST00000540537 USP44Q9H0E7 712 aa26.39■■□□□ 1.82
CHFR-217ENST00000540537 PLIN1O60240 522 aa26.38■■□□□ 1.81
CHFR-217ENST00000540537 AOC2O75106 756 aa26.38■■□□□ 1.81
CHFR-217ENST00000540537 CDCA5Q96FF9 252 aa26.38■■□□□ 1.81
CHFR-217ENST00000540537 BRPF1P55201 1214 aaPredicted RBP26.37■■□□□ 1.81
CHFR-217ENST00000540537 UBE4AQ14139 1066 aa26.37■■□□□ 1.81
CHFR-217ENST00000540537 NBPF9Q3BBW0 867 aa26.37■■□□□ 1.81
CHFR-217ENST00000540537 PUS3Q9BZE2 481 aaKnown RBP26.37■■□□□ 1.81
CHFR-217ENST00000540537 HDAC9Q9UKV0 1011 aa26.37■■□□□ 1.81
CHFR-217ENST00000540537 WNT10BO00744 389 aa26.36■■□□□ 1.81
CHFR-217ENST00000540537 KIAA0825Q8IV33 1275 aa26.36■■□□□ 1.81
CHFR-217ENST00000540537 BEGAINQ9BUH8 593 aa26.36■■□□□ 1.81
CHFR-217ENST00000540537 RIPOR2Q9Y4F9 1068 aa26.36■■□□□ 1.81
CHFR-217ENST00000540537 MROH5Q6ZUA9 1318 aa26.36■■□□□ 1.81
CHFR-217ENST00000540537 HSPA8P11142 646 aaKnown RBP26.34■■□□□ 1.81
CHFR-217ENST00000540537 FKBP1AP62942 108 aaKnown RBP26.34■■□□□ 1.81
CHFR-217ENST00000540537 NOGQ13253 232 aa26.34■■□□□ 1.81
CHFR-217ENST00000540537 RGMBQ6NW40 437 aa26.34■■□□□ 1.81
CHFR-217ENST00000540537 LBX1P52954 281 aa26.33■■□□□ 1.81
CHFR-217ENST00000540537 CERS5Q8N5B7 392 aa26.33■■□□□ 1.81
CHFR-217ENST00000540537 ZBED3Q96IU2 234 aaPredicted RBP26.33■■□□□ 1.81
CHFR-217ENST00000540537 API5Q9BZZ5 524 aaKnown RBP26.33■■□□□ 1.81
CHFR-217ENST00000540537 NOB1Q9ULX3 412 aaKnown RBP26.33■■□□□ 1.81
CHFR-217ENST00000540537 FKBP1BP68106 108 aa26.32■■□□□ 1.8
CHFR-217ENST00000540537 PAPPA2Q9BXP8 1791 aa26.32■■□□□ 1.8
CHFR-217ENST00000540537 SASH1O94885 1247 aa26.31■■□□□ 1.8
CHFR-217ENST00000540537 RARSP54136 660 aaKnown RBP26.3■■□□□ 1.8
CHFR-217ENST00000540537 LRRC24Q50LG9 513 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms