RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 PRO3102Q9H379 93 aa11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 MANSC4A6NHS7 340 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 ECE2O60344 883 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 ARHGEF6Q15052 776 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 CCDC184Q52MB2 194 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 GIGYF2Q6Y7W6 1299 aaKnown RBP11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 ANKRD13DQ6ZTN6 518 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 NGEFQ8N5V2 710 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 AGBL3Q8NEM8 1001 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 EYA3Q99504 573 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 UTP14AQ9BVJ6 771 aaKnown RBP11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 KCNQ5Q9NR82 932 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 RTL9Q8NET4 1388 aa11.63□□□□□ -0.55
TRAPPC1-202ENST00000540486 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
TRAPPC1-202ENST00000540486 SPRYD7Q5W111 196 aa11.62□□□□□ -0.55
TRAPPC1-202ENST00000540486 TTLL7Q6ZT98 887 aa11.62□□□□□ -0.55
TRAPPC1-202ENST00000540486 ARMC9Q7Z3E5 817 aa11.62□□□□□ -0.55
TRAPPC1-202ENST00000540486 CD99L2Q8TCZ2 262 aa11.62□□□□□ -0.55
TRAPPC1-202ENST00000540486 DPF3Q92784 378 aa11.62□□□□□ -0.55
TRAPPC1-202ENST00000540486 PLEKHF1Q96S99 279 aa11.62□□□□□ -0.55
TRAPPC1-202ENST00000540486 NSFL1CQ9UNZ2 370 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-202ENST00000540486 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
TRAPPC1-202ENST00000540486 SP3Q02447 781 aa11.61□□□□□ -0.55
TRAPPC1-202ENST00000540486 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
TRAPPC1-202ENST00000540486 SLC9C1Q4G0N8 1177 aa11.61□□□□□ -0.55
TRAPPC1-202ENST00000540486 OTUD7BQ6GQQ9 843 aa11.61□□□□□ -0.55
TRAPPC1-202ENST00000540486 GPR153Q6NV75 609 aa11.61□□□□□ -0.55
TRAPPC1-202ENST00000540486 COL25A1Q9BXS0 654 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-202ENST00000540486 ZBTB3Q9H5J0 574 aa11.61□□□□□ -0.55
TRAPPC1-202ENST00000540486 DOK7Q18PE1 504 aa11.6□□□□□ -0.55
TRAPPC1-202ENST00000540486 LDLRAD1Q5T700 205 aa11.6□□□□□ -0.55
TRAPPC1-202ENST00000540486 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
TRAPPC1-202ENST00000540486 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
TRAPPC1-202ENST00000540486 MYOZ2Q9NPC6 264 aa11.6□□□□□ -0.55
TRAPPC1-202ENST00000540486 POLLQ9UGP5 575 aa11.6□□□□□ -0.55
TRAPPC1-202ENST00000540486 RRP7AQ9Y3A4 280 aaKnown RBP11.6□□□□□ -0.55
TRAPPC1-202ENST00000540486 ZNF609O15014 1411 aa11.6□□□□□ -0.55
TRAPPC1-202ENST00000540486 USP17L8P0C7I0 530 aa11.59□□□□□ -0.55
TRAPPC1-202ENST00000540486 ZBTB48P10074 688 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC1-202ENST00000540486 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC1-202ENST00000540486 PRAMEF18Q5VWM3 479 aa11.59□□□□□ -0.55
TRAPPC1-202ENST00000540486 RSBN1LQ6PCB5 846 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC1-202ENST00000540486 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
TRAPPC1-202ENST00000540486 NR2E3Q9Y5X4 410 aa11.59□□□□□ -0.55
TRAPPC1-202ENST00000540486 NUP98P52948 1817 aa11.58□□□□□ -0.56
TRAPPC1-202ENST00000540486 ANP32CO43423 234 aa11.58□□□□□ -0.56
TRAPPC1-202ENST00000540486 SLC10A4Q96EP9 437 aa11.58□□□□□ -0.56
TRAPPC1-202ENST00000540486 HTATIP2Q9BUP3 242 aa11.58□□□□□ -0.56
TRAPPC1-202ENST00000540486 ZC3H12CQ9C0D7 883 aaKnown RBP11.58□□□□□ -0.56
TRAPPC1-202ENST00000540486 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
TRAPPC1-202ENST00000540486 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
TRAPPC1-202ENST00000540486 WTIPA6NIX2 430 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-202ENST00000540486 G3V3G9 751 aa11.57□□□□□ -0.56
TRAPPC1-202ENST00000540486 IGF2BP3O00425 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAPPC1-202ENST00000540486 STK25O00506 426 aa11.57□□□□□ -0.56
TRAPPC1-202ENST00000540486 HCLS1P14317 486 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-202ENST00000540486 CRHR2Q13324 411 aa11.57□□□□□ -0.56
TRAPPC1-202ENST00000540486 TAF7Q15545 349 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-202ENST00000540486 GMLQ99445 158 aa11.57□□□□□ -0.56
TRAPPC1-202ENST00000540486 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 SOX1O00570 391 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 HTATSF1O43719 755 aaKnown RBP11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 MYL6BP14649 208 aa11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 NKX2-3Q8TAU0 364 aa11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 TBC1D16Q8TBP0 767 aa11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 LRCH3Q96II8 777 aa11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 SCAF8Q9UPN6 1271 aaKnown RBP11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 PTCH2Q9Y6C5 1203 aa11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 LAMA3Q16787 3333 aa11.56□□□□□ -0.56
TRAPPC1-202ENST00000540486 GPSM2P81274 684 aa11.55□□□□□ -0.56
TRAPPC1-202ENST00000540486 DCTN1Q14203 1278 aa11.55□□□□□ -0.56
TRAPPC1-202ENST00000540486 NBPF9Q3BBW0 867 aa11.55□□□□□ -0.56
TRAPPC1-202ENST00000540486 MCM10Q7L590 875 aa11.55□□□□□ -0.56
TRAPPC1-202ENST00000540486 PNNQ9H307 717 aaKnown RBP11.55□□□□□ -0.56
TRAPPC1-202ENST00000540486 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 MMP14P50281 582 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 CAP1Q01518 475 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 PRKG1Q13976 671 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 MAP3K11Q16584 847 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 HSP90AB3PQ58FF7 597 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 DEFB123Q8N688 67 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 PNISRQ8TF01 805 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 WNK4Q96J92 1243 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 PRDM6Q9NQX0 595 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 PODXL2Q9NZ53 605 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 TRMT112Q9UI30 125 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 ANGEL1Q9UNK9 670 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 SH3TC1Q8TE82 1336 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 UNC80Q8N2C7 3258 aa11.54□□□□□ -0.56
TRAPPC1-202ENST00000540486 TESPA1A2RU30 521 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC1-202ENST00000540486 WDR43Q15061 677 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRAPPC1-202ENST00000540486 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
TRAPPC1-202ENST00000540486 NLRP10Q86W26 655 aa11.53□□□□□ -0.56
TRAPPC1-202ENST00000540486 OGFOD1Q8N543 542 aa11.53□□□□□ -0.56
TRAPPC1-202ENST00000540486 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms